RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 SMIM11BQ8TCY0 68 aa1.36□□□□□ -2.19
USO1-202ENST00000508454 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
USO1-202ENST00000508454 UQCR10Q9UDW1 63 aa1.36□□□□□ -2.19
USO1-202ENST00000508454 MYO7AQ13402 2215 aa1.36□□□□□ -2.19
USO1-202ENST00000508454 GAPVD1Q14C86 1478 aa1.36□□□□□ -2.19
USO1-202ENST00000508454 FYCO1Q9BQS8 1478 aa1.36□□□□□ -2.19
USO1-202ENST00000508454 LOC285095A0A1B0GVY8 99 aa1.35□□□□□ -2.19
USO1-202ENST00000508454 F2Z2F3 143 aa1.35□□□□□ -2.19
USO1-202ENST00000508454 G3V318 75 aa1.35□□□□□ -2.19
USO1-202ENST00000508454 SFT2D2O95562 160 aa1.35□□□□□ -2.19
USO1-202ENST00000508454 TMEM170BQ5T4T1 132 aa1.35□□□□□ -2.19
USO1-202ENST00000508454 NPVFQ9HCQ7 196 aa1.35□□□□□ -2.19
USO1-202ENST00000508454 KDM5AP29375 1690 aaKnown RBP1.35□□□□□ -2.19
USO1-202ENST00000508454 HMGXB3Q12766 1538 aa1.35□□□□□ -2.19
USO1-202ENST00000508454 APOC3P02656 99 aa1.34□□□□□ -2.19
USO1-202ENST00000508454 SPINK9Q5DT21 86 aa1.34□□□□□ -2.19
USO1-202ENST00000508454 C6orf52Q5T4I8 152 aa1.34□□□□□ -2.19
USO1-202ENST00000508454 CFAP126Q5VTH2 177 aa1.34□□□□□ -2.19
USO1-202ENST00000508454 BAGE2Q86Y30 109 aa1.34□□□□□ -2.19
USO1-202ENST00000508454 Q9H521 79 aa1.34□□□□□ -2.19
USO1-202ENST00000508454 LINC00472Q9H8W2 130 aa1.34□□□□□ -2.19
USO1-202ENST00000508454 MAGI1Q96QZ7 1491 aaPredicted RBP1.34□□□□□ -2.19
USO1-202ENST00000508454 MYOM1P52179 1685 aa1.34□□□□□ -2.19
USO1-202ENST00000508454 LAMC3Q9Y6N6 1575 aa1.34□□□□□ -2.2
USO1-202ENST00000508454 TENM1Q9UKZ4 2725 aa1.33□□□□□ -2.2
USO1-202ENST00000508454 A0A0D9SG42 100 aa1.33□□□□□ -2.2
USO1-202ENST00000508454 A0A0G2JND7 137 aa1.33□□□□□ -2.2
USO1-202ENST00000508454 C9orf62Q8N4C0 152 aa1.33□□□□□ -2.2
USO1-202ENST00000508454 ARL2-SNX15V9GYD0 113 aa1.33□□□□□ -2.2
USO1-202ENST00000508454 TROQ12816 1431 aaPredicted RBP1.32□□□□□ -2.2
USO1-202ENST00000508454 RAPGEF2Q9Y4G8 1499 aa1.32□□□□□ -2.2
USO1-202ENST00000508454 ATOX1O00244 68 aa1.32□□□□□ -2.2
USO1-202ENST00000508454 TRAPPC2P0DI81 140 aa1.32□□□□□ -2.2
USO1-202ENST00000508454 TRAPPC2BP0DI82 140 aa1.32□□□□□ -2.2
USO1-202ENST00000508454 FAUP35544 74 aaKnown RBP1.32□□□□□ -2.2
USO1-202ENST00000508454 NXT2Q9NPJ8 142 aaKnown RBP1.32□□□□□ -2.2
USO1-202ENST00000508454 FAIMQ9NVQ4 179 aa1.32□□□□□ -2.2
USO1-202ENST00000508454 V9GYS6 101 aa1.32□□□□□ -2.2
USO1-202ENST00000508454 CDK13Q14004 1512 aaKnown RBP1.31□□□□□ -2.2
USO1-202ENST00000508454 PVALEFA0A1B0GWK0 134 aa1.31□□□□□ -2.2
USO1-202ENST00000508454 H7BZZ5 65 aa1.31□□□□□ -2.2
USO1-202ENST00000508454 UQCR11O14957 56 aa1.31□□□□□ -2.2
USO1-202ENST00000508454 COX6CP09669 75 aa1.31□□□□□ -2.2
USO1-202ENST00000508454 FAM223AQ8IWN6 122 aa1.31□□□□□ -2.2
USO1-202ENST00000508454 SERP2Q8N6R1 65 aa1.31□□□□□ -2.2
USO1-202ENST00000508454 CACFD1Q9UGQ2 172 aa1.31□□□□□ -2.2
USO1-202ENST00000508454 NSD3Q9BZ95 1437 aa1.31□□□□□ -2.2
USO1-202ENST00000508454 TRBV7-7A0A0K0K1E9 115 aa1.3□□□□□ -2.2
USO1-202ENST00000508454 M0R3E3 92 aa1.3□□□□□ -2.2
USO1-202ENST00000508454 TRGV9Q99603 122 aa1.3□□□□□ -2.2
USO1-202ENST00000508454 PRO1933Q9H354 126 aa1.3□□□□□ -2.2
USO1-202ENST00000508454 PLEKHH2Q8IVE3 1493 aa1.3□□□□□ -2.2
USO1-202ENST00000508454 TOP2BQ02880 1626 aa1.29□□□□□ -2.2
USO1-202ENST00000508454 KIF21AQ7Z4S6 1674 aa1.29□□□□□ -2.2
USO1-202ENST00000508454 NDUFC1O43677 76 aa1.29□□□□□ -2.2
USO1-202ENST00000508454 GCHFRP30047 84 aa1.29□□□□□ -2.2
USO1-202ENST00000508454 C20orf78Q9BR46 151 aa1.29□□□□□ -2.2
USO1-202ENST00000508454 KIAA1551Q9HCM1 1747 aa1.29□□□□□ -2.2
USO1-202ENST00000508454 MYO7BQ6PIF6 2116 aa1.28□□□□□ -2.2
USO1-202ENST00000508454 FAM223BA6NKX1 122 aa1.28□□□□□ -2.2
USO1-202ENST00000508454 ASIPP42127 132 aa1.28□□□□□ -2.2
USO1-202ENST00000508454 FXYD6P3P58550 94 aa1.28□□□□□ -2.2
USO1-202ENST00000508454 C10orf95Q9H7T3 257 aa1.28□□□□□ -2.2
USO1-202ENST00000508454 MLH3Q9UHC1 1453 aa1.28□□□□□ -2.2
USO1-202ENST00000508454 EHBP1L1Q8N3D4 1523 aa1.28□□□□□ -2.2
USO1-202ENST00000508454 BTAF1O14981 1849 aa1.28□□□□□ -2.2
USO1-202ENST00000508454 CADP27708 2225 aa1.27□□□□□ -2.21
USO1-202ENST00000508454 MARF1Q9Y4F3 1742 aaKnown RBP1.27□□□□□ -2.21
USO1-202ENST00000508454 SMIM4Q8WVI0 70 aa1.27□□□□□ -2.21
USO1-202ENST00000508454 SPRR4Q96PI1 79 aa1.27□□□□□ -2.21
USO1-202ENST00000508454 PRR15LQ9BU68 103 aa1.27□□□□□ -2.21
USO1-202ENST00000508454 SYS1-DBNDD2H3BUS1 97 aa1.26□□□□□ -2.21
USO1-202ENST00000508454 KMT2BQ9UMN6 2715 aaPredicted RBP1.26□□□□□ -2.21
USO1-202ENST00000508454 SBF2Q86WG5 1849 aa1.26□□□□□ -2.21
USO1-202ENST00000508454 PROK2Q9HC23 129 aa1.25□□□□□ -2.21
USO1-202ENST00000508454 SCN7AQ01118 1682 aa1.25□□□□□ -2.21
USO1-202ENST00000508454 BAZ1AQ9NRL2 1556 aaPredicted RBP1.25□□□□□ -2.21
USO1-202ENST00000508454 DIP2CQ9Y2E4 1556 aa1.25□□□□□ -2.21
USO1-202ENST00000508454 TRBV25-1A0A075B6N4 114 aa1.24□□□□□ -2.21
USO1-202ENST00000508454 PYY3Q5JQD4 70 aa1.24□□□□□ -2.21
USO1-202ENST00000508454 FAM103A1Q9BTL3 118 aaKnown RBP1.24□□□□□ -2.21
USO1-202ENST00000508454 HIGD1BQ9P298 99 aa1.24□□□□□ -2.21
USO1-202ENST00000508454 NRXN1Q9ULB1 1477 aa1.24□□□□□ -2.21
USO1-202ENST00000508454 GYPAP02724 150 aa1.23□□□□□ -2.21
USO1-202ENST00000508454 NMBP08949 121 aa1.23□□□□□ -2.21
USO1-202ENST00000508454 SAA2P0DJI9 122 aaPredicted RBP1.23□□□□□ -2.21
USO1-202ENST00000508454 ASXL3Q9C0F0 2248 aa1.23□□□□□ -2.21
USO1-202ENST00000508454 PLXNB2O15031 1838 aa1.22□□□□□ -2.21
USO1-202ENST00000508454 ASH1LQ9NR48 2969 aaKnown RBP1.22□□□□□ -2.21
USO1-202ENST00000508454 COX17Q14061 63 aa1.22□□□□□ -2.21
USO1-202ENST00000508454 MON2Q7Z3U7 1717 aa1.22□□□□□ -2.21
USO1-202ENST00000508454 JMJD1CQ15652 2540 aa1.21□□□□□ -2.22
USO1-202ENST00000508454 PDCD11Q14690 1871 aaKnown RBP1.21□□□□□ -2.22
USO1-202ENST00000508454 MGPP08493 103 aa1.21□□□□□ -2.22
USO1-202ENST00000508454 PMCHL1Q16048 86 aa1.21□□□□□ -2.22
USO1-202ENST00000508454 ZNF462Q96JM2 2506 aa1.21□□□□□ -2.22
USO1-202ENST00000508454 RB1CC1Q8TDY2 1594 aa1.21□□□□□ -2.22
USO1-202ENST00000508454 A0A1B0GWA3 101 aa1.2□□□□□ -2.22
USO1-202ENST00000508454 C7orf77A4D0Y5 90 aa1.2□□□□□ -2.22
USO1-202ENST00000508454 K7EP34 96 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms