RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 S100A10P60903 97 aa0.38□□□□□ -2.35
PDGFC-207ENST00000511985 NCMAPQ5T1S8 102 aa0.38□□□□□ -2.35
PDGFC-207ENST00000511985 TMEM170BQ5T4T1 132 aa0.38□□□□□ -2.35
PDGFC-207ENST00000511985 MANBALQ9NQG1 85 aa0.38□□□□□ -2.35
PDGFC-207ENST00000511985 PRO1854Q9UHT4 67 aa0.38□□□□□ -2.35
PDGFC-207ENST00000511985 SPHKAPQ2M3C7 1700 aa0.38□□□□□ -2.35
PDGFC-207ENST00000511985 NWD2Q9ULI1 1742 aa0.38□□□□□ -2.35
PDGFC-207ENST00000511985 ZNF609O15014 1411 aa0.38□□□□□ -2.35
PDGFC-207ENST00000511985 TANC1Q9C0D5 1861 aa0.37□□□□□ -2.35
PDGFC-207ENST00000511985 SIPA1L3O60292 1781 aaPredicted RBP0.37□□□□□ -2.35
PDGFC-207ENST00000511985 TEX14Q8IWB6 1497 aa0.37□□□□□ -2.35
PDGFC-207ENST00000511985 hADV29S1A0JD25 119 aa0.37□□□□□ -2.35
PDGFC-207ENST00000511985 APOC3P02656 99 aa0.37□□□□□ -2.35
PDGFC-207ENST00000511985 COX6CP09669 75 aa0.37□□□□□ -2.35
PDGFC-207ENST00000511985 UBE2DNLQ8IWF7 75 aa0.37□□□□□ -2.35
PDGFC-207ENST00000511985 NXT2Q9NPJ8 142 aaKnown RBP0.37□□□□□ -2.35
PDGFC-207ENST00000511985 TNS1Q9HBL0 1735 aaKnown RBP0.37□□□□□ -2.35
PDGFC-207ENST00000511985 HMGXB3Q12766 1538 aa0.37□□□□□ -2.35
PDGFC-207ENST00000511985 PLXNA1Q9UIW2 1896 aa0.37□□□□□ -2.35
PDGFC-207ENST00000511985 KIAA0100Q14667 2235 aaKnown RBP0.37□□□□□ -2.35
PDGFC-207ENST00000511985 MAP2P11137 1827 aaKnown RBP0.36□□□□□ -2.35
PDGFC-207ENST00000511985 CRYM-AS1A6NIL9 109 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 C10orf142B7Z368 130 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 GNGT2O14610 69 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 NDUFC1O43677 76 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 MT-ATP8P03928 68 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 LINC00032P0C843 101 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 IGLC1P0CG04 106 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 PKIAP61925 76 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 SEC11AP67812 179 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 SPRR4Q96PI1 79 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 DPY30Q9C005 99 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 NPVFQ9HCQ7 196 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 AP4S1Q9Y587 144 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 PRDM15P57071 1507 aaPredicted RBP0.36□□□□□ -2.35
PDGFC-207ENST00000511985 MYOM1P52179 1685 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 PTPRZ1P23471 2315 aaPredicted RBP0.36□□□□□ -2.35
PDGFC-207ENST00000511985 UNC13BO14795 1591 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 DIP2CQ9Y2E4 1556 aa0.36□□□□□ -2.35
PDGFC-207ENST00000511985 MAST4O15021 2626 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 ABCC10Q5T3U5 1492 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 TPRP12270 2363 aaKnown RBP0.35□□□□□ -2.35
PDGFC-207ENST00000511985 JMJD1CQ15652 2540 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 EHBP1L1Q8N3D4 1523 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 ZNF815PA8K554 130 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 MGPP08493 103 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 COX6A2Q02221 97 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 SSBP3-AS1Q7Z2R9 100 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 FAM223AQ8IWN6 122 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 SNHG12Q9BXW3 62 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 ARL2-SNX15V9GYD0 113 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 GAPVD1Q14C86 1478 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 SHANK2Q9UPX8 1470 aa0.35□□□□□ -2.35
PDGFC-207ENST00000511985 PIEZO1Q92508 2521 aa0.34□□□□□ -2.35
PDGFC-207ENST00000511985 ANKRD36BQ8N2N9 1353 aa0.34□□□□□ -2.35
PDGFC-207ENST00000511985 TRAPPC2P0DI81 140 aa0.34□□□□□ -2.36
PDGFC-207ENST00000511985 TRAPPC2BP0DI82 140 aa0.34□□□□□ -2.36
PDGFC-207ENST00000511985 SAA2P0DJI9 122 aaPredicted RBP0.34□□□□□ -2.36
PDGFC-207ENST00000511985 COL5A1-AS1Q5SY13 56 aa0.34□□□□□ -2.36
PDGFC-207ENST00000511985 Q6JHZ5 121 aa0.34□□□□□ -2.36
PDGFC-207ENST00000511985 TMEM263Q8WUH6 116 aaKnown RBP0.34□□□□□ -2.36
PDGFC-207ENST00000511985 FAIMQ9NVQ4 179 aa0.34□□□□□ -2.36
PDGFC-207ENST00000511985 IFT172Q9UG01 1749 aa0.34□□□□□ -2.36
PDGFC-207ENST00000511985 ZFYVE26Q68DK2 2539 aa0.34□□□□□ -2.36
PDGFC-207ENST00000511985 MYH7P12883 1935 aa0.34□□□□□ -2.36
PDGFC-207ENST00000511985 PRDM2Q13029 1718 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 ARHGEF5Q12774 1597 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 NSD3Q9BZ95 1437 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 A0A0D9SFI3 127 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 FAM223BA6NKX1 122 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 H7BZZ5 65 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 ATOX1O00244 68 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 UBA52P62987 128 aaKnown RBP0.33□□□□□ -2.36
PDGFC-207ENST00000511985 HAMPP81172 84 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 SFTA2Q6UW10 78 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 PMCHL2Q9BQD1 86 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 CNFNQ9BYD5 112 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 CACFD1Q9UGQ2 172 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 ADGRL2O95490 1459 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 MAGI1Q96QZ7 1491 aaPredicted RBP0.33□□□□□ -2.36
PDGFC-207ENST00000511985 FYCO1Q9BQS8 1478 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 PATJQ8NI35 1801 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 CACNA1HO95180 2353 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 LRRC37A2A6NM11 1700 aa0.33□□□□□ -2.36
PDGFC-207ENST00000511985 TROQ12816 1431 aaPredicted RBP0.32□□□□□ -2.36
PDGFC-207ENST00000511985 CC2D2AQ9P2K1 1620 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 MYO7AQ13402 2215 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 TRBV7-7A0A0K0K1E9 115 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 M0R3E3 92 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 BCE1O60756 84 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 S100A3P33764 101 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 SERP2Q8N6R1 65 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 TRGV9Q99603 122 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 LINC00846Q9NV44 126 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 DOCK1Q14185 1865 aa0.32□□□□□ -2.36
PDGFC-207ENST00000511985 TTC28Q96AY4 2481 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 MLH3Q9UHC1 1453 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 TRBV25-1A0A075B6N4 114 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 A0A0G2JND7 137 aa0.31□□□□□ -2.36
PDGFC-207ENST00000511985 A0A1B0GWA3 101 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms