RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
LINC02397-201ENST00000504409 ZFP36P26651 326 aaKnown RBP4.49□□□□□ -1.69
LINC02397-201ENST00000504409 MSMBP08118 114 aa4.49□□□□□ -1.69
LINC02397-201ENST00000504409 C6orf99Q4VX62 202 aa4.49□□□□□ -1.69
LINC02397-201ENST00000504409 LINC00322Q6ZN03 302 aaPredicted RBP4.49□□□□□ -1.69
LINC02397-201ENST00000504409 SMIM11BQ8TCY0 68 aa4.49□□□□□ -1.69
LINC02397-201ENST00000504409 C9orf66Q5T8R8 295 aa4.49□□□□□ -1.69
LINC02397-201ENST00000504409 C5orf56Q8N8D9 126 aa4.49□□□□□ -1.69
LINC02397-201ENST00000504409 Q6ZRU5 148 aa4.48□□□□□ -1.69
LINC02397-201ENST00000504409 NCR3O14931 201 aa4.48□□□□□ -1.69
LINC02397-201ENST00000504409 OXLD1Q5BKU9 147 aa4.48□□□□□ -1.69
LINC02397-201ENST00000504409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.48□□□□□ -1.69
LINC02397-201ENST00000504409 IGKV2-29A2NJV5 120 aaPredicted RBP4.48□□□□□ -1.69
LINC02397-201ENST00000504409 ANGP03950 147 aaKnown RBP4.48□□□□□ -1.69
LINC02397-201ENST00000504409 PRO0255Q9UI72 69 aa4.48□□□□□ -1.69
LINC02397-201ENST00000504409 KLK9Q2XQG4 91 aa4.48□□□□□ -1.69
LINC02397-201ENST00000504409 LYPD5Q6UWN5 251 aa4.48□□□□□ -1.69
LINC02397-201ENST00000504409 IGKV3-20P01619 116 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 NDPQ00604 133 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 IGHV3OR16-13A0A075B7E8 117 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 IGHV3-74A0A0B4J1X5 117 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 LY6HO94772 140 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 C11orf72Q8NBR9 251 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 MLANAQ16655 118 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 MSRB1Q9NZV6 116 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 IGHV3-35A0A0C4DH35 117 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 LOC100131303A0A0U1RQF7 123 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 GNRH2O43555 120 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 CRIP1P50238 77 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 CDKN2A-AS1Q9UH64 79 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 BRWD1-AS2P59051 145 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 LINC00269Q8N2A0 174 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 IGHV3-49A0A0A0MS15 119 aa4.47□□□□□ -1.69
LINC02397-201ENST00000504409 SMCPP49901 116 aaPredicted RBP4.46□□□□□ -1.69
LINC02397-201ENST00000504409 BRWD1Q9NSI6 2320 aa4.46□□□□□ -1.69
LINC02397-201ENST00000504409 FAM27E3Q08E93 113 aa4.46□□□□□ -1.7
LINC02397-201ENST00000504409 DEFB112Q30KQ8 113 aa4.46□□□□□ -1.7
LINC02397-201ENST00000504409 LY6LH3BQJ8 138 aa4.46□□□□□ -1.7
LINC02397-201ENST00000504409 TTTY13Q9BZ97 58 aa4.46□□□□□ -1.7
LINC02397-201ENST00000504409 Q9HAA7 133 aa4.46□□□□□ -1.7
LINC02397-201ENST00000504409 COL27A1Q8IZC6 1860 aaPredicted RBP4.46□□□□□ -1.7
LINC02397-201ENST00000504409 SNURFQ9Y675 71 aa4.46□□□□□ -1.7
LINC02397-201ENST00000504409 LY6G6DO95868 133 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 EDN2P20800 178 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 DEFB123Q8N688 67 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 SPATA3Q8NHX4 192 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 C2orf48Q96LS8 159 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 EGFEM1PQ0D2K5 195 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 SPTA1P02549 2419 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 IGHV3-73A0A0B4J1V6 119 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 LINC00575Q6W349 94 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 C17orf77Q96MU5 243 aa4.45□□□□□ -1.7
LINC02397-201ENST00000504409 K7EQG2 157 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 LINC01565O15544 149 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 RPL37AP61513 92 aaKnown RBP4.44□□□□□ -1.7
LINC02397-201ENST00000504409 Q8N9W7 124 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 SPART-AS1P0CW21 52 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 LY6EQ16553 131 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 C4orf26Q17RF5 130 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 FRMD6-AS1P0C7T7 363 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 IGKV4-1P06312 121 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 RNASE3P12724 160 aaKnown RBP4.44□□□□□ -1.7
LINC02397-201ENST00000504409 S4R3C0 116 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 C10orf25Q5T742 122 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 LINC00846Q9NV44 126 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 SMAD5-AS1Q9Y6J3 95 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 CDC42SE1Q9NRR8 79 aa4.44□□□□□ -1.7
LINC02397-201ENST00000504409 ACYP2P14621 99 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 Q6ZPA2 131 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 CDC42SE2Q9NRR3 84 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 COL6A6A6NMZ7 2263 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 MOBPQ13875 183 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 SPTAN1Q13813 2472 aaKnown RBP4.43□□□□□ -1.7
LINC02397-201ENST00000504409 C6orf223Q8N319 242 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 PINLYPA6NC86 204 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 Q9BRP9 147 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
LINC02397-201ENST00000504409 LINC00167Q96N53 147 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 ANKHD1Q8IWZ3 2542 aaKnown RBP4.42□□□□□ -1.7
LINC02397-201ENST00000504409 CADP27708 2225 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 ATRXP46100 2492 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 Q6ZS46 218 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 RPP25Q9BUL9 199 aaKnown RBP4.42□□□□□ -1.7
LINC02397-201ENST00000504409 AKAP6Q13023 2319 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 OBSCN-AS1Q96MR7 158 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 PSCAO43653 123 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 MDFIQ99750 246 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 CREBBPQ92793 2442 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 Q6ZQT0 140 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 E7EQL1 145 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 LYPD2Q6UXB3 125 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 REG3AQ06141 175 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 C3orf56Q8N813 242 aa4.42□□□□□ -1.7
LINC02397-201ENST00000504409 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
LINC02397-201ENST00000504409 IGHV4-38-2P0DP08 117 aa4.41□□□□□ -1.7
LINC02397-201ENST00000504409 GYPEP15421 78 aa4.41□□□□□ -1.7
LINC02397-201ENST00000504409 H0Y9P7 68 aa4.41□□□□□ -1.7
LINC02397-201ENST00000504409 H7BZZ5 65 aa4.41□□□□□ -1.7
LINC02397-201ENST00000504409 Q6ZQY7 126 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms