RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 H3BNG1 76 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 PHOX2AO14813 284 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 CRYGDP07320 174 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 MGST1P10620 155 aaKnown RBP3.06□□□□□ -1.92
PTPN13-208ENST00000511105 ASIPP42127 132 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 CXCL5P42830 114 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 NKX2-5P52952 324 aaPredicted RBP3.06□□□□□ -1.92
PTPN13-208ENST00000511105 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 WFDC2Q14508 124 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 TDRG1Q3Y452 100 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 SAPCD1Q5SSQ6 148 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 Q6ZRN7 208 aaPredicted RBP3.06□□□□□ -1.92
PTPN13-208ENST00000511105 DAZ4Q86SG3 579 aaKnown RBP3.06□□□□□ -1.92
PTPN13-208ENST00000511105 Q86TA4 180 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 BAGE2Q86Y30 109 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 ATP6V0E2Q8NHE4 81 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 MBD3L1Q8WWY6 194 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 C18orf15Q96N68 181 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 UPK3BQ9BT76 320 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 CHAC1Q9BUX1 264 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 GNG13Q9P2W3 67 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 VAX2Q9UIW0 290 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 LENEPQ9Y5L5 61 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 URGCP-MRPS24S4R325 110 aa3.06□□□□□ -1.92
PTPN13-208ENST00000511105 PKHD1P08F94 4074 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 A0A087WTM6 91 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 A0A0D9SG52 128 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 TMEM262E9PQX1 116 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 PSCAO43653 123 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 SEC11BP0C7V7 166 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 TPT1P13693 172 aaKnown RBP3.05□□□□□ -1.92
PTPN13-208ENST00000511105 EVI2AP22794 236 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 CEBPGP53567 150 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 CACNG7P62955 275 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 OR10AG1Q8NH19 301 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 TXNDC17Q9BRA2 123 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 PRADC1Q9BSG0 188 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 MED9Q9NWA0 146 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 PHLDA3Q9Y5J5 127 aa3.05□□□□□ -1.92
PTPN13-208ENST00000511105 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.04□□□□□ -1.92
PTPN13-208ENST00000511105 TRAV8-6A0A0B4J262 113 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 HMSDA8MTL9 139 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 LTAP01374 205 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 MGPP08493 103 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 RPL35P42766 123 aaKnown RBP3.04□□□□□ -1.92
PTPN13-208ENST00000511105 NMUP48645 174 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 RAB5CP51148 216 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 FOXA3P55318 350 aaPredicted RBP3.04□□□□□ -1.92
PTPN13-208ENST00000511105 TTC32Q5I0X7 151 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 FAM162BQ5T6X4 162 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 HIST1H2BAQ96A08 127 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 SFRP2Q96HF1 295 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 FMC1Q96HJ9 113 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 GTSF1LQ9H1H1 148 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 ZFP30Q9Y2G7 519 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 DNAH8Q96JB1 4490 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 HSPG2P98160 4391 aa3.04□□□□□ -1.92
PTPN13-208ENST00000511105 TRAV8-4A0A0B4J246 113 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 FAM240AA0A1B0GVK7 77 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 TRBV6-4A0A1B0GX49 114 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 M0QXV9 152 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 IGLV2-8P01709 118 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 P01737 135 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 RHOHQ15669 191 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 ZNF56Q15929 161 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 SPANXN1Q5VSR9 72 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 ALKAL2Q6UX46 152 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 MRPL52Q86TS9 123 aaKnown RBP3.03□□□□□ -1.92
PTPN13-208ENST00000511105 UBE2WQ96B02 151 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 RPP21Q9H633 154 aaKnown RBP3.03□□□□□ -1.92
PTPN13-208ENST00000511105 IL36BQ9NZH7 164 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 KLK12Q9UKR0 248 aa3.03□□□□□ -1.92
PTPN13-208ENST00000511105 FAT1Q14517 4588 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 LRCOL1A6NCL2 159 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 A8MWV9 139 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 IBA57-AS1B1ANH7 110 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 SULT1A2P50226 295 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 ZNF345Q14585 488 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 ORMDL2Q53FV1 153 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 CENPWQ5EE01 88 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 LELP1Q5T871 98 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 LYZL1Q6UWQ5 148 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 Q6ZVH6 145 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 SLC7A5P1Q8MH63 180 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 Q8N976 141 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 OR2D3Q8NGH3 330 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 NKX6-2Q9C056 277 aaPredicted RBP3.02□□□□□ -1.93
PTPN13-208ENST00000511105 RNASE7Q9H1E1 156 aaKnown RBP3.02□□□□□ -1.93
PTPN13-208ENST00000511105 KIF25-AS1Q9Y6Z4 181 aa3.02□□□□□ -1.93
PTPN13-208ENST00000511105 TRAV26-2A0A0B4J265 109 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 IGKV3OR2-268A0A0C4DH90 116 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 TRBV6-1A0A0K0K1D8 114 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 UMAD1C9J7I0 102 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 PSPHP1O15172 72 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 UBE2AP49459 152 aa3.01□□□□□ -1.93
PTPN13-208ENST00000511105 GNG4P50150 75 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms