RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 GCHFRP30047 84 aa1.27□□□□□ -2.21
HERC3-209ENST00000504994 UBE2D3P61077 147 aa1.27□□□□□ -2.21
HERC3-209ENST00000504994 UBE2D2P62837 147 aa1.27□□□□□ -2.21
HERC3-209ENST00000504994 PRB3Q04118 309 aaPredicted RBP1.27□□□□□ -2.21
HERC3-209ENST00000504994 SFTA2Q6UW10 78 aa1.27□□□□□ -2.21
HERC3-209ENST00000504994 PMCHL2Q9BQD1 86 aa1.27□□□□□ -2.21
HERC3-209ENST00000504994 LINC01558Q9Y6Z2 57 aa1.27□□□□□ -2.21
HERC3-209ENST00000504994 ANKRD26Q9UPS8 1709 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 ARHGEF5Q12774 1597 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 SHANK2Q9UPX8 1470 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 C10orf142B7Z368 130 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 IGLC1P0CG04 106 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 TMEM170BQ5T4T1 132 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 BAGE2Q86Y30 109 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 C9orf62Q8N4C0 152 aa1.26□□□□□ -2.21
HERC3-209ENST00000504994 FAM103A1Q9BTL3 118 aaKnown RBP1.26□□□□□ -2.21
HERC3-209ENST00000504994 MYO7AQ13402 2215 aa1.25□□□□□ -2.21
HERC3-209ENST00000504994 FAUP35544 74 aaKnown RBP1.25□□□□□ -2.21
HERC3-209ENST00000504994 PRO1933Q9H354 126 aa1.25□□□□□ -2.21
HERC3-209ENST00000504994 PRO1854Q9UHT4 67 aa1.25□□□□□ -2.21
HERC3-209ENST00000504994 KIF21AQ7Z4S6 1674 aa1.25□□□□□ -2.21
HERC3-209ENST00000504994 ATOX1O00244 68 aa1.24□□□□□ -2.21
HERC3-209ENST00000504994 ASIPP42127 132 aa1.24□□□□□ -2.21
HERC3-209ENST00000504994 C10orf95Q9H7T3 257 aa1.24□□□□□ -2.21
HERC3-209ENST00000504994 NPVFQ9HCQ7 196 aa1.24□□□□□ -2.21
HERC3-209ENST00000504994 BTAF1O14981 1849 aa1.24□□□□□ -2.21
HERC3-209ENST00000504994 COL4A6Q14031 1691 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 UQCR11O14957 56 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 NDUFC1O43677 76 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 SFT2D2O95562 160 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 TRAPPC2P0DI81 140 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 TRAPPC2BP0DI82 140 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 SMIM4Q8WVI0 70 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 LINC00472Q9H8W2 130 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 PROK2Q9HC23 129 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 FAIMQ9NVQ4 179 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 HMGXB3Q12766 1538 aa1.23□□□□□ -2.21
HERC3-209ENST00000504994 ANKRD36BQ8N2N9 1353 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 PLXNB2O15031 1838 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 APOC3P02656 99 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 GYPAP02724 150 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 COX6CP09669 75 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 PYY3Q5JQD4 70 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 SERP2Q8N6R1 65 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 NXT2Q9NPJ8 142 aaKnown RBP1.22□□□□□ -2.21
HERC3-209ENST00000504994 ARL2-SNX15V9GYD0 113 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 GAPVD1Q14C86 1478 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 TOP2BQ02880 1626 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 SBF2Q86WG5 1849 aa1.22□□□□□ -2.21
HERC3-209ENST00000504994 PRDM15P57071 1507 aaPredicted RBP1.21□□□□□ -2.22
HERC3-209ENST00000504994 ADGRL2O95490 1459 aa1.21□□□□□ -2.22
HERC3-209ENST00000504994 FYCO1Q9BQS8 1478 aa1.21□□□□□ -2.22
HERC3-209ENST00000504994 NMBP08949 121 aa1.21□□□□□ -2.22
HERC3-209ENST00000504994 TTC37Q6PGP7 1564 aa1.21□□□□□ -2.22
HERC3-209ENST00000504994 LAMC3Q9Y6N6 1575 aa1.21□□□□□ -2.22
HERC3-209ENST00000504994 FAM223AQ8IWN6 122 aa1.2□□□□□ -2.22
HERC3-209ENST00000504994 TRGV9Q99603 122 aa1.2□□□□□ -2.22
HERC3-209ENST00000504994 CACFD1Q9UGQ2 172 aa1.2□□□□□ -2.22
HERC3-209ENST00000504994 WNK3Q9BYP7 1800 aa1.19□□□□□ -2.22
HERC3-209ENST00000504994 A0A0G2JND7 137 aa1.19□□□□□ -2.22
HERC3-209ENST00000504994 TRBV7-7A0A0K0K1E9 115 aa1.19□□□□□ -2.22
HERC3-209ENST00000504994 EHBP1L1Q8N3D4 1523 aa1.19□□□□□ -2.22
HERC3-209ENST00000504994 MAGI1Q96QZ7 1491 aaPredicted RBP1.18□□□□□ -2.22
HERC3-209ENST00000504994 RAPGEF2Q9Y4G8 1499 aa1.18□□□□□ -2.22
HERC3-209ENST00000504994 TROQ12816 1431 aaPredicted RBP1.18□□□□□ -2.22
HERC3-209ENST00000504994 UQCRHLA0A096LP55 91 aa1.18□□□□□ -2.22
HERC3-209ENST00000504994 M0R3E3 92 aa1.18□□□□□ -2.22
HERC3-209ENST00000504994 C20orf78Q9BR46 151 aa1.18□□□□□ -2.22
HERC3-209ENST00000504994 SCN7AQ01118 1682 aa1.18□□□□□ -2.22
HERC3-209ENST00000504994 PLEKHH2Q8IVE3 1493 aa1.18□□□□□ -2.22
HERC3-209ENST00000504994 CADP27708 2225 aa1.17□□□□□ -2.22
HERC3-209ENST00000504994 BAZ1AQ9NRL2 1556 aaPredicted RBP1.17□□□□□ -2.22
HERC3-209ENST00000504994 SYS1-DBNDD2H3BUS1 97 aa1.17□□□□□ -2.22
HERC3-209ENST00000504994 K7EP34 96 aa1.17□□□□□ -2.22
HERC3-209ENST00000504994 PIN1P1O15428 100 aa1.17□□□□□ -2.22
HERC3-209ENST00000504994 COX17Q14061 63 aa1.17□□□□□ -2.22
HERC3-209ENST00000504994 PEA15Q15121 130 aa1.17□□□□□ -2.22
HERC3-209ENST00000504994 MYO7BQ6PIF6 2116 aa1.17□□□□□ -2.22
HERC3-209ENST00000504994 LRRC37A2A6NM11 1700 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 H7BZZ5 65 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 CYB5AP00167 134 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 PMCHL1Q16048 86 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 UBE2DNLQ8IWF7 75 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 LCN9Q8WX39 176 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 S100A16Q96FQ6 103 aaKnown RBP1.16□□□□□ -2.22
HERC3-209ENST00000504994 CRCT1Q9UGL9 99 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 DIP2CQ9Y2E4 1556 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 KDM3BQ7LBC6 1761 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 ZNF462Q96JM2 2506 aa1.16□□□□□ -2.22
HERC3-209ENST00000504994 PDCD11Q14690 1871 aaKnown RBP1.16□□□□□ -2.22
HERC3-209ENST00000504994 FAM223BA6NKX1 122 aa1.15□□□□□ -2.23
HERC3-209ENST00000504994 UQCRHP07919 91 aa1.15□□□□□ -2.23
HERC3-209ENST00000504994 SAA2P0DJI9 122 aaPredicted RBP1.15□□□□□ -2.23
HERC3-209ENST00000504994 SPINK7P58062 85 aa1.15□□□□□ -2.23
HERC3-209ENST00000504994 SSBP3-AS1Q7Z2R9 100 aa1.15□□□□□ -2.23
HERC3-209ENST00000504994 SPRR4Q96PI1 79 aa1.15□□□□□ -2.23
HERC3-209ENST00000504994 RB1CC1Q8TDY2 1594 aa1.15□□□□□ -2.23
HERC3-209ENST00000504994 MLH3Q9UHC1 1453 aa1.14□□□□□ -2.23
HERC3-209ENST00000504994 TRBV25-1A0A075B6N4 114 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms