RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 IGHV1-58A0A0C4DH39 117 aa6.14□□□□□ -1.43
EPHA4-213ENST00000495693 GIG44P09565 113 aaPredicted RBP6.14□□□□□ -1.43
EPHA4-213ENST00000495693 RPL24P83731 157 aaKnown RBP6.14□□□□□ -1.43
EPHA4-213ENST00000495693 AMMECR1LQ6DCA0 310 aa6.14□□□□□ -1.43
EPHA4-213ENST00000495693 MAPKAPK5-AS1Q8N8E1 139 aa6.14□□□□□ -1.43
EPHA4-213ENST00000495693 SLC25A29Q8N8R3 303 aa6.14□□□□□ -1.43
EPHA4-213ENST00000495693 ZNF479Q96JC4 524 aa6.14□□□□□ -1.43
EPHA4-213ENST00000495693 TMEM243Q9BU79 118 aa6.14□□□□□ -1.43
EPHA4-213ENST00000495693 NHP2Q9NX24 153 aaKnown RBP6.14□□□□□ -1.43
EPHA4-213ENST00000495693 ZFHX3Q15911 3703 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 CRYBG3Q68DQ2 2970 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.13□□□□□ -1.43
EPHA4-213ENST00000495693 A0A1B0GWB2 263 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 A0A1W2PPM0 123 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 PLAC8L1A1L4L8 177 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 H3BUT2 72 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 GAGE7O76087 117 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 MALP21145 153 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 SFTA2Q6UW10 78 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 LINC00612Q8N6U2 182 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 WFDC9Q8NEX5 89 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 PHLDA1Q8WV24 401 aaPredicted RBP6.13□□□□□ -1.43
EPHA4-213ENST00000495693 AGRNO00468 2067 aa6.13□□□□□ -1.43
EPHA4-213ENST00000495693 A0A0J9YXV3 536 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 A0A0J9YY99 117 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 K7EP34 96 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 TIMM17BO60830 172 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 POLQO75417 2590 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 MIFP14174 115 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 UBE2D1P51668 147 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 FXYD2P54710 66 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 KRTAP10-3P60369 221 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 CIRBPQ14011 172 aaKnown RBP6.12□□□□□ -1.43
EPHA4-213ENST00000495693 ITPR3Q14573 2671 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 SH2D6Q7Z4S9 175 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 TTTY13Q9BZ97 58 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 CSMD2Q7Z408 3487 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 CELSR1Q9NYQ6 3014 aa6.12□□□□□ -1.43
EPHA4-213ENST00000495693 CELSR2Q9HCU4 2923 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-213ENST00000495693 IGKV2-29A2NJV5 120 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-213ENST00000495693 GAGE12JA6NER3 117 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 CCL25O15444 150 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 PRM2P04554 102 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 EMP1P54849 157 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 GAGE4Q13068 117 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 GAGE5Q13069 117 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 C12orf74Q32Q52 190 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 HIST2H2BDQ6DRA6 164 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 Q6ZUT4 128 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-213ENST00000495693 WFDC10AQ9H1F0 79 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 PRO0255Q9UI72 69 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 SPCS1Q9Y6A9 102 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 ABCA12Q86UK0 2595 aa6.11□□□□□ -1.43
EPHA4-213ENST00000495693 HIVEP2P31629 2446 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 IGHV3-38A0A0C4DH36 116 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 A0A0J9YXY3 114 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 IGHV3-30-3P0DP02 117 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 IFITM1P13164 125 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 HERV-K104P63124 156 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 FOXI1Q12951 378 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 ZFAND6Q6FIF0 208 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 SBSPONQ8IVN8 264 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 RAB37Q96AX2 223 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 RNF183Q96D59 192 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
EPHA4-213ENST00000495693 PDZD2O15018 2839 aa6.09□□□□□ -1.43
EPHA4-213ENST00000495693 TRBV6-8A0A0A6YYG3 113 aa6.09□□□□□ -1.43
EPHA4-213ENST00000495693 K7EP13 123 aa6.09□□□□□ -1.43
EPHA4-213ENST00000495693 OPRPNQ99935 248 aaPredicted RBP6.09□□□□□ -1.43
EPHA4-213ENST00000495693 SPANXDQ9BXN6 97 aa6.09□□□□□ -1.43
EPHA4-213ENST00000495693 PPDPFQ9H3Y8 114 aa6.09□□□□□ -1.43
EPHA4-213ENST00000495693 CDC42SE2Q9NRR3 84 aa6.09□□□□□ -1.43
EPHA4-213ENST00000495693 SPANXCQ9NY87 97 aa6.09□□□□□ -1.43
EPHA4-213ENST00000495693 NDUFA12Q9UI09 145 aa6.09□□□□□ -1.43
EPHA4-213ENST00000495693 TRBV20-1A0A075B6N2 111 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 TRAV26-1A0A087WT03 109 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 A0A0B4J2C4 111 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 IGLL5B9A064 214 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 K7ERU9 68 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 NDUFA1O15239 70 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 IGHV3-30P01768 117 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 LINC00694P0DN24 101 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 IGHV3-30-5P0DP03 117 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 PRIMA1Q86XR5 153 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 TEX15Q9BXT5 2789 aa6.08□□□□□ -1.44
EPHA4-213ENST00000495693 F8W1H4 67 aa6.07□□□□□ -1.44
EPHA4-213ENST00000495693 SPART-AS1P0CW21 52 aa6.07□□□□□ -1.44
EPHA4-213ENST00000495693 ATP6V0E2Q8NHE4 81 aa6.07□□□□□ -1.44
EPHA4-213ENST00000495693 DEFB104AQ8WTQ1 72 aa6.07□□□□□ -1.44
EPHA4-213ENST00000495693 FLNAP21333 2647 aaKnown RBP6.07□□□□□ -1.44
EPHA4-213ENST00000495693 NACAE9PAV3 2078 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 A0A1B0GUV1 79 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 A8MZ25 164 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 J3QR89 54 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms