RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 TRAV4A0A0B4J268 109 aa13.44□□□□□ -0.26
SCARB2-203ENST00000502908 TRBV10-2A0A0K0K1G8 114 aa13.44□□□□□ -0.26
SCARB2-203ENST00000502908 IGHV3-53P01767 116 aa13.44□□□□□ -0.26
SCARB2-203ENST00000502908 RPL13AP40429 203 aaKnown RBP13.44□□□□□ -0.26
SCARB2-203ENST00000502908 C2orf82Q6UX34 121 aa13.44□□□□□ -0.26
SCARB2-203ENST00000502908 TMEM262E9PQX1 116 aa13.43□□□□□ -0.26
SCARB2-203ENST00000502908 H7C423 109 aa13.43□□□□□ -0.26
SCARB2-203ENST00000502908 DSCR9P59020 149 aa13.43□□□□□ -0.26
SCARB2-203ENST00000502908 DGAT2L7PQ6IED9 249 aa13.43□□□□□ -0.26
SCARB2-203ENST00000502908 LINC00694P0DN24 101 aa13.43□□□□□ -0.26
SCARB2-203ENST00000502908 ZFAND6Q6FIF0 208 aa13.43□□□□□ -0.26
SCARB2-203ENST00000502908 TMEM101Q96IK0 257 aa13.43□□□□□ -0.26
SCARB2-203ENST00000502908 CR1P17927 2039 aa13.43□□□□□ -0.26
SCARB2-203ENST00000502908 TEX29Q8N6K0 151 aa13.42□□□□□ -0.26
SCARB2-203ENST00000502908 PRB1P04280 392 aa13.41□□□□□ -0.26
SCARB2-203ENST00000502908 ANAPC13Q9BS18 74 aa13.41□□□□□ -0.26
SCARB2-203ENST00000502908 UBE2WQ96B02 151 aa13.41□□□□□ -0.26
SCARB2-203ENST00000502908 A8MTW9 85 aa13.4□□□□□ -0.26
SCARB2-203ENST00000502908 IGHV4-31P0DP07 118 aa13.4□□□□□ -0.26
SCARB2-203ENST00000502908 KRTAP10-9P60411 292 aa13.4□□□□□ -0.26
SCARB2-203ENST00000502908 J3QLI3 93 aa13.4□□□□□ -0.26
SCARB2-203ENST00000502908 CITED1Q99966 193 aa13.4□□□□□ -0.26
SCARB2-203ENST00000502908 Q9H8V8 135 aa13.4□□□□□ -0.26
SCARB2-203ENST00000502908 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
SCARB2-203ENST00000502908 TRAV13-1A0A0B4J241 112 aa13.39□□□□□ -0.27
SCARB2-203ENST00000502908 INSP01308 110 aa13.39□□□□□ -0.27
SCARB2-203ENST00000502908 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
SCARB2-203ENST00000502908 A0A1W2PRX2 142 aa13.39□□□□□ -0.27
SCARB2-203ENST00000502908 M0QXV9 152 aa13.39□□□□□ -0.27
SCARB2-203ENST00000502908 SNCGO76070 127 aa13.39□□□□□ -0.27
SCARB2-203ENST00000502908 PEMTQ9UBM1 199 aa13.39□□□□□ -0.27
SCARB2-203ENST00000502908 COX6CP09669 75 aa13.38□□□□□ -0.27
SCARB2-203ENST00000502908 DEFB114Q30KQ6 69 aa13.38□□□□□ -0.27
SCARB2-203ENST00000502908 CITED2Q99967 270 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-203ENST00000502908 SETXQ7Z333 2677 aaKnown RBP13.37□□□□□ -0.27
SCARB2-203ENST00000502908 RS1O15537 224 aa13.37□□□□□ -0.27
SCARB2-203ENST00000502908 FSHBP01225 129 aa13.37□□□□□ -0.27
SCARB2-203ENST00000502908 LINC00242Q5T6M2 205 aa13.37□□□□□ -0.27
SCARB2-203ENST00000502908 ODF3L2Q3SX64 289 aa13.36□□□□□ -0.27
SCARB2-203ENST00000502908 TTC32Q5I0X7 151 aa13.36□□□□□ -0.27
SCARB2-203ENST00000502908 NDUFA1O15239 70 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 GAGE2BQ13066 116 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 BEAN1Q3B7T3 259 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 GAGE2EQ4V326 116 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 GAGE2DQ9UEU5 116 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 Q6ZTI0 123 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 C1orf158Q8N1D5 194 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 C15orf53Q8NAA6 179 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 C4orf3Q8WVX3 66 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 CCDC168Q8NDH2 2452 aa13.35□□□□□ -0.27
SCARB2-203ENST00000502908 LST1O00453 97 aa13.34□□□□□ -0.27
SCARB2-203ENST00000502908 DNAJC30Q96LL9 226 aa13.34□□□□□ -0.27
SCARB2-203ENST00000502908 YAE1D1Q9NRH1 226 aa13.34□□□□□ -0.27
SCARB2-203ENST00000502908 SOSTDC1Q6X4U4 206 aa13.34□□□□□ -0.27
SCARB2-203ENST00000502908 LINC00308Q8TCZ7 52 aa13.34□□□□□ -0.27
SCARB2-203ENST00000502908 USP24Q9UPU5 2620 aa13.34□□□□□ -0.27
SCARB2-203ENST00000502908 NHLRC4P0CG21 123 aaPredicted RBP13.33□□□□□ -0.27
SCARB2-203ENST00000502908 NTM-AS1Q6ZSK4 140 aa13.33□□□□□ -0.27
SCARB2-203ENST00000502908 Q8N2B8 174 aa13.33□□□□□ -0.27
SCARB2-203ENST00000502908 GAGE12JA6NER3 117 aa13.33□□□□□ -0.28
SCARB2-203ENST00000502908 GAGE4Q13068 117 aa13.33□□□□□ -0.28
SCARB2-203ENST00000502908 GAGE5Q13069 117 aa13.33□□□□□ -0.28
SCARB2-203ENST00000502908 IGLV5-45A0A087WSX0 123 aa13.32□□□□□ -0.28
SCARB2-203ENST00000502908 TIRAPP58753 221 aa13.32□□□□□ -0.28
SCARB2-203ENST00000502908 PIK3CD-AS1Q5SR53 167 aa13.32□□□□□ -0.28
SCARB2-203ENST00000502908 STHQ8IWL8 128 aa13.32□□□□□ -0.28
SCARB2-203ENST00000502908 SMIM1B2RUZ4 78 aa13.31□□□□□ -0.28
SCARB2-203ENST00000502908 CIRBPQ14011 172 aaKnown RBP13.31□□□□□ -0.28
SCARB2-203ENST00000502908 MEIG1Q5JSS6 88 aa13.31□□□□□ -0.28
SCARB2-203ENST00000502908 HERVK_113P63121 156 aa13.3□□□□□ -0.28
SCARB2-203ENST00000502908 TIMM17BO60830 172 aa13.3□□□□□ -0.28
SCARB2-203ENST00000502908 IFITM1P13164 125 aa13.3□□□□□ -0.28
SCARB2-203ENST00000502908 PRIMA1Q86XR5 153 aa13.3□□□□□ -0.28
SCARB2-203ENST00000502908 H3BT86 120 aa13.29□□□□□ -0.28
SCARB2-203ENST00000502908 IGLV5-39A0A0G2JS06 123 aa13.29□□□□□ -0.28
SCARB2-203ENST00000502908 NDUFV3P56181 108 aaKnown RBP13.29□□□□□ -0.28
SCARB2-203ENST00000502908 ITPR3Q14573 2671 aa13.29□□□□□ -0.28
SCARB2-203ENST00000502908 APCP25054 2843 aa13.29□□□□□ -0.28
SCARB2-203ENST00000502908 IGKV3OR2-268A0A0C4DH90 116 aa13.28□□□□□ -0.28
SCARB2-203ENST00000502908 WFDC10AQ9H1F0 79 aa13.28□□□□□ -0.28
SCARB2-203ENST00000502908 NOP10Q9NPE3 64 aaKnown RBP13.28□□□□□ -0.28
SCARB2-203ENST00000502908 SS18L2Q9UHA2 77 aa13.28□□□□□ -0.28
SCARB2-203ENST00000502908 Q96MF0 132 aa13.28□□□□□ -0.28
SCARB2-203ENST00000502908 LOC100131303A0A0U1RQF7 123 aa13.27□□□□□ -0.28
SCARB2-203ENST00000502908 B5MCH6 92 aa13.27□□□□□ -0.28
SCARB2-203ENST00000502908 K7EQD1 137 aa13.27□□□□□ -0.28
SCARB2-203ENST00000502908 RPL36AP83881 106 aaKnown RBP13.27□□□□□ -0.28
SCARB2-203ENST00000502908 RPL36ALQ969Q0 106 aaKnown RBP13.27□□□□□ -0.28
SCARB2-203ENST00000502908 LINC01600Q96MT4 127 aa13.27□□□□□ -0.28
SCARB2-203ENST00000502908 PLA2G2AP14555 144 aa13.27□□□□□ -0.29
SCARB2-203ENST00000502908 UBR5O95071 2799 aaPredicted RBP13.27□□□□□ -0.29
SCARB2-203ENST00000502908 CCDC179H3BU77 68 aa13.25□□□□□ -0.29
SCARB2-203ENST00000502908 CDC42SE2Q9NRR3 84 aa13.25□□□□□ -0.29
SCARB2-203ENST00000502908 IL17DQ8TAD2 202 aa13.24□□□□□ -0.29
SCARB2-203ENST00000502908 FLNAP21333 2647 aaKnown RBP13.24□□□□□ -0.29
SCARB2-203ENST00000502908 F5H768 121 aa13.24□□□□□ -0.29
SCARB2-203ENST00000502908 GAGE7O76087 117 aa13.23□□□□□ -0.29
SCARB2-203ENST00000502908 GAGE12FP0CL80 117 aa13.23□□□□□ -0.29
SCARB2-203ENST00000502908 GAGE12GP0CL81 117 aa13.23□□□□□ -0.29
SCARB2-203ENST00000502908 GAGE12IP0CL82 117 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms