RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 CST9LQ9H4G1 147 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 F8VRH5 84 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 CEMP1Q6PRD7 247 aaPredicted RBP9.31□□□□□ -0.92
SGCA-203ENST00000502555 FAM104AQ969W3 186 aa9.31□□□□□ -0.92
SGCA-203ENST00000502555 OPRPNQ99935 248 aaPredicted RBP9.31□□□□□ -0.92
SGCA-203ENST00000502555 PLNP26678 52 aa9.3□□□□□ -0.92
SGCA-203ENST00000502555 C2orf88Q9BSF0 95 aa9.3□□□□□ -0.92
SGCA-203ENST00000502555 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
SGCA-203ENST00000502555 CHTOPQ9Y3Y2 248 aaKnown RBP9.3□□□□□ -0.92
SGCA-203ENST00000502555 TRAV8-6A0A0B4J262 113 aa9.29□□□□□ -0.92
SGCA-203ENST00000502555 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
SGCA-203ENST00000502555 DPM2O94777 84 aa9.29□□□□□ -0.92
SGCA-203ENST00000502555 S100A12P80511 92 aa9.29□□□□□ -0.92
SGCA-203ENST00000502555 CDPF1Q6NVV7 123 aa9.29□□□□□ -0.92
SGCA-203ENST00000502555 ZNF664Q8N3J9 261 aa9.29□□□□□ -0.92
SGCA-203ENST00000502555 PMCHL2Q9BQD1 86 aa9.29□□□□□ -0.92
SGCA-203ENST00000502555 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
SGCA-203ENST00000502555 HUWE1Q7Z6Z7 4374 aaKnown RBP9.28□□□□□ -0.92
SGCA-203ENST00000502555 NUPR2A6NF83 97 aa9.28□□□□□ -0.92
SGCA-203ENST00000502555 IGLL5B9A064 214 aa9.28□□□□□ -0.92
SGCA-203ENST00000502555 IGKCP01834 107 aa9.28□□□□□ -0.92
SGCA-203ENST00000502555 RBX1P62877 108 aa9.28□□□□□ -0.92
SGCA-203ENST00000502555 TMEM262E9PQX1 116 aa9.27□□□□□ -0.93
SGCA-203ENST00000502555 ESRGQ1W209 222 aa9.27□□□□□ -0.93
SGCA-203ENST00000502555 ZC2HC1BQ5TFG8 222 aa9.27□□□□□ -0.93
SGCA-203ENST00000502555 ATOH7Q8N100 152 aa9.27□□□□□ -0.93
SGCA-203ENST00000502555 VAMP8Q9BV40 100 aa9.27□□□□□ -0.93
SGCA-203ENST00000502555 IGLV4-69A0A075B6H9 119 aa9.26□□□□□ -0.93
SGCA-203ENST00000502555 IGLV4-60A0A075B6I1 120 aa9.26□□□□□ -0.93
SGCA-203ENST00000502555 TRAV9-2A0A087WT02 112 aa9.26□□□□□ -0.93
SGCA-203ENST00000502555 IGLC3P0DOY3 106 aa9.26□□□□□ -0.93
SGCA-203ENST00000502555 MPV17L2Q567V2 206 aa9.26□□□□□ -0.93
SGCA-203ENST00000502555 RNASE13Q5GAN3 156 aaKnown RBP9.26□□□□□ -0.93
SGCA-203ENST00000502555 HSBP1L1C9JCN9 74 aa9.25□□□□□ -0.93
SGCA-203ENST00000502555 UBE2D1P51668 147 aa9.25□□□□□ -0.93
SGCA-203ENST00000502555 NFE4Q86UQ8 179 aa9.25□□□□□ -0.93
SGCA-203ENST00000502555 KLK5Q9Y337 293 aaPredicted RBP9.25□□□□□ -0.93
SGCA-203ENST00000502555 CCL18P55774 89 aa9.24□□□□□ -0.93
SGCA-203ENST00000502555 TCTAP57738 103 aa9.24□□□□□ -0.93
SGCA-203ENST00000502555 CHAC1Q9BUX1 264 aa9.24□□□□□ -0.93
SGCA-203ENST00000502555 MRPS16Q9Y3D3 137 aaKnown RBP9.24□□□□□ -0.93
SGCA-203ENST00000502555 DNAH9Q9NYC9 4486 aa9.24□□□□□ -0.93
SGCA-203ENST00000502555 TINCRA0A1B0GVN0 87 aa9.23□□□□□ -0.93
SGCA-203ENST00000502555 C11orf86A6NJI1 115 aa9.23□□□□□ -0.93
SGCA-203ENST00000502555 SEC11AP67812 179 aa9.23□□□□□ -0.93
SGCA-203ENST00000502555 FAM19A3Q7Z5A8 133 aa9.23□□□□□ -0.93
SGCA-203ENST00000502555 A0A0J9YXV3 536 aa9.22□□□□□ -0.93
SGCA-203ENST00000502555 hDV102S1A0JD36 115 aa9.22□□□□□ -0.93
SGCA-203ENST00000502555 WFDC10BQ8IUB3 73 aa9.22□□□□□ -0.93
SGCA-203ENST00000502555 PAM16Q9Y3D7 125 aa9.22□□□□□ -0.93
SGCA-203ENST00000502555 COL7A1Q02388 2944 aa9.22□□□□□ -0.93
SGCA-203ENST00000502555 TRAV13-1A0A0B4J241 112 aa9.21□□□□□ -0.94
SGCA-203ENST00000502555 MAJINQ3KP22 176 aa9.21□□□□□ -0.94
SGCA-203ENST00000502555 SPATA45Q537H7 98 aa9.21□□□□□ -0.94
SGCA-203ENST00000502555 UPK3BQ9BT76 320 aa9.21□□□□□ -0.94
SGCA-203ENST00000502555 GEMIN7Q9H840 131 aaKnown RBP9.21□□□□□ -0.94
SGCA-203ENST00000502555 APLNQ9ULZ1 77 aa9.21□□□□□ -0.94
SGCA-203ENST00000502555 LINC00588Q9Y4M8 146 aa9.21□□□□□ -0.94
SGCA-203ENST00000502555 CCL25O15444 150 aa9.2□□□□□ -0.94
SGCA-203ENST00000502555 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
SGCA-203ENST00000502555 HERVK_113P63121 156 aa9.2□□□□□ -0.94
SGCA-203ENST00000502555 LINC01556Q5JQF7 62 aa9.2□□□□□ -0.94
SGCA-203ENST00000502555 LINC00242Q5T6M2 205 aa9.2□□□□□ -0.94
SGCA-203ENST00000502555 PRKDCP78527 4128 aaKnown RBP9.19□□□□□ -0.94
SGCA-203ENST00000502555 IGLV5-45A0A087WSX0 123 aa9.19□□□□□ -0.94
SGCA-203ENST00000502555 DNAH10OSP0CZ25 163 aa9.19□□□□□ -0.94
SGCA-203ENST00000502555 ZNF22P17026 224 aaPredicted RBP9.19□□□□□ -0.94
SGCA-203ENST00000502555 HERVK_113P61574 105 aa9.19□□□□□ -0.94
SGCA-203ENST00000502555 TMEM170BQ5T4T1 132 aa9.19□□□□□ -0.94
SGCA-203ENST00000502555 LINC00269Q8N2A0 174 aa9.19□□□□□ -0.94
SGCA-203ENST00000502555 Q8N3U1 123 aa9.19□□□□□ -0.94
SGCA-203ENST00000502555 STPG4Q8N801 248 aa9.19□□□□□ -0.94
SGCA-203ENST00000502555 LINC00959A0A1B0GUT2 108 aa9.18□□□□□ -0.94
SGCA-203ENST00000502555 REG3AQ06141 175 aa9.18□□□□□ -0.94
SGCA-203ENST00000502555 SS18Q15532 418 aa9.18□□□□□ -0.94
SGCA-203ENST00000502555 ANKRD39Q53RE8 183 aa9.18□□□□□ -0.94
SGCA-203ENST00000502555 PRR34Q9NV39 138 aa9.18□□□□□ -0.94
SGCA-203ENST00000502555 IGKV3OR2-268A0A0C4DH90 116 aa9.17□□□□□ -0.94
SGCA-203ENST00000502555 H3BRM9 83 aa9.17□□□□□ -0.94
SGCA-203ENST00000502555 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
SGCA-203ENST00000502555 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
SGCA-203ENST00000502555 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
SGCA-203ENST00000502555 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
SGCA-203ENST00000502555 LINC00469Q8N7U9 141 aa9.17□□□□□ -0.94
SGCA-203ENST00000502555 KLK12Q9UKR0 248 aa9.17□□□□□ -0.94
SGCA-203ENST00000502555 TMEM223A0PJW6 202 aa9.16□□□□□ -0.94
SGCA-203ENST00000502555 E9PLD3 99 aa9.16□□□□□ -0.94
SGCA-203ENST00000502555 TSTD3H0UI37 97 aa9.16□□□□□ -0.94
SGCA-203ENST00000502555 SIVA1O15304 175 aa9.16□□□□□ -0.94
SGCA-203ENST00000502555 MUC7Q8TAX7 377 aa9.16□□□□□ -0.94
SGCA-203ENST00000502555 WWC2-AS2Q96NR7 200 aa9.16□□□□□ -0.94
SGCA-203ENST00000502555 CRPP02741 224 aa9.15□□□□□ -0.94
SGCA-203ENST00000502555 CLPSL2Q6UWE3 100 aa9.15□□□□□ -0.94
SGCA-203ENST00000502555 CDKN2A-AS1Q9UH64 79 aa9.15□□□□□ -0.94
SGCA-203ENST00000502555 K7EP13 123 aa9.14□□□□□ -0.95
SGCA-203ENST00000502555 COX6A2Q02221 97 aa9.14□□□□□ -0.95
SGCA-203ENST00000502555 UBE2DNLQ8IWF7 75 aa9.14□□□□□ -0.95
SGCA-203ENST00000502555 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
SGCA-203ENST00000502555 IGHV3OR16-9A0A0B4J2B5 98 aa9.13□□□□□ -0.95
SGCA-203ENST00000502555 COX8AP10176 69 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms