RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PNRC1Q12796 327 aaPredicted RBP1.94□□□□□ -2.1
CLOCK-209ENST00000511124 CD164L2Q6UWJ8 174 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 C14orf178Q8N769 122 aaPredicted RBP1.94□□□□□ -2.1
CLOCK-209ENST00000511124 C9orf163Q8N9P6 203 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 PRSS3P2Q8NHM4 247 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 C20orf78Q9BR46 151 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 TIMM21Q9BVV7 248 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 SEC11CQ9BY50 192 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 TOMM7Q9P0U1 55 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 FAT3Q8TDW7 4589 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 CRXO43186 299 aaPredicted RBP1.94□□□□□ -2.1
CLOCK-209ENST00000511124 SCO1O75880 301 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 SNRPCP09234 159 aaKnown RBP1.94□□□□□ -2.1
CLOCK-209ENST00000511124 CRYGAP11844 174 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 UBE2D3P61077 147 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 UBE2D2P62837 147 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 MEF2BQ02080 365 aaPredicted RBP1.94□□□□□ -2.1
CLOCK-209ENST00000511124 UFSP1Q6NVU6 142 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 LINC00269Q8N2A0 174 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 MARVELD1Q9BSK0 173 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 GFRA4Q9GZZ7 299 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 LINC00846Q9NV44 126 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 MDFICQ9P1T7 246 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 HSPG2P98160 4391 aa1.94□□□□□ -2.1
CLOCK-209ENST00000511124 DMXL2Q8TDJ6 3036 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 KRTAP29-1A8MX34 341 aaPredicted RBP1.93□□□□□ -2.1
CLOCK-209ENST00000511124 NDUFB4O95168 129 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 NPSP0C0P6 89 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 PATE2Q6UY27 113 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 LINC01561Q8N1V8 128 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 ORAOV1Q8WV07 137 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 CHCHD10Q8WYQ3 142 aaPredicted RBP1.93□□□□□ -2.1
CLOCK-209ENST00000511124 NHP2Q9NX24 153 aaKnown RBP1.93□□□□□ -2.1
CLOCK-209ENST00000511124 HERC2O95714 4834 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 TRBV30A0A0K0K1B3 111 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 C20orf202A1L168 122 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 FAM74A7A6NL05 159 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 PRSS46E5RG02 174 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 SLC25A20O43772 301 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 SIX6O95475 246 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 VAMP3Q15836 100 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 AKAP14Q86UN6 197 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 MBD3L1Q8WWY6 194 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 CARHSP1Q9Y2V2 147 aaKnown RBP1.93□□□□□ -2.1
CLOCK-209ENST00000511124 STAB2Q8WWQ8 2551 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 KALRNO60229 2985 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 SCO2A0A1W2PP80 73 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 SDHAF1A6NFY7 115 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 PRAC2D3DTV9 90 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 SMR3BP02814 79 aaPredicted RBP1.93□□□□□ -2.1
CLOCK-209ENST00000511124 ADIRFQ15847 76 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 PRR4Q16378 134 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 CENPWQ5EE01 88 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 OSTCQ9NRP0 149 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 NAT8Q9UHE5 227 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 TNXBP22105 4242 aa1.93□□□□□ -2.1
CLOCK-209ENST00000511124 NACAE9PAV3 2078 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 XCL1P47992 114 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 NDUFA6P56556 154 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 GNG5P63218 68 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 LINC01620Q4KN68 170 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 MEIG1Q5JSS6 88 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 ORMDL3Q8N138 153 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 C11orf72Q8NBR9 251 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 C11orf1Q9H5F2 150 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 PRRC2CQ9Y520 2896 aaKnown RBP1.92□□□□□ -2.1
CLOCK-209ENST00000511124 DMXL1Q9Y485 3027 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 CELSR3Q9NYQ7 3312 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 TRAV13-1A0A0B4J241 112 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 ETDCA0A1B0GVM5 59 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 KRBOX1C9JBD0 128 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 GIG44P09565 113 aaPredicted RBP1.92□□□□□ -2.1
CLOCK-209ENST00000511124 ATP5L2Q7Z4Y8 100 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 TMEM141Q96I45 108 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 LIMD2Q9BT23 127 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 TRAV9-1A0A075B6T8 112 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 A0A1B0GV50 99 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 LECT2O14960 151 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 ESDP10768 282 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 CNBPP62633 177 aaKnown RBP1.92□□□□□ -2.1
CLOCK-209ENST00000511124 C1orf137Q5JT78 98 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 PRELID3AQ96N28 172 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 TMEM191AQ9H0A3 160 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 V9GYH0 126 aa1.92□□□□□ -2.1
CLOCK-209ENST00000511124 RAB4AP20338 218 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 OR10AG1Q8NH19 301 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 CLPSL2Q6UWE3 100 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 FAM167A-AS1Q96KT0 104 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 RYR2Q92736 4967 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 LTAP01374 205 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 S100A6P06703 90 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 S100A7L2Q5SY68 101 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 NEXN-AS1Q8NBZ9 246 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 LYPD6BQ8NI32 183 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 KRTAP4-5Q9BYR2 181 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 JPT2Q9H910 190 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 PCLOQ9Y6V0 5065 aa1.91□□□□□ -2.1
CLOCK-209ENST00000511124 SNAI2O43623 268 aa1.9□□□□□ -2.1
CLOCK-209ENST00000511124 DEFB1P60022 68 aa1.9□□□□□ -2.1
CLOCK-209ENST00000511124 PDZD11Q5EBL8 140 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms