RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 PDZD11Q5EBL8 140 aa7.86□□□□□ -1.15
CHFR-208ENST00000511001 GTSF1Q8WW33 167 aa7.86□□□□□ -1.15
CHFR-208ENST00000511001 SRRM2Q9UQ35 2752 aaKnown RBP7.85□□□□□ -1.15
CHFR-208ENST00000511001 MIAQ16674 131 aa7.85□□□□□ -1.15
CHFR-208ENST00000511001 CT83Q5H943 113 aa7.85□□□□□ -1.15
CHFR-208ENST00000511001 CLPSL2Q6UWE3 100 aa7.85□□□□□ -1.15
CHFR-208ENST00000511001 C20orf203Q8NBC4 194 aa7.85□□□□□ -1.15
CHFR-208ENST00000511001 FAM229AH3BQW9 127 aa7.84□□□□□ -1.15
CHFR-208ENST00000511001 ATP5L2Q7Z4Y8 100 aa7.84□□□□□ -1.15
CHFR-208ENST00000511001 LINC00269Q8N2A0 174 aa7.84□□□□□ -1.15
CHFR-208ENST00000511001 GATD1Q8NB37 220 aa7.84□□□□□ -1.15
CHFR-208ENST00000511001 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
CHFR-208ENST00000511001 PGLYRP4Q96LB8 373 aa7.84□□□□□ -1.15
CHFR-208ENST00000511001 MRPL18Q9H0U6 180 aaKnown RBP7.84□□□□□ -1.15
CHFR-208ENST00000511001 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 FAM231BA6NCW3 169 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 USP17L23D6RBM5 183 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 FOXA3P55318 350 aaPredicted RBP7.83□□□□□ -1.16
CHFR-208ENST00000511001 TWIST1Q15672 202 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 C14orf177Q52M58 125 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 C14orf144Q96I85 54 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 TMEM243Q9BU79 118 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 GFRA4Q9GZZ7 299 aa7.83□□□□□ -1.16
CHFR-208ENST00000511001 TRAV26-2A0A0B4J265 109 aa7.82□□□□□ -1.16
CHFR-208ENST00000511001 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
CHFR-208ENST00000511001 TMEM136Q6ZRR5 245 aa7.82□□□□□ -1.16
CHFR-208ENST00000511001 PRSS1P07477 247 aa7.81□□□□□ -1.16
CHFR-208ENST00000511001 REG3AQ06141 175 aa7.81□□□□□ -1.16
CHFR-208ENST00000511001 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
CHFR-208ENST00000511001 RPL39LQ96EH5 51 aaKnown RBP7.81□□□□□ -1.16
CHFR-208ENST00000511001 C2orf88Q9BSF0 95 aa7.81□□□□□ -1.16
CHFR-208ENST00000511001 A8MWL6 223 aa7.8□□□□□ -1.16
CHFR-208ENST00000511001 COTL1Q14019 142 aa7.8□□□□□ -1.16
CHFR-208ENST00000511001 TEX43Q6ZNM6 134 aa7.8□□□□□ -1.16
CHFR-208ENST00000511001 ZNF664Q8N3J9 261 aa7.8□□□□□ -1.16
CHFR-208ENST00000511001 TSKUQ8WUA8 353 aa7.8□□□□□ -1.16
CHFR-208ENST00000511001 CHAC1Q9BUX1 264 aa7.8□□□□□ -1.16
CHFR-208ENST00000511001 NAT8BQ9UHF3 227 aa7.8□□□□□ -1.16
CHFR-208ENST00000511001 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
CHFR-208ENST00000511001 RAB4AP20338 218 aa7.79□□□□□ -1.16
CHFR-208ENST00000511001 AMTP48728 403 aa7.79□□□□□ -1.16
CHFR-208ENST00000511001 LINC00310P59036 64 aa7.79□□□□□ -1.16
CHFR-208ENST00000511001 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
CHFR-208ENST00000511001 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
CHFR-208ENST00000511001 UBR4Q5T4S7 5183 aa7.78□□□□□ -1.16
CHFR-208ENST00000511001 TRAV8-4A0A0B4J246 113 aa7.78□□□□□ -1.16
CHFR-208ENST00000511001 SERF1AO75920 110 aa7.78□□□□□ -1.16
CHFR-208ENST00000511001 GAS8-AS1O95177 125 aa7.78□□□□□ -1.16
CHFR-208ENST00000511001 KRTAP10-4P60372 401 aaPredicted RBP7.78□□□□□ -1.16
CHFR-208ENST00000511001 LINC00469Q8N7U9 141 aa7.78□□□□□ -1.16
CHFR-208ENST00000511001 A0A1B0GXF2 115 aa7.77□□□□□ -1.17
CHFR-208ENST00000511001 APCSP02743 223 aa7.77□□□□□ -1.17
CHFR-208ENST00000511001 DGAT2L7PQ6IED9 249 aa7.77□□□□□ -1.17
CHFR-208ENST00000511001 SMIM15Q7Z3B0 74 aa7.77□□□□□ -1.17
CHFR-208ENST00000511001 C9orf163Q8N9P6 203 aa7.77□□□□□ -1.17
CHFR-208ENST00000511001 A0A1B0GW15 77 aa7.76□□□□□ -1.17
CHFR-208ENST00000511001 SDHAF1A6NFY7 115 aa7.76□□□□□ -1.17
CHFR-208ENST00000511001 HIGD1CA8MV81 97 aa7.76□□□□□ -1.17
CHFR-208ENST00000511001 UBE2L6O14933 153 aa7.76□□□□□ -1.17
CHFR-208ENST00000511001 NCR2O95944 276 aa7.76□□□□□ -1.17
CHFR-208ENST00000511001 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
CHFR-208ENST00000511001 PLA2G1BP04054 148 aaKnown RBP7.76□□□□□ -1.17
CHFR-208ENST00000511001 RNF185Q96GF1 192 aa7.76□□□□□ -1.17
CHFR-208ENST00000511001 PKHD1L1Q86WI1 4243 aa7.75□□□□□ -1.17
CHFR-208ENST00000511001 TRBV6-5A0A0K0K1A5 114 aa7.75□□□□□ -1.17
CHFR-208ENST00000511001 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
CHFR-208ENST00000511001 NUPR1O60356 82 aa7.75□□□□□ -1.17
CHFR-208ENST00000511001 SLPIP03973 132 aa7.75□□□□□ -1.17
CHFR-208ENST00000511001 NUP35Q8NFH5 326 aa7.75□□□□□ -1.17
CHFR-208ENST00000511001 TMEM191AQ9H0A3 160 aa7.75□□□□□ -1.17
CHFR-208ENST00000511001 PRO1933Q9H354 126 aa7.75□□□□□ -1.17
CHFR-208ENST00000511001 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
CHFR-208ENST00000511001 C20orf202A1L168 122 aa7.74□□□□□ -1.17
CHFR-208ENST00000511001 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
CHFR-208ENST00000511001 PANO1I0J062 215 aa7.74□□□□□ -1.17
CHFR-208ENST00000511001 HBBP68871 147 aa7.74□□□□□ -1.17
CHFR-208ENST00000511001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
CHFR-208ENST00000511001 HMCN2Q8NDA2 5059 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 I3L3M4 83 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 J3QL48 77 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 FGF6P10767 208 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 PMCHP20382 165 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
CHFR-208ENST00000511001 CNBPP62633 177 aaKnown RBP7.73□□□□□ -1.17
CHFR-208ENST00000511001 PMCHL1Q16048 86 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 SDIM1Q6ZPB5 146 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 AMN1Q8IY45 258 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 C18orf32Q8TCD1 76 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 BORCS7Q96B45 105 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 MIEN1Q9BRT3 115 aa7.73□□□□□ -1.17
CHFR-208ENST00000511001 IGKV3OR2-268A0A0C4DH90 116 aa7.72□□□□□ -1.17
CHFR-208ENST00000511001 hDV102S1A0JD36 115 aa7.72□□□□□ -1.17
CHFR-208ENST00000511001 GAGE12HA6NDE8 117 aa7.72□□□□□ -1.17
CHFR-208ENST00000511001 H7C423 109 aa7.72□□□□□ -1.17
CHFR-208ENST00000511001 M0R143 59 aa7.72□□□□□ -1.17
CHFR-208ENST00000511001 TSHBP01222 138 aa7.72□□□□□ -1.17
CHFR-208ENST00000511001 MRPL54Q6P161 138 aaKnown RBP7.72□□□□□ -1.17
CHFR-208ENST00000511001 RNASEKQ6P5S7 137 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms