RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 KDM3BQ7LBC6 1761 aa0.52□□□□□ -2.33
COPS3-211ENST00000495640 CELSR2Q9HCU4 2923 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 TMEM262E9PQX1 116 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 H3BQ15 152 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 UNC13BO14795 1591 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 SMIM6P0DI80 62 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 CHD9Q3L8U1 2897 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 SBF2Q86WG5 1849 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 FAM167A-AS1Q96KT0 104 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 LINC01558Q9Y6Z2 57 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 TENM3Q9P273 2699 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
COPS3-211ENST00000495640 TPRP12270 2363 aaKnown RBP0.5□□□□□ -2.33
COPS3-211ENST00000495640 MYO7BQ6PIF6 2116 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 TRAV22A0A0B4J277 110 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 IGLC7A0M8Q6 106 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 F8VRH5 84 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 GNG11P61952 73 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 SMR3AQ99954 134 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 PIEZO1Q92508 2521 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 BTAF1O14981 1849 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 LRRC37A2A6NM11 1700 aa0.5□□□□□ -2.33
COPS3-211ENST00000495640 TOPAZ1Q8N9V7 1692 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 LAMC1P11047 1609 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 HMGXB3Q12766 1538 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 TRAV30A0A087WSZ9 112 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 CTXND1A0A1B0GTU2 59 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 TMEM218A2RU14 115 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 C10orf142B7Z368 130 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 CHKB-CPT1BH3BT56 60 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 UBE2D3P61077 147 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 UBE2D2P62837 147 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 PLCE1Q9P212 2302 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 COL4A6Q14031 1691 aa0.49□□□□□ -2.33
COPS3-211ENST00000495640 ABCC5O15440 1437 aa0.48□□□□□ -2.33
COPS3-211ENST00000495640 UQCR11O14957 56 aa0.48□□□□□ -2.33
COPS3-211ENST00000495640 PIN1P1O15428 100 aa0.48□□□□□ -2.33
COPS3-211ENST00000495640 Q0VG73 95 aa0.48□□□□□ -2.33
COPS3-211ENST00000495640 SSBP3-AS1Q7Z2R9 100 aa0.48□□□□□ -2.33
COPS3-211ENST00000495640 BAGE2Q86Y30 109 aa0.48□□□□□ -2.33
COPS3-211ENST00000495640 UBE2DNLQ8IWF7 75 aa0.48□□□□□ -2.33
COPS3-211ENST00000495640 SMIM4Q8WVI0 70 aa0.48□□□□□ -2.33
COPS3-211ENST00000495640 KDM5AP29375 1690 aaKnown RBP0.48□□□□□ -2.33
COPS3-211ENST00000495640 ZNF609O15014 1411 aa0.47□□□□□ -2.33
COPS3-211ENST00000495640 LOC285095A0A1B0GVY8 99 aa0.47□□□□□ -2.33
COPS3-211ENST00000495640 SNCAP37840 140 aa0.47□□□□□ -2.33
COPS3-211ENST00000495640 C2CD3Q4AC94 2353 aa0.47□□□□□ -2.33
COPS3-211ENST00000495640 SHANK2Q9UPX8 1470 aa0.47□□□□□ -2.33
COPS3-211ENST00000495640 CSMD3Q7Z407 3707 aa0.47□□□□□ -2.33
COPS3-211ENST00000495640 CNTLNQ9NXG0 1405 aa0.47□□□□□ -2.33
COPS3-211ENST00000495640 DIP2CQ9Y2E4 1556 aa0.46□□□□□ -2.34
COPS3-211ENST00000495640 hADV29S1A0JD25 119 aa0.46□□□□□ -2.34
COPS3-211ENST00000495640 NAP1L6A6NFF2 107 aa0.46□□□□□ -2.34
COPS3-211ENST00000495640 ZNF815PA8K554 130 aa0.46□□□□□ -2.34
COPS3-211ENST00000495640 SFT2D2O95562 160 aa0.46□□□□□ -2.34
COPS3-211ENST00000495640 OTOGQ6ZRI0 2925 aa0.46□□□□□ -2.34
COPS3-211ENST00000495640 LRP6O75581 1613 aa0.46□□□□□ -2.34
COPS3-211ENST00000495640 NAV2Q8IVL1 2488 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 EHBP1L1Q8N3D4 1523 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 SPTBN2O15020 2390 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 COX6A2Q02221 97 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 COX17Q14061 63 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 KRTAP21-1Q3LI58 79 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 TMEM170BQ5T4T1 132 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 ACBD7Q8N6N7 88 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 SPRR4Q96PI1 79 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 NPVFQ9HCQ7 196 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 UQCR10Q9UDW1 63 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 MRC2Q9UBG0 1479 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 SCN7AQ01118 1682 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 VPS8Q8N3P4 1428 aa0.45□□□□□ -2.34
COPS3-211ENST00000495640 ZNF292O60281 2723 aa0.44□□□□□ -2.34
COPS3-211ENST00000495640 MPC2O95563 127 aa0.44□□□□□ -2.34
COPS3-211ENST00000495640 IGLC1P0CG04 106 aa0.44□□□□□ -2.34
COPS3-211ENST00000495640 MANBALQ9NQG1 85 aa0.44□□□□□ -2.34
COPS3-211ENST00000495640 RAPGEF6Q8TEU7 1601 aa0.44□□□□□ -2.34
COPS3-211ENST00000495640 IGF2RP11717 2491 aa0.44□□□□□ -2.34
COPS3-211ENST00000495640 TOP2BQ02880 1626 aa0.43□□□□□ -2.34
COPS3-211ENST00000495640 APOC3P02656 99 aa0.43□□□□□ -2.34
COPS3-211ENST00000495640 MT-ATP8P03928 68 aa0.43□□□□□ -2.34
COPS3-211ENST00000495640 S100A10P60903 97 aa0.43□□□□□ -2.34
COPS3-211ENST00000495640 NCMAPQ5T1S8 102 aa0.43□□□□□ -2.34
COPS3-211ENST00000495640 FAM223AQ8IWN6 122 aa0.43□□□□□ -2.34
COPS3-211ENST00000495640 NXT2Q9NPJ8 142 aaKnown RBP0.43□□□□□ -2.34
COPS3-211ENST00000495640 PRO1854Q9UHT4 67 aa0.43□□□□□ -2.34
COPS3-211ENST00000495640 GOLGA4Q13439 2230 aaKnown RBP0.42□□□□□ -2.34
COPS3-211ENST00000495640 NSD3Q9BZ95 1437 aa0.42□□□□□ -2.34
COPS3-211ENST00000495640 HAMPP81172 84 aa0.42□□□□□ -2.34
COPS3-211ENST00000495640 SFTA2Q6UW10 78 aa0.42□□□□□ -2.34
COPS3-211ENST00000495640 ARL2-SNX15V9GYD0 113 aa0.42□□□□□ -2.34
COPS3-211ENST00000495640 ANKRD17O75179 2603 aaKnown RBP0.41□□□□□ -2.34
COPS3-211ENST00000495640 CRYM-AS1A6NIL9 109 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 BCE1O60756 84 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 COX6CP09669 75 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 KRTDAPP60985 99 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 SEC11AP67812 179 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 SPINK6Q6UWN8 80 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 CNFNQ9BYD5 112 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 PRDM15P57071 1507 aaPredicted RBP0.41□□□□□ -2.34
COPS3-211ENST00000495640 ZFYVE26Q68DK2 2539 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms