RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 PPP1R17O96001 155 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 PPBPP02775 128 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 TRGC2P03986 189 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 COA6Q5JTJ3 125 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 AMMECR1LQ6DCA0 310 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 SPATA12Q7Z6I5 190 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 BAALCQ8WXS3 180 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 TRAV9-1A0A075B6T8 112 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 LRCOL1A6NCL2 159 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 CRPP02741 224 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 NDUFA6P56556 154 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 REG3AQ06141 175 aa10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-214ENST00000512234 DNAH5Q8TE73 4624 aa10.18□□□□□ -0.78
SQSTM1-214ENST00000512234 HIST3H2BBQ8N257 126 aa10.18□□□□□ -0.78
SQSTM1-214ENST00000512234 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
SQSTM1-214ENST00000512234 A0A1B0GUV1 79 aa10.17□□□□□ -0.78
SQSTM1-214ENST00000512234 BTF3P20290 206 aaKnown RBP10.17□□□□□ -0.78
SQSTM1-214ENST00000512234 GNB1LQ9BYB4 327 aa10.17□□□□□ -0.78
SQSTM1-214ENST00000512234 MRPL18Q9H0U6 180 aaKnown RBP10.17□□□□□ -0.78
SQSTM1-214ENST00000512234 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
SQSTM1-214ENST00000512234 IFITM10A6NMD0 228 aa10.16□□□□□ -0.78
SQSTM1-214ENST00000512234 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
SQSTM1-214ENST00000512234 HLA-DQA1P01909 254 aa10.16□□□□□ -0.78
SQSTM1-214ENST00000512234 IFI27P40305 119 aaPredicted RBP10.15□□□□□ -0.78
SQSTM1-214ENST00000512234 PKIAP61925 76 aa10.15□□□□□ -0.78
SQSTM1-214ENST00000512234 RPL32P62910 135 aaKnown RBP10.15□□□□□ -0.78
SQSTM1-214ENST00000512234 KRTAP26-1Q6PEX3 210 aa10.15□□□□□ -0.78
SQSTM1-214ENST00000512234 C1orf43Q9BWL3 253 aa10.15□□□□□ -0.78
SQSTM1-214ENST00000512234 MAP1LC3AQ9H492 121 aa10.15□□□□□ -0.78
SQSTM1-214ENST00000512234 Q0VG73 95 aa10.14□□□□□ -0.79
SQSTM1-214ENST00000512234 ALKBH7Q9BT30 221 aaPredicted RBP10.14□□□□□ -0.79
SQSTM1-214ENST00000512234 TM2D2Q9BX73 214 aa10.14□□□□□ -0.79
SQSTM1-214ENST00000512234 PYY3Q5JQD4 70 aa10.13□□□□□ -0.79
SQSTM1-214ENST00000512234 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
SQSTM1-214ENST00000512234 LRP1BQ9NZR2 4599 aa10.13□□□□□ -0.79
SQSTM1-214ENST00000512234 MIAQ16674 131 aa10.13□□□□□ -0.79
SQSTM1-214ENST00000512234 OR5A1Q8NGJ0 315 aa10.13□□□□□ -0.79
SQSTM1-214ENST00000512234 FAM104AQ969W3 186 aa10.13□□□□□ -0.79
SQSTM1-214ENST00000512234 TRAPPC1Q9Y5R8 145 aa10.13□□□□□ -0.79
SQSTM1-214ENST00000512234 KIAA1109Q2LD37 5005 aa10.12□□□□□ -0.79
SQSTM1-214ENST00000512234 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.12□□□□□ -0.79
SQSTM1-214ENST00000512234 PRSS47A8MTI9 375 aa10.12□□□□□ -0.79
SQSTM1-214ENST00000512234 H7C423 109 aa10.12□□□□□ -0.79
SQSTM1-214ENST00000512234 Q6ZUT4 128 aa10.12□□□□□ -0.79
SQSTM1-214ENST00000512234 Q8N8P6 123 aa10.12□□□□□ -0.79
SQSTM1-214ENST00000512234 TMEM101Q96IK0 257 aa10.12□□□□□ -0.79
SQSTM1-214ENST00000512234 CDC42SE2Q9NRR3 84 aa10.12□□□□□ -0.79
SQSTM1-214ENST00000512234 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
SQSTM1-214ENST00000512234 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
SQSTM1-214ENST00000512234 MRPL52Q86TS9 123 aaKnown RBP10.11□□□□□ -0.79
SQSTM1-214ENST00000512234 RMI2Q96E14 147 aa10.11□□□□□ -0.79
SQSTM1-214ENST00000512234 LAMTOR2Q9Y2Q5 125 aa10.11□□□□□ -0.79
SQSTM1-214ENST00000512234 LINC00587B1AMM8 73 aa10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 ZNF664Q8N3J9 261 aa10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 Q8N814 137 aa10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 OR10D4PQ8NGN7 298 aa10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 GAGE12HA6NDE8 117 aa10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 LINC01620Q4KN68 170 aa10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 ZC2HC1BQ5TFG8 222 aa10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 HIST1H2BLQ99880 126 aa10.1□□□□□ -0.79
SQSTM1-214ENST00000512234 EREGO14944 169 aa10.09□□□□□ -0.79
SQSTM1-214ENST00000512234 MT-ND6P03923 174 aa10.09□□□□□ -0.79
SQSTM1-214ENST00000512234 ZNF25P17030 456 aaPredicted RBP10.09□□□□□ -0.79
SQSTM1-214ENST00000512234 CHCHD10Q8WYQ3 142 aaPredicted RBP10.09□□□□□ -0.79
SQSTM1-214ENST00000512234 LINC00959A0A1B0GUT2 108 aa10.08□□□□□ -0.8
SQSTM1-214ENST00000512234 XCL1P47992 114 aa10.08□□□□□ -0.8
SQSTM1-214ENST00000512234 PRSS3P2Q8NHM4 247 aa10.08□□□□□ -0.8
SQSTM1-214ENST00000512234 TRAV13-1A0A0B4J241 112 aa10.07□□□□□ -0.8
SQSTM1-214ENST00000512234 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
SQSTM1-214ENST00000512234 FABP4P15090 132 aa10.07□□□□□ -0.8
SQSTM1-214ENST00000512234 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
SQSTM1-214ENST00000512234 COX19Q49B96 90 aa10.07□□□□□ -0.8
SQSTM1-214ENST00000512234 COX11Q9Y6N1 276 aa10.07□□□□□ -0.8
SQSTM1-214ENST00000512234 CCL25O15444 150 aa10.07□□□□□ -0.8
SQSTM1-214ENST00000512234 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
SQSTM1-214ENST00000512234 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
SQSTM1-214ENST00000512234 NXT2Q9NPJ8 142 aaKnown RBP10.06□□□□□ -0.8
SQSTM1-214ENST00000512234 IGLV5-52A0A0A0MRZ9 124 aa10.05□□□□□ -0.8
SQSTM1-214ENST00000512234 TRAV8-4A0A0B4J246 113 aa10.05□□□□□ -0.8
SQSTM1-214ENST00000512234 KRTAP10-1P60331 282 aa10.05□□□□□ -0.8
SQSTM1-214ENST00000512234 NTN5Q8WTR8 489 aaPredicted RBP10.05□□□□□ -0.8
SQSTM1-214ENST00000512234 TMEM18Q96B42 140 aa10.05□□□□□ -0.8
SQSTM1-214ENST00000512234 PRSS1P07477 247 aa10.04□□□□□ -0.8
SQSTM1-214ENST00000512234 C18orf32Q8TCD1 76 aa10.04□□□□□ -0.8
SQSTM1-214ENST00000512234 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
SQSTM1-214ENST00000512234 FOXI1Q12951 378 aa10.04□□□□□ -0.8
SQSTM1-214ENST00000512234 PMCHL1Q16048 86 aa10.04□□□□□ -0.8
SQSTM1-214ENST00000512234 TIMM21Q9BVV7 248 aa10.04□□□□□ -0.8
SQSTM1-214ENST00000512234 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
SQSTM1-214ENST00000512234 CSDC2Q9Y534 153 aaKnown RBP10.04□□□□□ -0.8
SQSTM1-214ENST00000512234 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
SQSTM1-214ENST00000512234 HAMPP81172 84 aa10.03□□□□□ -0.8
SQSTM1-214ENST00000512234 ORMDL2Q53FV1 153 aa10.03□□□□□ -0.8
SQSTM1-214ENST00000512234 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
SQSTM1-214ENST00000512234 CYSLTR1Q9Y271 337 aa10.03□□□□□ -0.8
SQSTM1-214ENST00000512234 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 257.4 ms