RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SMCR5Q8TEV8 140 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 LAMA3Q16787 3333 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 IGKV2D-26A0A0A0MRZ7 120 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 IFI27P40305 119 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-209ENST00000508871 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-209ENST00000508871 CCKP06307 115 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 LINC01006Q8NI28 216 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 FAM104AQ969W3 186 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 IFI27L1Q96BM0 104 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 TRBV6-8A0A0A6YYG3 113 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 WFDC2Q14508 124 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 NDUFA4L2Q9NRX3 87 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 PDE4DIPQ5VU43 2346 aa2.76□□□□□ -1.97
NEDD4-209ENST00000508871 C19orf71A6NCJ1 209 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 TREML4Q6UXN2 200 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 CYYR1Q96J86 154 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 DPH3P1Q9H4G8 78 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 ZGRF1Q86YA3 2104 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 A0A087WWC5 75 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 NDUFA3O95167 84 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 COL8A2P25067 703 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 RPL39P5Q59GN2 51 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 LYPD2Q6UXB3 125 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 V9GYV3 84 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 SDK1Q7Z5N4 2213 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 SZT2Q5T011 3432 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 BVES-AS1Q5T3Y7 98 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 Q6ZTC4 211 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 CCL19Q99731 98 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 LECT2O14960 151 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 IAPPP10997 89 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 Q8N6K4 173 aa2.75□□□□□ -1.97
NEDD4-209ENST00000508871 Q6ZQT0 140 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 CYP4F30PQ9H0H9 118 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 TEX49A0A1B0GTD5 131 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 LINC00483Q53H64 154 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 Q86TA4 180 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 MYMXA0A1B0GTQ4 84 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 LCE2BO14633 110 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 PRR14LQ5THK1 2151 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 YLPM1P49750 1951 aaKnown RBP2.74□□□□□ -1.97
NEDD4-209ENST00000508871 F2Z2F3 143 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 TLX1NBP0CAT3 122 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 EGFEM1PQ0D2K5 195 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 FAM229BQ4G0N7 80 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 CASC10Q5T4H9 136 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 IGFL4Q6B9Z1 124 aa2.74□□□□□ -1.97
NEDD4-209ENST00000508871 H3BUA1 57 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 VMO1Q7Z5L0 202 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 Q8N7P7 452 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 DKK2Q9UBU2 259 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 WDFY3Q8IZQ1 3526 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 SHANK1Q9Y566 2161 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 PCNX2A6NKB5 2137 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 TMEM167BQ9NRX6 74 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 INTS1Q8N201 2190 aaKnown RBP2.73□□□□□ -1.97
NEDD4-209ENST00000508871 IGLV4-60A0A075B6I1 120 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 IGKV2-28A0A075B6P5 120 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 IGKV2D-28P01615 120 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 COX6B1P14854 86 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 CD24P25063 80 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 GTF3C1Q12789 2109 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 HCP5Q6MZN7 132 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 SMIM29Q86T20 159 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 DEFB108BQ8NET1 73 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 USP34Q70CQ2 3546 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 TRBV6-1A0A0K0K1D8 114 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 CLPSL1A2RUU4 121 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 CCL3L1P16619 93 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 MRGPRG-AS1Q2M3A8 158 aa2.73□□□□□ -1.97
NEDD4-209ENST00000508871 IGLV6-57P01721 117 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 GCHFRP30047 84 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 UBL5Q9BZL1 73 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 BSNQ9UPA5 3926 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 TRBV10-1A0A0K0K1A3 114 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 LY6EQ16553 131 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 PHF5AQ7RTV0 110 aaKnown RBP2.72□□□□□ -1.97
NEDD4-209ENST00000508871 Q8N377 158 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 IGHV3-64DA0A0J9YX35 117 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 F8WEM9 126 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 RNASE4P34096 147 aaKnown RBP2.72□□□□□ -1.97
NEDD4-209ENST00000508871 RNASE3P12724 160 aaKnown RBP2.72□□□□□ -1.97
NEDD4-209ENST00000508871 LYPD5Q6UWN5 251 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 LITAFQ99732 161 aa2.72□□□□□ -1.97
NEDD4-209ENST00000508871 FAM223BA6NKX1 122 aa2.71□□□□□ -1.98
NEDD4-209ENST00000508871 GFI1BQ5VTD9 330 aa2.71□□□□□ -1.98
NEDD4-209ENST00000508871 FAM223AQ8IWN6 122 aa2.71□□□□□ -1.98
NEDD4-209ENST00000508871 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
NEDD4-209ENST00000508871 LINC00588Q9Y4M8 146 aa2.71□□□□□ -1.98
NEDD4-209ENST00000508871 PRUNE2Q8WUY3 3088 aa2.71□□□□□ -1.98
NEDD4-209ENST00000508871 C1orf64Q8NEQ6 169 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 I3L2K1 104 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 TDRG1Q3Y452 100 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 C10orf113Q5VZT2 155 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 Q5XG85 94 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 C18orf32Q8TCD1 76 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 DSCAMO60469 2012 aa2.7□□□□□ -1.98
NEDD4-209ENST00000508871 TRBV7-1A0A0A6YYK4 115 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms