RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 TRAV4A0A0B4J268 109 aa10.24□□□□□ -0.77
AP003555.1-202ENST00000511013 K7EQD1 137 aa10.24□□□□□ -0.77
AP003555.1-202ENST00000511013 IFITM1P13164 125 aa10.24□□□□□ -0.77
AP003555.1-202ENST00000511013 DAZ2Q13117 558 aaKnown RBP10.24□□□□□ -0.77
AP003555.1-202ENST00000511013 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
AP003555.1-202ENST00000511013 WFDC11Q8NEX6 87 aa10.24□□□□□ -0.77
AP003555.1-202ENST00000511013 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
AP003555.1-202ENST00000511013 CSDC2Q9Y534 153 aaKnown RBP10.24□□□□□ -0.77
AP003555.1-202ENST00000511013 WNK1Q9H4A3 2382 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 CHD6Q8TD26 2715 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 TRBV30A0A0K0K1B3 111 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 H7C2G1 150 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 HERVK_113P63121 156 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 ATXN8Q156A1 80 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 HIST2H2BDQ6DRA6 164 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 C11orf44Q8N8P7 122 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 C16orf95Q9H693 158 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 APCP25054 2843 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 EPG5Q9HCE0 2579 aa10.23□□□□□ -0.77
AP003555.1-202ENST00000511013 FAM19A3Q7Z5A8 133 aa10.22□□□□□ -0.77
AP003555.1-202ENST00000511013 NDUFA1O15239 70 aa10.21□□□□□ -0.77
AP003555.1-202ENST00000511013 CIDEAO60543 219 aa10.21□□□□□ -0.77
AP003555.1-202ENST00000511013 CIRBPQ14011 172 aaKnown RBP10.21□□□□□ -0.77
AP003555.1-202ENST00000511013 ADAMTSL4-AS1Q5T5F5 129 aa10.21□□□□□ -0.77
AP003555.1-202ENST00000511013 CITED2Q99967 270 aaPredicted RBP10.21□□□□□ -0.77
AP003555.1-202ENST00000511013 CDKN2A-AS1Q9UH64 79 aa10.21□□□□□ -0.77
AP003555.1-202ENST00000511013 SLC25A20O43772 301 aa10.21□□□□□ -0.78
AP003555.1-202ENST00000511013 TMEM101Q96IK0 257 aa10.21□□□□□ -0.78
AP003555.1-202ENST00000511013 FAM110AQ9BQ89 295 aa10.21□□□□□ -0.78
AP003555.1-202ENST00000511013 SONP18583 2426 aaKnown RBP10.2□□□□□ -0.78
AP003555.1-202ENST00000511013 C9JAW5 83 aa10.2□□□□□ -0.78
AP003555.1-202ENST00000511013 Q6ZTI0 123 aa10.2□□□□□ -0.78
AP003555.1-202ENST00000511013 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
AP003555.1-202ENST00000511013 RNASE1P07998 156 aaKnown RBP10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 COX6CP09669 75 aa10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 IGLV5-39A0A0G2JS06 123 aa10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 A8MZ25 164 aa10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 ANKRD29Q8N6D5 301 aa10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 LINC01006Q8NI28 216 aa10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 C16orf74Q96GX8 76 aa10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
AP003555.1-202ENST00000511013 LINC00242Q5T6M2 205 aa10.18□□□□□ -0.78
AP003555.1-202ENST00000511013 NOP10Q9NPE3 64 aaKnown RBP10.18□□□□□ -0.78
AP003555.1-202ENST00000511013 TMEM262E9PQX1 116 aa10.17□□□□□ -0.78
AP003555.1-202ENST00000511013 TRIAP1O43715 76 aa10.17□□□□□ -0.78
AP003555.1-202ENST00000511013 COX6A2Q02221 97 aa10.17□□□□□ -0.78
AP003555.1-202ENST00000511013 LINC01620Q4KN68 170 aa10.17□□□□□ -0.78
AP003555.1-202ENST00000511013 ICOSQ9Y6W8 199 aa10.17□□□□□ -0.78
AP003555.1-202ENST00000511013 CSMD2Q7Z408 3487 aa10.17□□□□□ -0.78
AP003555.1-202ENST00000511013 GAGE12JA6NER3 117 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 GAGE4Q13068 117 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 GAGE5Q13069 117 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 NTM-AS1Q6ZSK4 140 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 FLNAP21333 2647 aaKnown RBP10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 H7C423 109 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 IGLV1-51P01701 117 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 LINC00694P0DN24 101 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 TMEM243Q9BU79 118 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 CDIP1Q9H305 208 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 CDC42SE2Q9NRR3 84 aa10.16□□□□□ -0.78
AP003555.1-202ENST00000511013 UBE2L6O14933 153 aa10.15□□□□□ -0.78
AP003555.1-202ENST00000511013 GIG44P09565 113 aaPredicted RBP10.15□□□□□ -0.78
AP003555.1-202ENST00000511013 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.15□□□□□ -0.78
AP003555.1-202ENST00000511013 OVOL2Q9BRP0 275 aa10.15□□□□□ -0.78
AP003555.1-202ENST00000511013 TRGV2A0A075B6R0 118 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 TRBV10-2A0A0K0K1G8 114 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 TRBV6-4A0A1B0GX49 114 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 Q9H8V8 135 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 CCDC168Q8NDH2 2452 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 SMIM1B2RUZ4 78 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 HERV-K104P63124 156 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 KRTAP1-1Q07627 177 aa10.14□□□□□ -0.79
AP003555.1-202ENST00000511013 RPL35AP18077 110 aaKnown RBP10.13□□□□□ -0.79
AP003555.1-202ENST00000511013 NPC2P61916 151 aa10.13□□□□□ -0.79
AP003555.1-202ENST00000511013 C19orf73Q9NVV2 129 aa10.13□□□□□ -0.79
AP003555.1-202ENST00000511013 PLAC8L1A1L4L8 177 aa10.12□□□□□ -0.79
AP003555.1-202ENST00000511013 GAGE7O76087 117 aa10.12□□□□□ -0.79
AP003555.1-202ENST00000511013 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
AP003555.1-202ENST00000511013 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
AP003555.1-202ENST00000511013 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
AP003555.1-202ENST00000511013 RPL13AP40429 203 aaKnown RBP10.12□□□□□ -0.79
AP003555.1-202ENST00000511013 LINC00308Q8TCZ7 52 aa10.12□□□□□ -0.79
AP003555.1-202ENST00000511013 NDUFA7O95182 113 aa10.11□□□□□ -0.79
AP003555.1-202ENST00000511013 NF1P21359 2839 aa10.11□□□□□ -0.79
AP003555.1-202ENST00000511013 NOTCH3Q9UM47 2321 aa10.11□□□□□ -0.79
AP003555.1-202ENST00000511013 TRGV4A0A0C4DH28 118 aa10.11□□□□□ -0.79
AP003555.1-202ENST00000511013 CSNK1G2-AS1Q8NCQ2 148 aa10.11□□□□□ -0.79
AP003555.1-202ENST00000511013 PPDPFQ9H3Y8 114 aa10.11□□□□□ -0.79
AP003555.1-202ENST00000511013 F5H768 121 aa10.1□□□□□ -0.79
AP003555.1-202ENST00000511013 H3BT86 120 aa10.1□□□□□ -0.79
AP003555.1-202ENST00000511013 PRIMA1Q86XR5 153 aa10.1□□□□□ -0.79
AP003555.1-202ENST00000511013 NTN5Q8WTR8 489 aaPredicted RBP10.1□□□□□ -0.79
AP003555.1-202ENST00000511013 AKAP9Q99996 3911 aa10.09□□□□□ -0.79
AP003555.1-202ENST00000511013 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
AP003555.1-202ENST00000511013 DAND5Q8N907 189 aa10.09□□□□□ -0.79
AP003555.1-202ENST00000511013 ZNF625Q96I27 306 aaPredicted RBP10.09□□□□□ -0.79
AP003555.1-202ENST00000511013 SETD2Q9BYW2 2564 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms