RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 HMGA2P52926 109 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 RPL38P63173 70 aaKnown RBP2.39□□□□□ -2.03
SUB1-202ENST00000502453 SPANXA2-OT1Q8N9U9 137 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 CMC2Q9NRP2 79 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 TRAV22A0A0B4J277 110 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 A0A0J9YX75 114 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 AKAP9Q99996 3911 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 MYMXA0A1B0GTQ4 84 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 HCG22E2RYF7 251 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 SIP14410 1827 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 RP1P56715 2156 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 MOBPQ13875 183 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 KRTAP24-1Q3LI83 254 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 SPANXN1Q5VSR9 72 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 C6orf201Q7Z4U5 140 aa2.39□□□□□ -2.03
SUB1-202ENST00000502453 MUC4Q99102 2169 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 MGAQ8IWI9 3026 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 TRBV7-3A0A075B6L6 115 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 IGLV3-32A0A0A0MS00 114 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 TEX49A0A1B0GTD5 131 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 NDUFA11Q86Y39 141 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 LINC00612Q8N6U2 182 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 TMEM254Q8TBM7 123 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 MED13Q9UHV7 2174 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 MYOFQ9NZM1 2061 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 DYNAPQ8N1N2 210 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 FAM215AQ9Y5M1 114 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 PCDH15Q96QU1 1955 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 TMSB15BA0A087X1C1 80 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 MIFP14174 115 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 SFTA2Q6UW10 78 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 KRTAP1-3Q8IUG1 177 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 C14orf132Q9NPU4 83 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 CSMD2Q7Z408 3487 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 BPTFQ12830 3046 aa2.38□□□□□ -2.03
SUB1-202ENST00000502453 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 IGLV4-69A0A075B6H9 119 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 IGKV3D-15A0A087WSY6 115 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 EIF4EBP1Q13541 118 aaPredicted RBP2.37□□□□□ -2.03
SUB1-202ENST00000502453 C9orf116Q5BN46 136 aaPredicted RBP2.37□□□□□ -2.03
SUB1-202ENST00000502453 CDC42SE1Q9NRR8 79 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 PANO1I0J062 215 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 CAV3P56539 151 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 SERF2P84101 59 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 ZNF826PQ6ZT77 177 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 UBALD1Q8TB05 177 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 C20orf166-AS1Q96NR2 134 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 ATMQ13315 3056 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 HMGN2P05204 90 aaKnown RBP2.37□□□□□ -2.03
SUB1-202ENST00000502453 ERHP84090 104 aaKnown RBP2.37□□□□□ -2.03
SUB1-202ENST00000502453 LINC00483Q53H64 154 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 C20orf197Q8N268 126 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 FAM167A-AS1Q96KT0 104 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 GNG13Q9P2W3 67 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 MPDZO75970 2070 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 Q5W150 140 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 KLF14Q8TD94 323 aaPredicted RBP2.37□□□□□ -2.03
SUB1-202ENST00000502453 CYP4F30PQ9H0H9 118 aa2.37□□□□□ -2.03
SUB1-202ENST00000502453 SHROOM3Q8TF72 1996 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 TRBV25-1A0A075B6N4 114 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 TMEM30CPA0ZSE6 113 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 F8WEM9 126 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 UBE2D1P51668 147 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 NDPQ00604 133 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 DEFB113Q30KQ7 82 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 TIMM21Q9BVV7 248 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 PSENENQ9NZ42 101 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 SDHAF1A6NFY7 115 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 HMGA1P17096 107 aaKnown RBP2.36□□□□□ -2.03
SUB1-202ENST00000502453 MIR22HGQ0VDD5 57 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 Q8N6K4 173 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 IFI27L1Q96BM0 104 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 UBE2D4Q9Y2X8 147 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 S4R3C0 116 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 ITPR1Q14643 2758 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 TRAV10A0A0B4J240 114 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 Q8NAQ8 132 aa2.36□□□□□ -2.03
SUB1-202ENST00000502453 SPANXN5Q5MJ07 72 aa2.35□□□□□ -2.03
SUB1-202ENST00000502453 Q8N9P0 234 aaPredicted RBP2.35□□□□□ -2.03
SUB1-202ENST00000502453 NCOA6Q14686 2063 aaPredicted RBP2.35□□□□□ -2.03
SUB1-202ENST00000502453 ZNF462Q96JM2 2506 aa2.35□□□□□ -2.03
SUB1-202ENST00000502453 Q6JHZ5 121 aa2.35□□□□□ -2.03
SUB1-202ENST00000502453 ST20-AS1Q8NBB2 130 aa2.35□□□□□ -2.03
SUB1-202ENST00000502453 DMXL2Q8TDJ6 3036 aa2.35□□□□□ -2.03
SUB1-202ENST00000502453 DYNLRB1Q9NP97 96 aa2.35□□□□□ -2.03
SUB1-202ENST00000502453 HEATR5BQ9P2D3 2071 aa2.35□□□□□ -2.03
SUB1-202ENST00000502453 BDP1A6H8Y1 2624 aa2.35□□□□□ -2.03
SUB1-202ENST00000502453 FXYD6P3P58550 94 aa2.34□□□□□ -2.03
SUB1-202ENST00000502453 Q8TAT8 98 aa2.34□□□□□ -2.03
SUB1-202ENST00000502453 PRO1854Q9UHT4 67 aa2.34□□□□□ -2.03
SUB1-202ENST00000502453 CACNA1DQ01668 2161 aa2.34□□□□□ -2.03
SUB1-202ENST00000502453 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.04
SUB1-202ENST00000502453 IGKV3D-11A0A0A0MRZ8 115 aa2.34□□□□□ -2.04
SUB1-202ENST00000502453 A0A1B0GWA3 101 aa2.34□□□□□ -2.04
SUB1-202ENST00000502453 LINC01549A6NIU2 74 aa2.34□□□□□ -2.04
SUB1-202ENST00000502453 ZNF469Q96JG9 3925 aaPredicted RBP2.34□□□□□ -2.04
SUB1-202ENST00000502453 MALRD1Q5VYJ5 2156 aa2.34□□□□□ -2.04
SUB1-202ENST00000502453 CEBPZOSA8MTT3 80 aa2.34□□□□□ -2.04
SUB1-202ENST00000502453 ERC2-IT1O76042 136 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms