RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 KPRPQ5T749 579 aaPredicted RBP1.33□□□□□ -2.2
PDE4D-218ENST00000509368 C5orf38Q86SI9 138 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 Q8N2B8 174 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 TRGV9Q99603 122 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 CHD3Q12873 2000 aaKnown RBP1.33□□□□□ -2.2
PDE4D-218ENST00000509368 EXPH5Q8NEV8 1989 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 IGKV2-28A0A075B6P5 120 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 IGKV1-9A0A0C4DH69 117 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 A0A1B0GVY2 172 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 BUB1B-PAK6H3BSN5 160 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 SDCBPO00560 298 aaPredicted RBP1.33□□□□□ -2.2
PDE4D-218ENST00000509368 IGKV2D-28P01615 120 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 IGHV1-69P01742 117 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 ACYP1P07311 99 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 MSMBP08118 114 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 DNAH10OSP0CZ25 163 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 PEBP1P30086 187 aaKnown RBP1.33□□□□□ -2.2
PDE4D-218ENST00000509368 ZNF117Q03924 483 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 MIR17HGQ75NE6 70 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 FAM216BQ8N7L0 139 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 Q8NAQ8 132 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 OR2T35Q8NGX2 323 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 SMCR5Q8TEV8 140 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 PPDPFLQ8WWR9 84 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 TSLPQ969D9 159 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 CRCT1Q9UGL9 99 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 RTTNQ86VV8 2226 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 SEC16AO15027 2179 aa1.33□□□□□ -2.2
PDE4D-218ENST00000509368 IBA57-AS1B1ANH7 110 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 NCBP2-AS2Q69YL0 99 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 ALKAL2Q6UX46 152 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 CNEP1R1Q8N9A8 125 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 S100A16Q96FQ6 103 aaKnown RBP1.32□□□□□ -2.2
PDE4D-218ENST00000509368 NDUFB11Q9NX14 153 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 ZANQ9Y493 2812 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 IGLV2-18A0A075B6J9 118 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 A0A096LNT2 108 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 IGKV3D-11A0A0A0MRZ8 115 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 IGHV3-15A0A0B4J1V0 119 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 IGHV3-73A0A0B4J1V6 119 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 DEFB108AA8MXU0 73 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 ZNF736B4DX44 427 aaPredicted RBP1.32□□□□□ -2.2
PDE4D-218ENST00000509368 C17orf112F2Z3M2 114 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 C3orf84H3BNL1 204 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 UBL3O95164 117 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 ZNF705BP0CI00 300 aaPredicted RBP1.32□□□□□ -2.2
PDE4D-218ENST00000509368 SSR2P43308 183 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 KRTAP10-3P60369 221 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 CCL8P80075 99 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 FOXF1Q12946 379 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 ZNF345Q14585 488 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 MIAQ16674 131 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 NOXRED1Q6NXP6 359 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 STAG3L4Q8TBR4 150 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 SCGB3A1Q96QR1 104 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 CCL19Q99731 98 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 U3KQK5 164 aa1.32□□□□□ -2.2
PDE4D-218ENST00000509368 IGKV1D-43A0A0B4J1Z2 117 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 A0A1W2PPM0 123 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 A6NED7 52 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 H0YGG7 62 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 LY6HO94772 140 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 MT-ATP8P03928 68 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 CD3DP04234 171 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 PIPP12273 146 aaPredicted RBP1.31□□□□□ -2.2
PDE4D-218ENST00000509368 XCL1P47992 114 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 SNRPD3P62318 126 aaKnown RBP1.31□□□□□ -2.2
PDE4D-218ENST00000509368 RPL30P62888 115 aaKnown RBP1.31□□□□□ -2.2
PDE4D-218ENST00000509368 Q1T7F1 81 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 DEFB110Q30KQ9 67 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 UNQ5815/PRO19632Q6UWF5 114 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 PATE2Q6UY27 113 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 SH2D6Q7Z4S9 175 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 SIGLECL1Q8N7X8 197 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 PFN4Q8NHR9 129 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 C18orf32Q8TCD1 76 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 C10orf105Q8TEF2 133 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 NPCDR1Q9BY65 106 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 TTTY12Q9BZ98 90 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 DPH3P1Q9H4G8 78 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 OSTCQ9NRP0 149 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 TP73-AS1Q9UF72 201 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 DSCAMO60469 2012 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 PKD1L1Q8TDX9 2849 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 MDC1Q14676 2089 aaKnown RBP1.31□□□□□ -2.2
PDE4D-218ENST00000509368 A0A0B4J2C4 111 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 A0A0J9YW62 118 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 LRCOL1A6NCL2 159 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 H3BPC8 53 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 STATHP02808 62 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 SLC25A6P12236 298 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 CBLN1P23435 193 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 SMIM11AP58511 58 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 LGALSLQ3ZCW2 172 aaPredicted RBP1.31□□□□□ -2.2
PDE4D-218ENST00000509368 BVES-AS1Q5T3Y7 98 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 HMGN2P46Q86SG4 172 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 DAND5Q8N907 189 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 OR8B3Q8NGG8 313 aa1.31□□□□□ -2.2
PDE4D-218ENST00000509368 OR8B2Q96RD0 313 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms