RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 LELP1Q5T871 98 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 RTL8CO15255 209 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 PPDPFLQ8WWR9 84 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 Q9UF83 564 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 C19orf71A6NCJ1 209 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 F8VRH5 84 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 FHL3Q13643 280 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 Q8N9L7 120 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 A0A0J9YX75 114 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 C20orf173Q96LM9 149 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 PTPRBP23467 1997 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 SORL1Q92673 2214 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 LGALS9BQ3B8N2 356 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 NOTCH3Q9UM47 2321 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 ODF3BA8MYP8 253 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 PCOTHQ58A44 107 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 IGFL2Q6UWQ7 119 aa3.83□□□□□ -1.8
MATR3-211ENST00000505625 TMEM223A0PJW6 202 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 LMO4P61968 165 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 LINC01554Q52M75 96 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 I3L2K1 104 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 CXCL1P09341 107 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 A4D1N5 150 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 Q96NJ1 140 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 V9GYV3 84 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 CCKP06307 115 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 MOBPQ13875 183 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 Q9BRP9 147 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 A0A0J9YXY3 114 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 K7EIM0 57 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 CDSNQ15517 529 aa3.82□□□□□ -1.8
MATR3-211ENST00000505625 BRCA2P51587 3418 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 TMEM14EPQ6UXP3 125 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 C9orf116Q5BN46 136 aaPredicted RBP3.81□□□□□ -1.8
MATR3-211ENST00000505625 CFAP126Q5VTH2 177 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 NEXN-AS1Q8NBZ9 246 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 A0A0B4J2C4 111 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 FNDC10F2Z333 226 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 IGLV8-61A0A075B6I0 122 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 A6NED7 52 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 H0YGX0 51 aa3.81□□□□□ -1.8
MATR3-211ENST00000505625 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 NDUFS6O75380 124 aaKnown RBP3.8□□□□□ -1.8
MATR3-211ENST00000505625 DHRS4-AS1Q9P1J3 65 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 EPM2AB3EWF7 344 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 CRIP2P52943 208 aaPredicted RBP3.8□□□□□ -1.8
MATR3-211ENST00000505625 KRTAP24-1Q3LI83 254 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 NMBP08949 121 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 CFC1P0CG37 223 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 PATE2Q6UY27 113 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 CCDC140Q96MF4 163 aa3.8□□□□□ -1.8
MATR3-211ENST00000505625 hDV103S1A0JD37 113 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 M0R378 163 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 MAPKAPK5-AS1Q8N8E1 139 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 HIVEP2P31629 2446 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 ENHOQ6UWT2 76 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 C11orf53Q8IXP5 236 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 PSMG3-AS1Q96PY0 264 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 DNAH12Q6ZR08 3092 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 NDUFC2O95298 119 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 PCP4P48539 62 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 MRGPRG-AS1Q2M3A8 158 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 Q5VSD8 79 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 NDUFA7O95182 113 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 IGLC2P0DOY2 106 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 IGLC3P0DOY3 106 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
MATR3-211ENST00000505625 EGFEM1PQ0D2K5 195 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 SNURFQ9Y675 71 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 PTPRQQ9UMZ3 2332 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 A0A0U1RQV1 116 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 E7EUB6 86 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 COL27A1Q8IZC6 1860 aaPredicted RBP3.78□□□□□ -1.8
MATR3-211ENST00000505625 PCSK5Q92824 1860 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 LINC00242Q5T6M2 205 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 SDIM1Q6ZPB5 146 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 MRPL55Q7Z7F7 128 aaKnown RBP3.78□□□□□ -1.8
MATR3-211ENST00000505625 C12orf74Q32Q52 190 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 SPATA3Q8NHX4 192 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 CSDC2Q9Y534 153 aaKnown RBP3.78□□□□□ -1.8
MATR3-211ENST00000505625 TAX1BP3O14907 124 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 MUC6Q6W4X9 2439 aa3.78□□□□□ -1.8
MATR3-211ENST00000505625 POLR3KQ9Y2Y1 108 aaPredicted RBP3.77□□□□□ -1.81
MATR3-211ENST00000505625 TRBV30A0A0K0K1B3 111 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 A0A1B0GXF2 115 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 RBX1P62877 108 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 IL15RAQ13261 267 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 CELA1Q9UNI1 258 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 A8MZ25 164 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 C6orf99Q4VX62 202 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 TOMM6Q96B49 74 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 MBD6Q96DN6 1003 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 APLNQ9ULZ1 77 aa3.77□□□□□ -1.81
MATR3-211ENST00000505625 SPANXB1Q9NS25 103 aaPredicted RBP3.77□□□□□ -1.81
MATR3-211ENST00000505625 TRBV24-1A0A075B6N3 115 aa3.76□□□□□ -1.81
MATR3-211ENST00000505625 RNASE3P12724 160 aaKnown RBP3.76□□□□□ -1.81
MATR3-211ENST00000505625 PHF5AQ7RTV0 110 aaKnown RBP3.76□□□□□ -1.81
MATR3-211ENST00000505625 ROS1P08922 2347 aa3.76□□□□□ -1.81
MATR3-211ENST00000505625 HIST1H2BKO60814 126 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms