RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 TRGV1A0A0A0MS02 117 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 A0A0G2JND7 137 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 TRBV30A0A0K0K1B3 111 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 H7BZZ5 65 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 NCR3O14931 201 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 GYPAP02724 150 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 PRB1P04280 392 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 CCL18P55774 89 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 PPP1R1CQ8WVI7 109 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 LCN9Q8WX39 176 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 TRGV9Q99603 122 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 TMEM14BQ9NUH8 114 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 CACFD1Q9UGQ2 172 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 ARHGAP35Q9NRY4 1499 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 ZDBF2Q9HCK1 2354 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 USP9XQ93008 2570 aaPredicted RBP0.73□□□□□ -2.29
XRCC4-204ENST00000509268 KDM5AP29375 1690 aaKnown RBP0.73□□□□□ -2.29
XRCC4-204ENST00000509268 TANC1Q9C0D5 1861 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 LRRC37A3O60309 1634 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 PRDM2Q13029 1718 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 TMEM14DPA8MWL7 114 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 SYS1-DBNDD2H3BUS1 97 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 NDUFC1O43677 76 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 C10orf99Q6UWK7 81 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 UQCR10Q9UDW1 63 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 CCDC18Q5T9S5 1454 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 MLH3Q9UHC1 1453 aa0.73□□□□□ -2.29
XRCC4-204ENST00000509268 ZMYM4Q5VZL5 1548 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 SBF2Q86WG5 1849 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 ARHGEF5Q12774 1597 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 IGLC7A0M8Q6 106 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 H3BQF6 201 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 M0R135 149 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 LY6G6CO95867 125 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 COX6CP09669 75 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 LYNX1P0DP58 116 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 LINC00575Q6W349 94 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 VMO1Q7Z5L0 202 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 FAM223AQ8IWN6 122 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 PLAC4Q8WY50 150 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 AMELXQ99217 191 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 NXT2Q9NPJ8 142 aaKnown RBP0.72□□□□□ -2.29
XRCC4-204ENST00000509268 HIGD1BQ9P298 99 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 R4GMQ9 66 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 V9GYH0 126 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 NCOR1O75376 2440 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 PEAK1Q9H792 1746 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 HMGXB3Q12766 1538 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 CDK13Q14004 1512 aaKnown RBP0.72□□□□□ -2.29
XRCC4-204ENST00000509268 COL6A5A8TX70 2615 aa0.72□□□□□ -2.29
XRCC4-204ENST00000509268 SETXQ7Z333 2677 aaKnown RBP0.71□□□□□ -2.3
XRCC4-204ENST00000509268 NRXN1Q9ULB1 1477 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 A0A096LNT2 108 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 LOC285095A0A1B0GVY8 99 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 F8VRH5 84 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 J3QKU1 62 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 CYB5AP00167 134 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 PEA15Q15121 130 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 TMEM170BQ5T4T1 132 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 DEFB119Q8N690 84 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 S100A16Q96FQ6 103 aaKnown RBP0.71□□□□□ -2.3
XRCC4-204ENST00000509268 LINC01558Q9Y6Z2 57 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 ARL2-SNX15V9GYD0 113 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 MON2Q7Z3U7 1717 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 ABCC3O15438 1527 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 F5P12259 2224 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 LOC285556D6RIA3 1793 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 SIPA1L3O60292 1781 aaPredicted RBP0.71□□□□□ -2.3
XRCC4-204ENST00000509268 MYOM1P52179 1685 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 STAB1Q9NY15 2570 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 KNTC1P50748 2209 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 TOP2BQ02880 1626 aa0.71□□□□□ -2.3
XRCC4-204ENST00000509268 TRBV25-1A0A075B6N4 114 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 UQCRHLA0A096LP55 91 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 TRAV1-2A0A0B4J238 106 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 ZNF137PP52743 207 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 C6orf52Q5T4I8 152 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 BAGE3Q86Y29 109 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 EHBP1L1Q8N3D4 1523 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 TCHHQ07283 1943 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 PLIN4Q96Q06 1357 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 ARHGEF12Q9NZN5 1544 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 CTXND1A0A1B0GTU2 59 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 FAM223BA6NKX1 122 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 M0R3E3 92 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 ACYP2P14621 99 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 BAGE2Q86Y30 109 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 LINC00472Q9H8W2 130 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 WNK3Q9BYP7 1800 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 ZNF236Q9UL36 1845 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 CEP162Q5TB80 1403 aa0.7□□□□□ -2.3
XRCC4-204ENST00000509268 JMJD1CQ15652 2540 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 MYO7AQ13402 2215 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 COL6A6A6NMZ7 2263 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 GVQW2A0A096LPI5 108 aaPredicted RBP0.69□□□□□ -2.3
XRCC4-204ENST00000509268 UQCR11O14957 56 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 UQCRHP07919 91 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 SAA2P0DJI9 122 aaPredicted RBP0.69□□□□□ -2.3
XRCC4-204ENST00000509268 RPL37P61927 97 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms