RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 TRAV8-3A0A0A6YYJ7 113 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 A0A1B0GX51 115 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 K7EQD1 137 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 SPRY2O43597 315 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 GNLYP22749 145 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 DEFB1P60022 68 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 LRRC75A-AS1Q8N1F1 130 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 LINC01561Q8N1V8 128 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 MUC7Q8TAX7 377 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 C16orf74Q96GX8 76 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 PCNX1Q96RV3 2341 aa4.23□□□□□ -1.73
CLDND1-213ENST00000506927 TRBV6-4A0A1B0GX49 114 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 IBA57-AS1B1ANH7 110 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 ATOX1O00244 68 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 UQCRQO14949 82 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 BAALC-AS2P0C853 105 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 RPL28P46779 137 aaKnown RBP4.22□□□□□ -1.73
CLDND1-213ENST00000506927 DEFB114Q30KQ6 69 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 TMEM95Q3KNT9 176 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 ADAMTSL4-AS1Q5T5F5 129 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 MAP6D1Q9H9H5 199 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 ACACAQ13085 2346 aa4.22□□□□□ -1.73
CLDND1-213ENST00000506927 WNK2Q9Y3S1 2297 aa4.21□□□□□ -1.73
CLDND1-213ENST00000506927 APC2O95996 2303 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 CACNA1BQ00975 2339 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.21□□□□□ -1.74
CLDND1-213ENST00000506927 IGHV3-73A0A0B4J1V6 119 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 IGKV2-29A2NJV5 120 aaPredicted RBP4.21□□□□□ -1.74
CLDND1-213ENST00000506927 KNCNA6PVL3 124 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 JMJD7-PLA2G4BH0Y9G9 81 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 C11orf72Q8NBR9 251 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 ZNF702PQ9H963 129 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 CACNA1HO95180 2353 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 TPRP12270 2363 aaKnown RBP4.21□□□□□ -1.74
CLDND1-213ENST00000506927 CELSR3Q9NYQ7 3312 aa4.21□□□□□ -1.74
CLDND1-213ENST00000506927 PRRC2CQ9Y520 2896 aaKnown RBP4.2□□□□□ -1.74
CLDND1-213ENST00000506927 TRGV1A0A0A0MS02 117 aa4.2□□□□□ -1.74
CLDND1-213ENST00000506927 SMIM1B2RUZ4 78 aa4.2□□□□□ -1.74
CLDND1-213ENST00000506927 C19orf84I3L1E1 186 aa4.2□□□□□ -1.74
CLDND1-213ENST00000506927 NHLRC4P0CG21 123 aaPredicted RBP4.2□□□□□ -1.74
CLDND1-213ENST00000506927 FHL3Q13643 280 aa4.2□□□□□ -1.74
CLDND1-213ENST00000506927 ATP5EP2Q5VTU8 51 aa4.2□□□□□ -1.74
CLDND1-213ENST00000506927 COX7B2Q8TF08 81 aa4.2□□□□□ -1.74
CLDND1-213ENST00000506927 ZNF625Q96I27 306 aaPredicted RBP4.2□□□□□ -1.74
CLDND1-213ENST00000506927 DSPP15924 2871 aaKnown RBP4.2□□□□□ -1.74
CLDND1-213ENST00000506927 COL6A3P12111 3177 aa4.2□□□□□ -1.74
CLDND1-213ENST00000506927 CNOT1A5YKK6 2376 aaKnown RBP4.19□□□□□ -1.74
CLDND1-213ENST00000506927 ABCA4P78363 2273 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 ZZEF1O43149 2961 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 PRRC2AP48634 2157 aaKnown RBP4.19□□□□□ -1.74
CLDND1-213ENST00000506927 PIEZO2Q9H5I5 2752 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 IGHV3OR16-12A0A075B7B8 117 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 COX17Q14061 63 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 CLEC2BQ92478 149 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 CITED2Q99967 270 aaPredicted RBP4.19□□□□□ -1.74
CLDND1-213ENST00000506927 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 SND1-IT1Q9HBX3 110 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 NBEAQ8NFP9 2946 aa4.19□□□□□ -1.74
CLDND1-213ENST00000506927 BDP1A6H8Y1 2624 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 TRAV13-1A0A0B4J241 112 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 TRGV4A0A0C4DH28 118 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 LINC00158P58513 81 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 KRTAP1-1Q07627 177 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 SS18Q15532 418 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 C9orf153Q5TBE3 101 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 CEMP1Q6PRD7 247 aaPredicted RBP4.18□□□□□ -1.74
CLDND1-213ENST00000506927 SDIM1Q6ZPB5 146 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 FAM104AQ969W3 186 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 LINC00526Q96FQ7 95 aa4.18□□□□□ -1.74
CLDND1-213ENST00000506927 EP300Q09472 2414 aaPredicted RBP4.18□□□□□ -1.74
CLDND1-213ENST00000506927 CEP250Q9BV73 2442 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 IGHV3-38A0A0C4DH36 116 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 SMIM9A6NGZ8 99 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 BCE1O60756 84 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 CRLF1O75462 422 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 PDE6GP18545 87 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 NPC2P61916 151 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
CLDND1-213ENST00000506927 RBMY1FQ15415 496 aaKnown RBP4.17□□□□□ -1.74
CLDND1-213ENST00000506927 C5orf38Q86SI9 138 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 DEFB104AQ8WTQ1 72 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 ORMDL1Q9P0S3 153 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 XCL2Q9UBD3 114 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 SS18L2Q9UHA2 77 aa4.17□□□□□ -1.74
CLDND1-213ENST00000506927 MAP1BP46821 2468 aaKnown RBP4.16□□□□□ -1.74
CLDND1-213ENST00000506927 A0A087WZ39 114 aa4.16□□□□□ -1.74
CLDND1-213ENST00000506927 FAM236AA0A1B0GUQ0 79 aa4.16□□□□□ -1.74
CLDND1-213ENST00000506927 FAM236BA0A1B0GV22 79 aa4.16□□□□□ -1.74
CLDND1-213ENST00000506927 DNAJC9-AS1A6NH13 148 aa4.16□□□□□ -1.74
CLDND1-213ENST00000506927 F5H768 121 aa4.16□□□□□ -1.74
CLDND1-213ENST00000506927 CCL24O00175 119 aa4.16□□□□□ -1.74
CLDND1-213ENST00000506927 NDUFC2O95298 119 aa4.16□□□□□ -1.74
CLDND1-213ENST00000506927 IGHV4-31P0DP07 118 aa4.16□□□□□ -1.74
CLDND1-213ENST00000506927 COX7CP15954 63 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms