RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 ATP5LO75964 103 aa13.34□□□□□ -0.27
SCAMP3-209ENST00000497470 ZNF664Q8N3J9 261 aa13.34□□□□□ -0.27
SCAMP3-209ENST00000497470 IGLV4-60A0A075B6I1 120 aa13.33□□□□□ -0.28
SCAMP3-209ENST00000497470 TRAV8-4A0A0B4J246 113 aa13.33□□□□□ -0.28
SCAMP3-209ENST00000497470 MIAQ16674 131 aa13.33□□□□□ -0.28
SCAMP3-209ENST00000497470 Q8N976 141 aa13.33□□□□□ -0.28
SCAMP3-209ENST00000497470 IGHV3-30P01768 117 aa13.32□□□□□ -0.28
SCAMP3-209ENST00000497470 IGHV3-33P01772 117 aa13.32□□□□□ -0.28
SCAMP3-209ENST00000497470 ANGP03950 147 aaKnown RBP13.32□□□□□ -0.28
SCAMP3-209ENST00000497470 IGHV3-30-3P0DP02 117 aa13.32□□□□□ -0.28
SCAMP3-209ENST00000497470 IGHV3-30-5P0DP03 117 aa13.32□□□□□ -0.28
SCAMP3-209ENST00000497470 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
SCAMP3-209ENST00000497470 SCGB3A1Q96QR1 104 aa13.32□□□□□ -0.28
SCAMP3-209ENST00000497470 COX11Q9Y6N1 276 aa13.32□□□□□ -0.28
SCAMP3-209ENST00000497470 Q6ZN92 141 aa13.31□□□□□ -0.28
SCAMP3-209ENST00000497470 FAM104AQ969W3 186 aa13.31□□□□□ -0.28
SCAMP3-209ENST00000497470 AMELXQ99217 191 aa13.31□□□□□ -0.28
SCAMP3-209ENST00000497470 KLK12Q9UKR0 248 aa13.31□□□□□ -0.28
SCAMP3-209ENST00000497470 PLECQ15149 4684 aaKnown RBP13.31□□□□□ -0.28
SCAMP3-209ENST00000497470 IGLV4-3A0A075B6K6 122 aa13.3□□□□□ -0.28
SCAMP3-209ENST00000497470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.3□□□□□ -0.28
SCAMP3-209ENST00000497470 NDUFA6P56556 154 aa13.3□□□□□ -0.28
SCAMP3-209ENST00000497470 REG3AQ06141 175 aa13.3□□□□□ -0.28
SCAMP3-209ENST00000497470 RMI2Q96E14 147 aa13.3□□□□□ -0.28
SCAMP3-209ENST00000497470 NUPR1O60356 82 aa13.29□□□□□ -0.28
SCAMP3-209ENST00000497470 CRPP02741 224 aa13.28□□□□□ -0.28
SCAMP3-209ENST00000497470 S100A6P06703 90 aa13.28□□□□□ -0.28
SCAMP3-209ENST00000497470 ENHOQ6UWT2 76 aa13.28□□□□□ -0.28
SCAMP3-209ENST00000497470 LINC00269Q8N2A0 174 aa13.28□□□□□ -0.28
SCAMP3-209ENST00000497470 Q8N3U1 123 aa13.28□□□□□ -0.28
SCAMP3-209ENST00000497470 HSPB8Q9UJY1 196 aa13.28□□□□□ -0.28
SCAMP3-209ENST00000497470 LEPROTL1O95214 131 aa13.27□□□□□ -0.29
SCAMP3-209ENST00000497470 TEX43Q6ZNM6 134 aa13.27□□□□□ -0.29
SCAMP3-209ENST00000497470 FAM19A3Q7Z5A8 133 aa13.27□□□□□ -0.29
SCAMP3-209ENST00000497470 TM2D2Q9BX73 214 aa13.27□□□□□ -0.29
SCAMP3-209ENST00000497470 KRTAP1-5Q9BYS1 174 aa13.27□□□□□ -0.29
SCAMP3-209ENST00000497470 VCX2Q9H322 139 aa13.27□□□□□ -0.29
SCAMP3-209ENST00000497470 Q6ZUT4 128 aa13.26□□□□□ -0.29
SCAMP3-209ENST00000497470 FAM19A2Q8N3H0 131 aa13.26□□□□□ -0.29
SCAMP3-209ENST00000497470 C2orf88Q9BSF0 95 aa13.26□□□□□ -0.29
SCAMP3-209ENST00000497470 SEC11AP67812 179 aa13.25□□□□□ -0.29
SCAMP3-209ENST00000497470 PMCHL1Q16048 86 aa13.25□□□□□ -0.29
SCAMP3-209ENST00000497470 UBE2WQ96B02 151 aa13.25□□□□□ -0.29
SCAMP3-209ENST00000497470 LINC00959A0A1B0GUT2 108 aa13.24□□□□□ -0.29
SCAMP3-209ENST00000497470 PMVKQ15126 192 aa13.24□□□□□ -0.29
SCAMP3-209ENST00000497470 SS18Q15532 418 aa13.24□□□□□ -0.29
SCAMP3-209ENST00000497470 IFI27L1Q96BM0 104 aa13.24□□□□□ -0.29
SCAMP3-209ENST00000497470 TRAV12-1A0A0B4J245 112 aa13.23□□□□□ -0.29
SCAMP3-209ENST00000497470 LINC00173Q6ZV60 143 aa13.23□□□□□ -0.29
SCAMP3-209ENST00000497470 C6orf223Q8N319 242 aa13.23□□□□□ -0.29
SCAMP3-209ENST00000497470 C5orf52A6NGY3 159 aa13.22□□□□□ -0.29
SCAMP3-209ENST00000497470 BAALCQ8WXS3 180 aa13.22□□□□□ -0.29
SCAMP3-209ENST00000497470 C1orf43Q9BWL3 253 aa13.22□□□□□ -0.29
SCAMP3-209ENST00000497470 C1orf134Q5TEV5 83 aa13.21□□□□□ -0.29
SCAMP3-209ENST00000497470 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.29
SCAMP3-209ENST00000497470 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.29
SCAMP3-209ENST00000497470 CST9LQ9H4G1 147 aa13.21□□□□□ -0.29
SCAMP3-209ENST00000497470 VPS13DQ5THJ4 4388 aa13.2□□□□□ -0.3
SCAMP3-209ENST00000497470 IFITM10A6NMD0 228 aa13.2□□□□□ -0.3
SCAMP3-209ENST00000497470 UBE2D1P51668 147 aa13.2□□□□□ -0.3
SCAMP3-209ENST00000497470 HIST3H2BBQ8N257 126 aa13.2□□□□□ -0.3
SCAMP3-209ENST00000497470 ALMS1Q8TCU4 4167 aa13.2□□□□□ -0.3
SCAMP3-209ENST00000497470 KRTAP26-1Q6PEX3 210 aa13.19□□□□□ -0.3
SCAMP3-209ENST00000497470 CD164L2Q6UWJ8 174 aa13.19□□□□□ -0.3
SCAMP3-209ENST00000497470 Q6ZRN7 208 aaPredicted RBP13.19□□□□□ -0.3
SCAMP3-209ENST00000497470 LINC01561Q8N1V8 128 aa13.18□□□□□ -0.3
SCAMP3-209ENST00000497470 PRSS29PA6NIE9 313 aa13.17□□□□□ -0.3
SCAMP3-209ENST00000497470 M0R2N4 97 aa13.17□□□□□ -0.3
SCAMP3-209ENST00000497470 PRSS1P07477 247 aa13.17□□□□□ -0.3
SCAMP3-209ENST00000497470 S100A2P29034 98 aa13.17□□□□□ -0.3
SCAMP3-209ENST00000497470 CHCHD10Q8WYQ3 142 aaPredicted RBP13.17□□□□□ -0.3
SCAMP3-209ENST00000497470 MAP1LC3CQ9BXW4 147 aa13.17□□□□□ -0.3
SCAMP3-209ENST00000497470 TRAV13-1A0A0B4J241 112 aa13.16□□□□□ -0.3
SCAMP3-209ENST00000497470 TINCRA0A1B0GVN0 87 aa13.16□□□□□ -0.3
SCAMP3-209ENST00000497470 SNRPEP62304 92 aaKnown RBP13.16□□□□□ -0.3
SCAMP3-209ENST00000497470 HERVK_113P63121 156 aa13.16□□□□□ -0.3
SCAMP3-209ENST00000497470 LINC00242Q5T6M2 205 aa13.16□□□□□ -0.3
SCAMP3-209ENST00000497470 IGKV2D-24A0A075B6R9 120 aa13.15□□□□□ -0.3
SCAMP3-209ENST00000497470 IGHV3OR16-9A0A0B4J2B5 98 aa13.15□□□□□ -0.3
SCAMP3-209ENST00000497470 AKR1D1P51857 326 aa13.15□□□□□ -0.3
SCAMP3-209ENST00000497470 RNASE13Q5GAN3 156 aaKnown RBP13.15□□□□□ -0.3
SCAMP3-209ENST00000497470 Q9HAA7 133 aa13.15□□□□□ -0.3
SCAMP3-209ENST00000497470 FABP4P15090 132 aa13.14□□□□□ -0.31
SCAMP3-209ENST00000497470 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
SCAMP3-209ENST00000497470 HIST1H2BLQ99880 126 aa13.14□□□□□ -0.31
SCAMP3-209ENST00000497470 DNAH1Q9P2D7 4330 aa13.13□□□□□ -0.31
SCAMP3-209ENST00000497470 IGLV5-45A0A087WSX0 123 aa13.13□□□□□ -0.31
SCAMP3-209ENST00000497470 IGLC3P0DOY3 106 aa13.13□□□□□ -0.31
SCAMP3-209ENST00000497470 PET117Q6UWS5 81 aa13.13□□□□□ -0.31
SCAMP3-209ENST00000497470 LYSTQ99698 3801 aa13.13□□□□□ -0.31
SCAMP3-209ENST00000497470 F8VRH5 84 aa13.12□□□□□ -0.31
SCAMP3-209ENST00000497470 SYS1-DBNDD2H3BUS1 97 aa13.12□□□□□ -0.31
SCAMP3-209ENST00000497470 FOXI1Q12951 378 aa13.12□□□□□ -0.31
SCAMP3-209ENST00000497470 LINC00336Q6ZUF6 198 aa13.12□□□□□ -0.31
SCAMP3-209ENST00000497470 IGKV3OR2-268A0A0C4DH90 116 aa13.11□□□□□ -0.31
SCAMP3-209ENST00000497470 ODF1Q14990 250 aa13.11□□□□□ -0.31
SCAMP3-209ENST00000497470 CFAP161Q6P656 301 aa13.11□□□□□ -0.31
SCAMP3-209ENST00000497470 IGLV10-54A0A075B6I4 117 aa13.1□□□□□ -0.31
SCAMP3-209ENST00000497470 A0A087WZ39 114 aa13.1□□□□□ -0.31
SCAMP3-209ENST00000497470 PSCAO43653 123 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms