RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 Q6ZTI0 123 aa7.85□□□□□ -1.15
LIN54-207ENST00000508171 CLUHP3Q96NS8 147 aa7.85□□□□□ -1.15
LIN54-207ENST00000508171 CDKN2A-AS1Q9UH64 79 aa7.85□□□□□ -1.15
LIN54-207ENST00000508171 NDUFA12Q9UI09 145 aa7.85□□□□□ -1.15
LIN54-207ENST00000508171 TRAV25A0A0B4J276 109 aa7.84□□□□□ -1.15
LIN54-207ENST00000508171 NPC2P61916 151 aa7.84□□□□□ -1.15
LIN54-207ENST00000508171 FOXI1Q12951 378 aa7.84□□□□□ -1.15
LIN54-207ENST00000508171 LINC00694P0DN24 101 aa7.84□□□□□ -1.16
LIN54-207ENST00000508171 COX6A2Q02221 97 aa7.84□□□□□ -1.16
LIN54-207ENST00000508171 C1QTNF4Q9BXJ3 329 aa7.84□□□□□ -1.16
LIN54-207ENST00000508171 WFDC10AQ9H1F0 79 aa7.84□□□□□ -1.16
LIN54-207ENST00000508171 GEMIN7Q9H840 131 aaKnown RBP7.84□□□□□ -1.16
LIN54-207ENST00000508171 ERG28Q9UKR5 140 aa7.84□□□□□ -1.16
LIN54-207ENST00000508171 NDUFA7O95182 113 aa7.83□□□□□ -1.16
LIN54-207ENST00000508171 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
LIN54-207ENST00000508171 DGAT2L7PQ6IED9 249 aa7.83□□□□□ -1.16
LIN54-207ENST00000508171 IL17DQ8TAD2 202 aa7.83□□□□□ -1.16
LIN54-207ENST00000508171 TRBV20-1A0A075B6N2 111 aa7.83□□□□□ -1.16
LIN54-207ENST00000508171 LINC01006Q8NI28 216 aa7.83□□□□□ -1.16
LIN54-207ENST00000508171 SIGMAR1Q99720 223 aa7.83□□□□□ -1.16
LIN54-207ENST00000508171 A0A0B4J2C4 111 aa7.82□□□□□ -1.16
LIN54-207ENST00000508171 SMAGPQ0VAQ4 97 aa7.82□□□□□ -1.16
LIN54-207ENST00000508171 GIG44P09565 113 aaPredicted RBP7.82□□□□□ -1.16
LIN54-207ENST00000508171 NTM-AS1Q6ZSK4 140 aa7.82□□□□□ -1.16
LIN54-207ENST00000508171 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
LIN54-207ENST00000508171 SPATA25Q9BR10 227 aa7.82□□□□□ -1.16
LIN54-207ENST00000508171 NOP10Q9NPE3 64 aaKnown RBP7.82□□□□□ -1.16
LIN54-207ENST00000508171 PLA2G2AP14555 144 aa7.81□□□□□ -1.16
LIN54-207ENST00000508171 KRTAP1-1Q07627 177 aa7.81□□□□□ -1.16
LIN54-207ENST00000508171 DAND5Q8N907 189 aa7.81□□□□□ -1.16
LIN54-207ENST00000508171 TMEM101Q96IK0 257 aa7.81□□□□□ -1.16
LIN54-207ENST00000508171 Q1RN00 199 aa7.81□□□□□ -1.16
LIN54-207ENST00000508171 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.8□□□□□ -1.16
LIN54-207ENST00000508171 YAE1D1Q9NRH1 226 aa7.8□□□□□ -1.16
LIN54-207ENST00000508171 GAGE12JA6NER3 117 aa7.8□□□□□ -1.16
LIN54-207ENST00000508171 RPL35AP18077 110 aaKnown RBP7.8□□□□□ -1.16
LIN54-207ENST00000508171 GAGE4Q13068 117 aa7.8□□□□□ -1.16
LIN54-207ENST00000508171 GAGE5Q13069 117 aa7.8□□□□□ -1.16
LIN54-207ENST00000508171 LINC00242Q5T6M2 205 aa7.8□□□□□ -1.16
LIN54-207ENST00000508171 ZFAND6Q6FIF0 208 aa7.8□□□□□ -1.16
LIN54-207ENST00000508171 SBSPONQ8IVN8 264 aa7.8□□□□□ -1.16
LIN54-207ENST00000508171 ATP6V0E2Q8NHE4 81 aa7.8□□□□□ -1.16
LIN54-207ENST00000508171 HELZ2Q9BYK8 2649 aaKnown RBP7.79□□□□□ -1.16
LIN54-207ENST00000508171 C9JAW5 83 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 K7EQD1 137 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 RPL36AP83881 106 aaKnown RBP7.79□□□□□ -1.16
LIN54-207ENST00000508171 TEN1Q86WV5 123 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 RPL36ALQ969Q0 106 aaKnown RBP7.79□□□□□ -1.16
LIN54-207ENST00000508171 ANK3Q12955 4377 aaKnown RBP7.79□□□□□ -1.16
LIN54-207ENST00000508171 TRAV13-1A0A0B4J241 112 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 TIRAPP58753 221 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 MIAQ16674 131 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 TEX29Q8N6K0 151 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 SPANXCQ9NY87 97 aa7.79□□□□□ -1.16
LIN54-207ENST00000508171 IGLV5-45A0A087WSX0 123 aa7.78□□□□□ -1.16
LIN54-207ENST00000508171 ANKRD29Q8N6D5 301 aa7.78□□□□□ -1.16
LIN54-207ENST00000508171 ZNF625Q96I27 306 aaPredicted RBP7.78□□□□□ -1.16
LIN54-207ENST00000508171 TRAV4A0A0B4J268 109 aa7.78□□□□□ -1.16
LIN54-207ENST00000508171 LOC100131303A0A0U1RQF7 123 aa7.78□□□□□ -1.16
LIN54-207ENST00000508171 PLAC8L1A1L4L8 177 aa7.78□□□□□ -1.16
LIN54-207ENST00000508171 TRIAP1O43715 76 aa7.78□□□□□ -1.16
LIN54-207ENST00000508171 SLC25A20O43772 301 aa7.78□□□□□ -1.16
LIN54-207ENST00000508171 NBEAL2Q6ZNJ1 2754 aa7.78□□□□□ -1.16
LIN54-207ENST00000508171 A0A0U1RRA0 63 aa7.77□□□□□ -1.16
LIN54-207ENST00000508171 GAGE7O76087 117 aa7.77□□□□□ -1.16
LIN54-207ENST00000508171 GAGE12FP0CL80 117 aa7.77□□□□□ -1.16
LIN54-207ENST00000508171 GAGE12GP0CL81 117 aa7.77□□□□□ -1.16
LIN54-207ENST00000508171 GAGE12IP0CL82 117 aa7.77□□□□□ -1.16
LIN54-207ENST00000508171 CDIP1Q9H305 208 aa7.77□□□□□ -1.16
LIN54-207ENST00000508171 FN1P02751 2386 aaKnown RBP7.77□□□□□ -1.17
LIN54-207ENST00000508171 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
LIN54-207ENST00000508171 PPDPFLQ8WWR9 84 aa7.77□□□□□ -1.17
LIN54-207ENST00000508171 C19orf73Q9NVV2 129 aa7.77□□□□□ -1.17
LIN54-207ENST00000508171 IGLV1-51P01701 117 aa7.76□□□□□ -1.17
LIN54-207ENST00000508171 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
LIN54-207ENST00000508171 DAZ2Q13117 558 aaKnown RBP7.76□□□□□ -1.17
LIN54-207ENST00000508171 DAZ4Q86SG3 579 aaKnown RBP7.76□□□□□ -1.17
LIN54-207ENST00000508171 DAZ3Q9NR90 486 aaKnown RBP7.76□□□□□ -1.17
LIN54-207ENST00000508171 TRGV2A0A075B6R0 118 aa7.76□□□□□ -1.17
LIN54-207ENST00000508171 TRBV30A0A0K0K1B3 111 aa7.76□□□□□ -1.17
LIN54-207ENST00000508171 NDUFA1O15239 70 aa7.76□□□□□ -1.17
LIN54-207ENST00000508171 HERVK_113P63121 156 aa7.76□□□□□ -1.17
LIN54-207ENST00000508171 C16orf95Q9H693 158 aa7.76□□□□□ -1.17
LIN54-207ENST00000508171 Q9H8V8 135 aa7.76□□□□□ -1.17
LIN54-207ENST00000508171 VWFP04275 2813 aa7.76□□□□□ -1.17
LIN54-207ENST00000508171 GCN1Q92616 2671 aaKnown RBP7.76□□□□□ -1.17
LIN54-207ENST00000508171 CDC42SE2Q9NRR3 84 aa7.75□□□□□ -1.17
LIN54-207ENST00000508171 UNC79Q9P2D8 2635 aa7.75□□□□□ -1.17
LIN54-207ENST00000508171 IGLV5-39A0A0G2JS06 123 aa7.75□□□□□ -1.17
LIN54-207ENST00000508171 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
LIN54-207ENST00000508171 CSNK1G2-AS1Q8NCQ2 148 aa7.75□□□□□ -1.17
LIN54-207ENST00000508171 CSDC2Q9Y534 153 aaKnown RBP7.75□□□□□ -1.17
LIN54-207ENST00000508171 ICOSQ9Y6W8 199 aa7.75□□□□□ -1.17
LIN54-207ENST00000508171 ATXN8Q156A1 80 aa7.74□□□□□ -1.17
LIN54-207ENST00000508171 LINC01620Q4KN68 170 aa7.74□□□□□ -1.17
LIN54-207ENST00000508171 FASNP49327 2511 aaKnown RBP7.74□□□□□ -1.17
LIN54-207ENST00000508171 TIMM17BO60830 172 aa7.74□□□□□ -1.17
LIN54-207ENST00000508171 C16orf74Q96GX8 76 aa7.74□□□□□ -1.17
LIN54-207ENST00000508171 SMR3AQ99954 134 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms