RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PEMTQ9UBM1 199 aa9.39□□□□□ -0.91
PTPN7-217ENST00000495688 NDUFA7O95182 113 aa9.39□□□□□ -0.91
PTPN7-217ENST00000495688 DEFB114Q30KQ6 69 aa9.39□□□□□ -0.91
PTPN7-217ENST00000495688 LINC01620Q4KN68 170 aa9.39□□□□□ -0.91
PTPN7-217ENST00000495688 NTN5Q8WTR8 489 aaPredicted RBP9.39□□□□□ -0.91
PTPN7-217ENST00000495688 GEMIN7Q9H840 131 aaKnown RBP9.39□□□□□ -0.91
PTPN7-217ENST00000495688 ACANP16112 2415 aa9.39□□□□□ -0.91
PTPN7-217ENST00000495688 A0A1B0GV72 72 aa9.38□□□□□ -0.91
PTPN7-217ENST00000495688 COX6A2Q02221 97 aa9.38□□□□□ -0.91
PTPN7-217ENST00000495688 MIAQ16674 131 aa9.38□□□□□ -0.91
PTPN7-217ENST00000495688 TEX49A0A1B0GTD5 131 aa9.38□□□□□ -0.91
PTPN7-217ENST00000495688 ATXN8Q156A1 80 aa9.38□□□□□ -0.91
PTPN7-217ENST00000495688 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
PTPN7-217ENST00000495688 TRBV30A0A0K0K1B3 111 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 A0A0U1RRA0 63 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 INSP01308 110 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 LINC00694P0DN24 101 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 ZNF625Q96I27 306 aaPredicted RBP9.37□□□□□ -0.91
PTPN7-217ENST00000495688 SPANXDQ9BXN6 97 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 SPANXCQ9NY87 97 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 BEAN1Q3B7T3 259 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 ZFAND6Q6FIF0 208 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 Q8N2B8 174 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 CLEC2BQ92478 149 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 ICOSQ9Y6W8 199 aa9.37□□□□□ -0.91
PTPN7-217ENST00000495688 A0A1W2PRX2 142 aa9.36□□□□□ -0.91
PTPN7-217ENST00000495688 DGAT2L7PQ6IED9 249 aa9.36□□□□□ -0.91
PTPN7-217ENST00000495688 TMEM101Q96IK0 257 aa9.36□□□□□ -0.91
PTPN7-217ENST00000495688 RS1O15537 224 aa9.36□□□□□ -0.91
PTPN7-217ENST00000495688 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
PTPN7-217ENST00000495688 TRGV1A0A0A0MS02 117 aa9.35□□□□□ -0.91
PTPN7-217ENST00000495688 C1orf158Q8N1D5 194 aa9.35□□□□□ -0.91
PTPN7-217ENST00000495688 BBC3Q96PG8 261 aaPredicted RBP9.35□□□□□ -0.91
PTPN7-217ENST00000495688 Q96MF0 132 aa9.35□□□□□ -0.91
PTPN7-217ENST00000495688 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
PTPN7-217ENST00000495688 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
PTPN7-217ENST00000495688 Q6ZTI0 123 aa9.33□□□□□ -0.92
PTPN7-217ENST00000495688 TRAV13-1A0A0B4J241 112 aa9.33□□□□□ -0.92
PTPN7-217ENST00000495688 TRBV10-2A0A0K0K1G8 114 aa9.33□□□□□ -0.92
PTPN7-217ENST00000495688 H7C423 109 aa9.33□□□□□ -0.92
PTPN7-217ENST00000495688 RPL13AP40429 203 aaKnown RBP9.33□□□□□ -0.92
PTPN7-217ENST00000495688 STHQ8IWL8 128 aa9.33□□□□□ -0.92
PTPN7-217ENST00000495688 Q9H8V8 135 aa9.33□□□□□ -0.92
PTPN7-217ENST00000495688 TENM4Q6N022 2769 aa9.32□□□□□ -0.92
PTPN7-217ENST00000495688 M0QXV9 152 aa9.32□□□□□ -0.92
PTPN7-217ENST00000495688 NTM-AS1Q6ZSK4 140 aa9.32□□□□□ -0.92
PTPN7-217ENST00000495688 NBEAL2Q6ZNJ1 2754 aa9.32□□□□□ -0.92
PTPN7-217ENST00000495688 DEFB113Q30KQ7 82 aa9.32□□□□□ -0.92
PTPN7-217ENST00000495688 IGLV5-45A0A087WSX0 123 aa9.31□□□□□ -0.92
PTPN7-217ENST00000495688 NDUFA1O15239 70 aa9.31□□□□□ -0.92
PTPN7-217ENST00000495688 CRLF1O75462 422 aa9.31□□□□□ -0.92
PTPN7-217ENST00000495688 C2orf82Q6UX34 121 aa9.31□□□□□ -0.92
PTPN7-217ENST00000495688 CITED2Q99967 270 aaPredicted RBP9.31□□□□□ -0.92
PTPN7-217ENST00000495688 GCN1Q92616 2671 aaKnown RBP9.31□□□□□ -0.92
PTPN7-217ENST00000495688 TRAV26-1A0A087WT03 109 aa9.31□□□□□ -0.92
PTPN7-217ENST00000495688 TMEM262E9PQX1 116 aa9.31□□□□□ -0.92
PTPN7-217ENST00000495688 TIRAPP58753 221 aa9.31□□□□□ -0.92
PTPN7-217ENST00000495688 FN1P02751 2386 aaKnown RBP9.31□□□□□ -0.92
PTPN7-217ENST00000495688 ITPR2Q14571 2701 aa9.3□□□□□ -0.92
PTPN7-217ENST00000495688 TRAV4A0A0B4J268 109 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 GAGE12JA6NER3 117 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 COX6CP09669 75 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 GAGE4Q13068 117 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 GAGE5Q13069 117 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 IGLV5-39A0A0G2JS06 123 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 SMIM1B2RUZ4 78 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 IL17DQ8TAD2 202 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 LINC00308Q8TCZ7 52 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 YAE1D1Q9NRH1 226 aa9.29□□□□□ -0.92
PTPN7-217ENST00000495688 NOP10Q9NPE3 64 aaKnown RBP9.28□□□□□ -0.92
PTPN7-217ENST00000495688 K7EQD1 137 aa9.28□□□□□ -0.92
PTPN7-217ENST00000495688 TIMM17BO60830 172 aa9.28□□□□□ -0.92
PTPN7-217ENST00000495688 HERVK_113P63121 156 aa9.28□□□□□ -0.92
PTPN7-217ENST00000495688 KRTAP1-3Q8IUG1 177 aa9.28□□□□□ -0.92
PTPN7-217ENST00000495688 RNF183Q96D59 192 aa9.28□□□□□ -0.92
PTPN7-217ENST00000495688 CITED1Q99966 193 aa9.28□□□□□ -0.92
PTPN7-217ENST00000495688 LST1O00453 97 aa9.28□□□□□ -0.92
PTPN7-217ENST00000495688 PLA2G2AP14555 144 aa9.28□□□□□ -0.92
PTPN7-217ENST00000495688 RPL36AP83881 106 aaKnown RBP9.28□□□□□ -0.92
PTPN7-217ENST00000495688 RPL36ALQ969Q0 106 aaKnown RBP9.28□□□□□ -0.92
PTPN7-217ENST00000495688 CCL24O00175 119 aa9.27□□□□□ -0.93
PTPN7-217ENST00000495688 IFITM1P13164 125 aa9.27□□□□□ -0.93
PTPN7-217ENST00000495688 LOC100131303A0A0U1RQF7 123 aa9.27□□□□□ -0.93
PTPN7-217ENST00000495688 DNAJC9-AS1A6NH13 148 aa9.27□□□□□ -0.93
PTPN7-217ENST00000495688 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.93
PTPN7-217ENST00000495688 TEX29Q8N6K0 151 aa9.27□□□□□ -0.93
PTPN7-217ENST00000495688 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
PTPN7-217ENST00000495688 ESM1Q9NQ30 184 aa9.27□□□□□ -0.93
PTPN7-217ENST00000495688 TRAV8-4A0A0B4J246 113 aa9.26□□□□□ -0.93
PTPN7-217ENST00000495688 PRIMA1Q86XR5 153 aa9.26□□□□□ -0.93
PTPN7-217ENST00000495688 CDC42SE2Q9NRR3 84 aa9.26□□□□□ -0.93
PTPN7-217ENST00000495688 ANK3Q12955 4377 aaKnown RBP9.26□□□□□ -0.93
PTPN7-217ENST00000495688 GIG44P09565 113 aaPredicted RBP9.25□□□□□ -0.93
PTPN7-217ENST00000495688 WFDC11Q8NEX6 87 aa9.25□□□□□ -0.93
PTPN7-217ENST00000495688 VWFP04275 2813 aa9.25□□□□□ -0.93
PTPN7-217ENST00000495688 F5H768 121 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms