RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 TRAV13-2A0A0B4J235 113 aa6.53□□□□□ -1.36
SNF8-210ENST00000511214 INAFM2P0DMQ5 153 aa6.53□□□□□ -1.36
SNF8-210ENST00000511214 CXCL5P42830 114 aa6.53□□□□□ -1.36
SNF8-210ENST00000511214 SLURP1P55000 103 aa6.53□□□□□ -1.36
SNF8-210ENST00000511214 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
SNF8-210ENST00000511214 DYNLRB2Q8TF09 96 aa6.53□□□□□ -1.36
SNF8-210ENST00000511214 TMEM126AQ9H061 195 aa6.53□□□□□ -1.36
SNF8-210ENST00000511214 SS18L2Q9UHA2 77 aa6.53□□□□□ -1.36
SNF8-210ENST00000511214 DCHS1Q96JQ0 3298 aa6.52□□□□□ -1.36
SNF8-210ENST00000511214 CFAP47Q6ZTR5 3102 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 KALRNO60229 2985 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 IGHV3-38A0A0C4DH36 116 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 F5H768 121 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 K7EQD1 137 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 CMC4P56277 68 aaPredicted RBP6.52□□□□□ -1.37
SNF8-210ENST00000511214 NPC2P61916 151 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 COX6A2Q02221 97 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 DEFB114Q30KQ6 69 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 LCE2AQ5TA79 106 aaPredicted RBP6.52□□□□□ -1.37
SNF8-210ENST00000511214 Q6ZSV7 163 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.52□□□□□ -1.37
SNF8-210ENST00000511214 CDC42SE2Q9NRR3 84 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 DMXL2Q8TDJ6 3036 aa6.52□□□□□ -1.37
SNF8-210ENST00000511214 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
SNF8-210ENST00000511214 MEIG1Q5JSS6 88 aa6.51□□□□□ -1.37
SNF8-210ENST00000511214 HIST2H2BCQ6DN03 193 aa6.51□□□□□ -1.37
SNF8-210ENST00000511214 HIST2H2BDQ6DRA6 164 aa6.51□□□□□ -1.37
SNF8-210ENST00000511214 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
SNF8-210ENST00000511214 PRIMA1Q86XR5 153 aa6.51□□□□□ -1.37
SNF8-210ENST00000511214 Q9UF83 564 aa6.51□□□□□ -1.37
SNF8-210ENST00000511214 HIVEP3Q5T1R4 2406 aa6.5□□□□□ -1.37
SNF8-210ENST00000511214 SPTBN1Q01082 2364 aaKnown RBP6.5□□□□□ -1.37
SNF8-210ENST00000511214 NACAE9PAV3 2078 aa6.5□□□□□ -1.37
SNF8-210ENST00000511214 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
SNF8-210ENST00000511214 TMEM86BQ8N661 226 aa6.5□□□□□ -1.37
SNF8-210ENST00000511214 FAM110AQ9BQ89 295 aa6.5□□□□□ -1.37
SNF8-210ENST00000511214 DOPEY2Q9Y3R5 2298 aa6.5□□□□□ -1.37
SNF8-210ENST00000511214 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
SNF8-210ENST00000511214 TMEM243Q9BU79 118 aa6.49□□□□□ -1.37
SNF8-210ENST00000511214 COL6A6A6NMZ7 2263 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 TRGV1A0A0A0MS02 117 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 H0YGX0 51 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 UBE2L6O14933 153 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 CRPP02741 224 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 LINC00694P0DN24 101 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 IGHV4-31P0DP07 118 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 NTM-AS1Q6ZSK4 140 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 STHQ8IWL8 128 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 DCHS2Q6V1P9 2916 aa6.48□□□□□ -1.37
SNF8-210ENST00000511214 TRAV13-1A0A0B4J241 112 aa6.47□□□□□ -1.37
SNF8-210ENST00000511214 PRM2P04554 102 aa6.47□□□□□ -1.37
SNF8-210ENST00000511214 MALP21145 153 aa6.47□□□□□ -1.37
SNF8-210ENST00000511214 DEFB136Q30KP8 78 aa6.47□□□□□ -1.37
SNF8-210ENST00000511214 ODF3L2Q3SX64 289 aa6.47□□□□□ -1.37
SNF8-210ENST00000511214 C5orf38Q86SI9 138 aa6.47□□□□□ -1.37
SNF8-210ENST00000511214 COX7B2Q8TF08 81 aa6.47□□□□□ -1.37
SNF8-210ENST00000511214 TACC2O95359 2948 aa6.46□□□□□ -1.37
SNF8-210ENST00000511214 TRBV6-4A0A1B0GX49 114 aa6.46□□□□□ -1.38
SNF8-210ENST00000511214 ATMQ13315 3056 aa6.46□□□□□ -1.38
SNF8-210ENST00000511214 C18orf65Q6ZTR6 163 aa6.46□□□□□ -1.38
SNF8-210ENST00000511214 C16orf74Q96GX8 76 aa6.46□□□□□ -1.38
SNF8-210ENST00000511214 XCL2Q9UBD3 114 aa6.46□□□□□ -1.38
SNF8-210ENST00000511214 CEP295Q9C0D2 2601 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 FAM236AA0A1B0GUQ0 79 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 FAM236BA0A1B0GV22 79 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 IBA57-AS1B1ANH7 110 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 UQCRQO14949 82 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 LRRC75A-AS1Q8N1F1 130 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 C3orf22Q8N5N4 141 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 OBSCN-AS1Q96MR7 158 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 CHCHD5Q9BSY4 110 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 C22orf24Q9Y442 160 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 LRBAP50851 2863 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 ASPMQ8IZT6 3477 aa6.45□□□□□ -1.38
SNF8-210ENST00000511214 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.44□□□□□ -1.382e-11■■■■■ 27.1
SNF8-210ENST00000511214 NCOR2Q9Y618 2525 aa6.44□□□□□ -1.38
SNF8-210ENST00000511214 LINC01561Q8N1V8 128 aa6.44□□□□□ -1.38
SNF8-210ENST00000511214 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
SNF8-210ENST00000511214 FAM218AQ96MZ4 157 aa6.44□□□□□ -1.38
SNF8-210ENST00000511214 SND1-IT1Q9HBX3 110 aa6.44□□□□□ -1.38
SNF8-210ENST00000511214 CACNA1AO00555 2505 aa6.44□□□□□ -1.38
SNF8-210ENST00000511214 A0A0U1RRA0 63 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 A0A1B0GX51 115 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 ATOX1O00244 68 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 DNAL4O96015 105 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 HIST1H4AP62805 103 aaKnown RBP6.43□□□□□ -1.38
SNF8-210ENST00000511214 TNP2Q05952 138 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 Q6ZTI0 123 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 MIR7-3HGQ8N6C7 128 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 LINC00526Q96FQ7 95 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 Q96MF0 132 aa6.43□□□□□ -1.38
SNF8-210ENST00000511214 SPTAN1Q13813 2472 aaKnown RBP6.42□□□□□ -1.38
SNF8-210ENST00000511214 NBASA2RRP1 2371 aa6.42□□□□□ -1.38
SNF8-210ENST00000511214 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
SNF8-210ENST00000511214 A0A087WZ39 114 aa6.42□□□□□ -1.38
SNF8-210ENST00000511214 WIPF1O43516 503 aa6.42□□□□□ -1.38
SNF8-210ENST00000511214 NDUFA7O95182 113 aa6.42□□□□□ -1.38
SNF8-210ENST00000511214 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
SNF8-210ENST00000511214 Q6JHZ5 121 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms