RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 SPANXN1Q5VSR9 72 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 ADM2Q7Z4H4 148 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 SMIM20Q8N5G0 67 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 C3orf22Q8N5N4 141 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 PTH2Q96A98 100 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 UBE2WQ96B02 151 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 SLC50A1Q9BRV3 221 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 CNFNQ9BYD5 112 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 R4GN34 69 aa3.16□□□□□ -1.9
CHD1-204ENST00000505982 TRAV26-2A0A0B4J265 109 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 RBAKDNA6NC62 111 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 K7EIM0 57 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 SLC25A20O43772 301 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 TCL1BO95988 128 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 MGPP08493 103 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 LGALS3P17931 250 aaKnown RBP3.15□□□□□ -1.91
CHD1-204ENST00000505982 HLA-DMBP28068 263 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 ZNF80P51504 273 aaPredicted RBP3.15□□□□□ -1.91
CHD1-204ENST00000505982 CCL8P80075 99 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 ATXN8Q156A1 80 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 TMEM155Q4W5P6 130 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 Q6Q795 121 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 NDUFA11Q86Y39 141 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 LINC00304Q8N9R0 145 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 TOMM6Q96B49 74 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 CARD19Q96LW7 228 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 DYNLRB1Q9NP97 96 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 PRO1854Q9UHT4 67 aa3.15□□□□□ -1.91
CHD1-204ENST00000505982 TRAV2A0A0B4J234 112 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 TRAV17A0A0B4J275 112 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 PPP1R17O96001 155 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 SBSPONQ8IVN8 264 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 DYNAPQ8N1N2 210 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 C10orf126Q8N4M7 172 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 ZNRF2Q8NHG8 242 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 PLEKHB2Q96CS7 222 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 A0A0C4DFX4 3053 aa3.14□□□□□ -1.91
CHD1-204ENST00000505982 INTS1Q8N201 2190 aaKnown RBP3.14□□□□□ -1.91
CHD1-204ENST00000505982 MED13Q9UHV7 2174 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.13□□□□□ -1.91
CHD1-204ENST00000505982 BUB1B-PAK6H3BSN5 160 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 CCDC179H3BU77 68 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 H7C2G1 150 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 M0R381 172 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 CD7P09564 240 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 P0DMU3 169 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 FAM231AP0DMU4 169 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 FAM231CP0DMU5 169 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 HRES1P13985 223 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 S100A4P26447 101 aaKnown RBP3.13□□□□□ -1.91
CHD1-204ENST00000505982 HES1Q14469 280 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 TMEM170BQ5T4T1 132 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 C15orf53Q8NAA6 179 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 TMEM126AQ9H061 195 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 DPH3P1Q9H4G8 78 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 SDK1Q7Z5N4 2213 aa3.13□□□□□ -1.91
CHD1-204ENST00000505982 MALRD1Q5VYJ5 2156 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 CACNA1GO43497 2377 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 TRAV4A0A0B4J268 109 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 A0A0J9YY99 117 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 C11orf86A6NJI1 115 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 PLXNB1O43157 2135 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 IGLV6-57P01721 117 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 COX6CP09669 75 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 COX6B1P14854 86 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 EMP1P54849 157 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 MEIG1Q5JSS6 88 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 C2orf82Q6UX34 121 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 TMEM141Q96I45 108 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 PHLDA3Q9Y5J5 127 aa3.12□□□□□ -1.91
CHD1-204ENST00000505982 ARFGEF3Q5TH69 2177 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 TRBV10-2A0A0K0K1G8 114 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 H3BT86 120 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 J3QQQ9 107 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 M0R2P5 195 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 IGHV3-30P01768 117 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 IGHV3-30-5P0DP03 117 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 C9orf153Q5TBE3 101 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 RPL39LQ96EH5 51 aaKnown RBP3.11□□□□□ -1.91
CHD1-204ENST00000505982 B9D2Q9BPU9 175 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 SPANXDQ9BXN6 97 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 KAAG1Q9UBP8 84 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 VPREB3Q9UKI3 123 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 TP53TG1Q9Y2A0 90 aa3.11□□□□□ -1.91
CHD1-204ENST00000505982 ZGRF1Q86YA3 2104 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 TRAV21A0A0B4J279 112 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 LEPROTO15243 131 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 IGHV3-33P01772 117 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 PRB3Q04118 309 aaPredicted RBP3.1□□□□□ -1.91
CHD1-204ENST00000505982 BSPH1Q075Z2 132 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 ZNF56Q15929 161 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 C4orf26Q17RF5 130 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 FDCSPQ8NFU4 85 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 TMEM263Q8WUH6 116 aaKnown RBP3.1□□□□□ -1.91
CHD1-204ENST00000505982 ODF3Q96PU9 254 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 TM2D3Q9BRN9 247 aa3.1□□□□□ -1.91
CHD1-204ENST00000505982 AGPAT4-IT1Q9H0P7 198 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms