RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 G3V4G9 280 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 RS1O15537 224 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 IGHV3-30P01768 117 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 IGHV3-30-5P0DP03 117 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
CAST-228ENST00000509903 LYRM7Q5U5X0 104 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 ARL17AQ8IVW1 177 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 TSSC4Q9Y5U2 329 aaPredicted RBP5.41□□□□□ -1.54
CAST-228ENST00000509903 NF1P21359 2839 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 TENM4Q6N022 2769 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 JMJD1CQ15652 2540 aa5.41□□□□□ -1.54
CAST-228ENST00000509903 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
CAST-228ENST00000509903 NBPF19A0A087WUL8 3843 aa5.4□□□□□ -1.54
CAST-228ENST00000509903 TRGV1A0A0A0MS02 117 aa5.4□□□□□ -1.54
CAST-228ENST00000509903 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
CAST-228ENST00000509903 TSPAN13O95857 204 aa5.4□□□□□ -1.54
CAST-228ENST00000509903 AZU1P20160 251 aa5.4□□□□□ -1.54
CAST-228ENST00000509903 MRPS36P82909 103 aaKnown RBP5.4□□□□□ -1.54
CAST-228ENST00000509903 NDUFA11Q86Y39 141 aa5.4□□□□□ -1.54
CAST-228ENST00000509903 CHCHD7Q9BUK0 85 aa5.4□□□□□ -1.54
CAST-228ENST00000509903 TEX48A0A1B0GUV7 120 aa5.4□□□□□ -1.55
CAST-228ENST00000509903 TMEM238C9JI98 176 aa5.4□□□□□ -1.55
CAST-228ENST00000509903 WFDC2Q14508 124 aa5.4□□□□□ -1.55
CAST-228ENST00000509903 SFTA2Q6UW10 78 aa5.4□□□□□ -1.55
CAST-228ENST00000509903 C1orf158Q8N1D5 194 aa5.4□□□□□ -1.55
CAST-228ENST00000509903 UBE2D4Q9Y2X8 147 aa5.4□□□□□ -1.55
CAST-228ENST00000509903 AKAP9Q99996 3911 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 IGHV3-30-3P0DP02 117 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 MTURNQ8N3F0 131 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 LINC01006Q8NI28 216 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 J3QR89 54 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 CFC1BP0CG36 223 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 CFC1P0CG37 223 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 ETDBQ3ZM63 59 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 Q6ZUT4 128 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 C10orf126Q8N4M7 172 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 FAM104AQ969W3 186 aa5.39□□□□□ -1.55
CAST-228ENST00000509903 GEMIN7Q9H840 131 aaKnown RBP5.39□□□□□ -1.55
CAST-228ENST00000509903 TRAV8-3A0A0A6YYJ7 113 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 PSMB2P49721 201 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 CMC4P56277 68 aaPredicted RBP5.38□□□□□ -1.55
CAST-228ENST00000509903 TMEM263Q8WUH6 116 aaKnown RBP5.38□□□□□ -1.55
CAST-228ENST00000509903 CITED1Q99966 193 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 PRO1854Q9UHT4 67 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 A0A0J9YXY3 114 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 UBE2D3P61077 147 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 UBE2D2P62837 147 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 RPL36AP83881 106 aaKnown RBP5.38□□□□□ -1.55
CAST-228ENST00000509903 KRTAP1-1Q07627 177 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 GAGE2BQ13066 116 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 GAGE2EQ4V326 116 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 Q6ZTI0 123 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 SH2D6Q7Z4S9 175 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 RPL36ALQ969Q0 106 aaKnown RBP5.38□□□□□ -1.55
CAST-228ENST00000509903 C16orf95Q9H693 158 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 GAGE2DQ9UEU5 116 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 NDUFA12Q9UI09 145 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 C2CD3Q4AC94 2353 aa5.38□□□□□ -1.55
CAST-228ENST00000509903 K7EQD1 137 aa5.37□□□□□ -1.55
CAST-228ENST00000509903 SPINK8P0C7L1 97 aa5.37□□□□□ -1.55
CAST-228ENST00000509903 SCGB1C2P0DMR2 95 aa5.37□□□□□ -1.55
CAST-228ENST00000509903 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
CAST-228ENST00000509903 ZNF418Q8TF45 676 aaPredicted RBP5.37□□□□□ -1.55
CAST-228ENST00000509903 VSIG2Q96IQ7 327 aa5.37□□□□□ -1.55
CAST-228ENST00000509903 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
CAST-228ENST00000509903 TRBV20-1A0A075B6N2 111 aa5.36□□□□□ -1.55
CAST-228ENST00000509903 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.36□□□□□ -1.55
CAST-228ENST00000509903 TRAV4A0A0B4J268 109 aa5.36□□□□□ -1.55
CAST-228ENST00000509903 TRBV10-1A0A0K0K1A3 114 aa5.36□□□□□ -1.55
CAST-228ENST00000509903 ITPR2Q14571 2701 aa5.36□□□□□ -1.55
CAST-228ENST00000509903 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
CAST-228ENST00000509903 PRSS2P07478 247 aa5.36□□□□□ -1.55
CAST-228ENST00000509903 RPL35AP18077 110 aaKnown RBP5.36□□□□□ -1.55
CAST-228ENST00000509903 Q1RN00 199 aa5.36□□□□□ -1.55
CAST-228ENST00000509903 NOP10Q9NPE3 64 aaKnown RBP5.36□□□□□ -1.55
CAST-228ENST00000509903 HIVEP2P31629 2446 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 H7C2G1 150 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 DAZ2Q13117 558 aaKnown RBP5.35□□□□□ -1.55
CAST-228ENST00000509903 DAZ4Q86SG3 579 aaKnown RBP5.35□□□□□ -1.55
CAST-228ENST00000509903 C16orf74Q96GX8 76 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 C1QTNF4Q9BXJ3 329 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 WFDC10AQ9H1F0 79 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 DAZ3Q9NR90 486 aaKnown RBP5.35□□□□□ -1.55
CAST-228ENST00000509903 ERG28Q9UKR5 140 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 TRGV2A0A075B6R0 118 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 GAGE12JA6NER3 117 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 TCL1BO95988 128 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 IGLV1-51P01701 117 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 HILS1P60008 231 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 SMAGPQ0VAQ4 97 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 GAGE4Q13068 117 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 GAGE5Q13069 117 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 CDKN2A-AS1Q9UH64 79 aa5.35□□□□□ -1.55
CAST-228ENST00000509903 IGHV3-33P01772 117 aa5.34□□□□□ -1.55
CAST-228ENST00000509903 HERVK_113P63121 156 aa5.34□□□□□ -1.55
CAST-228ENST00000509903 ZFAND6Q6FIF0 208 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms