RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TRBV7-1A0A0A6YYK4 115 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRBV10-2A0A0K0K1G8 114 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 H3BMG7 143 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 ATOX1O00244 68 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 EGFEM1PQ0D2K5 195 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC00528Q8N1L1 170 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 LYPD1Q8N2G4 141 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 ATP6V0E2Q8NHE4 81 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 DCANP1Q8TF63 244 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 C9orf85Q96MD7 179 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 PRR13Q9NZ81 148 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC00527Q9UJ94 153 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRAV12-1A0A0B4J245 112 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV1-24A0A0C4DH33 117 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV2-70DA0A0C4DH43 119 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 H3BQ15 152 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 H3BUT2 72 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 AVPP01185 164 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV3-53P01767 116 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 MT-ATP8P03928 68 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 CDAP32320 146 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 CRYBA4P53673 196 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 HILS1P60008 231 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 TMEM155Q4W5P6 130 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 SPATA45Q537H7 98 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 SPINK14Q6IE38 97 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 CYP2G1PQ6ZSU1 146 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC01560Q8TB33 94 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 GTSF1Q8WW33 167 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 GAFA1Q96PS6 74 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 FNDC4Q9H6D8 234 aaPredicted RBP1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 U3KQE9 123 aa1.26□□□□□ -2.21
TRAPPC13-211ENST00000512009 TRBV19A0A075B6N1 114 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV3OR16-10A0A075B7F0 116 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 CENPVL3A0A0U1RRI6 287 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 hDV103S1A0JD37 113 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGKCP01834 107 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC01545Q5VT33 79 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 PPDPFLQ8WWR9 84 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q96MF0 132 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 PRO1933Q9H354 126 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 PSG8Q9UQ74 426 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A0G2JMM0 328 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 GAGE12BA1L429 117 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 PINLYPA6NC86 204 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 A6NED7 52 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM223BA6NKX1 122 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 CCL25O15444 150 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 SERF1AO75920 110 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 MSMBP08118 114 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 RNASE2P10153 161 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 NPC2P61916 151 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 PATE2Q6UY27 113 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 FOXI2Q6ZQN5 318 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q6ZVH6 145 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM223AQ8IWN6 122 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 TMEM254Q8TBM7 123 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 TMEM14BQ9NUH8 114 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGHV3-15A0A0B4J1V0 119 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A1B0GVY2 172 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 hDV102S1A0JD36 115 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 SH2D1AO60880 128 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 NDUFA3O95167 84 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 IGKV1-16P04430 117 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 LINC00205P59089 165 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 RPL18AQ02543 176 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 ASPHD1Q5U4P2 390 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 COX6B2Q6YFQ2 88 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 TPRX1Q8N7U7 411 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 C11orf45Q8TAV5 145 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 DIRC1Q969H9 104 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 TTTY12Q9BZ98 90 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 LY96Q9Y6Y9 160 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 A0A1W2PPB8 328 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 KIR3DP1A8MWS1 328 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 M0R1W7 72 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 SNRPCP09234 159 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 MED14OSP0DP75 135 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 GCHFRP30047 84 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 LMO4P61968 165 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 LUZP6Q538Z0 58 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 BRD3OSQ6XYD6 125 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 FAM216BQ8N7L0 139 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 Q8N9W7 124 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 KLF14Q8TD94 323 aaPredicted RBP1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 C20orf78Q9BR46 151 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 TSSC4Q9Y5U2 329 aaPredicted RBP1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 KIF25-AS1Q9Y6Z4 181 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 NUPR2A6NF83 97 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 CTSGP08311 255 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 GP9P14770 177 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 GYPEP15421 78 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 RPL28P46779 137 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 UBE2V1Q13404 147 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 CDSNQ15517 529 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 SLC25A29Q8N8R3 303 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 DEFB105AQ8NG35 78 aa1.25□□□□□ -2.21
TRAPPC13-211ENST00000512009 SRXN1Q9BYN0 137 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms