RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SPAG17Q6Q759 2223 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 BLMP54132 1417 aaPredicted RBP3.44□□□□□ -1.86
SNX13-210ENST00000494402 ARFGEF3Q5TH69 2177 aa3.44□□□□□ -1.86
SNX13-210ENST00000494402 ABCA8O94911 1581 aa3.43□□□□□ -1.86
SNX13-210ENST00000494402 IGKV1-17P01599 117 aa3.43□□□□□ -1.86
SNX13-210ENST00000494402 FXYD4P59646 89 aa3.43□□□□□ -1.86
SNX13-210ENST00000494402 FXYD3Q14802 87 aa3.43□□□□□ -1.86
SNX13-210ENST00000494402 V9GYV3 84 aa3.43□□□□□ -1.86
SNX13-210ENST00000494402 EHBP1L1Q8N3D4 1523 aa3.43□□□□□ -1.86
SNX13-210ENST00000494402 ADGRB2O60241 1585 aa3.42□□□□□ -1.86
SNX13-210ENST00000494402 IGKV2-29A2NJV5 120 aaPredicted RBP3.42□□□□□ -1.86
SNX13-210ENST00000494402 HMGN2P05204 90 aaKnown RBP3.42□□□□□ -1.86
SNX13-210ENST00000494402 ZNF625Q96I27 306 aaPredicted RBP3.42□□□□□ -1.86
SNX13-210ENST00000494402 ARL2-SNX15V9GYD0 113 aa3.42□□□□□ -1.86
SNX13-210ENST00000494402 MYOM1P52179 1685 aa3.42□□□□□ -1.86
SNX13-210ENST00000494402 ESPL1Q14674 2120 aa3.41□□□□□ -1.86
SNX13-210ENST00000494402 RAPGEF6Q8TEU7 1601 aa3.41□□□□□ -1.86
SNX13-210ENST00000494402 KIF21AQ7Z4S6 1674 aa3.41□□□□□ -1.86
SNX13-210ENST00000494402 RREB1Q92766 1687 aa3.41□□□□□ -1.86
SNX13-210ENST00000494402 PCDH15Q96QU1 1955 aa3.41□□□□□ -1.86
SNX13-210ENST00000494402 MED12Q93074 2177 aa3.41□□□□□ -1.86
SNX13-210ENST00000494402 MRC1P22897 1456 aa3.41□□□□□ -1.86
SNX13-210ENST00000494402 MDC1Q14676 2089 aaKnown RBP3.4□□□□□ -1.86
SNX13-210ENST00000494402 HMGXB3Q12766 1538 aa3.4□□□□□ -1.86
SNX13-210ENST00000494402 ABCC2Q92887 1545 aa3.4□□□□□ -1.86
SNX13-210ENST00000494402 PPRC1Q5VV67 1664 aaKnown RBP3.4□□□□□ -1.86
SNX13-210ENST00000494402 UTRNP46939 3433 aa3.4□□□□□ -1.86
SNX13-210ENST00000494402 PCNTO95613 3336 aa3.4□□□□□ -1.86
SNX13-210ENST00000494402 F8WEM9 126 aa3.4□□□□□ -1.87
SNX13-210ENST00000494402 C5orf56Q8N8D9 126 aa3.4□□□□□ -1.87
SNX13-210ENST00000494402 MAGI3Q5TCQ9 1506 aa3.39□□□□□ -1.87
SNX13-210ENST00000494402 FREM1Q5H8C1 2179 aa3.39□□□□□ -1.87
SNX13-210ENST00000494402 DLG5Q8TDM6 1919 aa3.39□□□□□ -1.87
SNX13-210ENST00000494402 CCL18P55774 89 aa3.39□□□□□ -1.87
SNX13-210ENST00000494402 LRRC9Q6ZRR7 1453 aa3.39□□□□□ -1.87
SNX13-210ENST00000494402 FN1P02751 2386 aaKnown RBP3.39□□□□□ -1.87
SNX13-210ENST00000494402 TNRC18O15417 2968 aaPredicted RBP3.39□□□□□ -1.87
SNX13-210ENST00000494402 UBR1Q8IWV7 1749 aa3.39□□□□□ -1.87
SNX13-210ENST00000494402 LTN1O94822 1766 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 TRGV2A0A075B6R0 118 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 C10orf142B7Z368 130 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 F8VRH5 84 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 SMIM13P0DJ93 91 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 GDF5OSQ5U4N7 250 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 PI4KAP42356 2102 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 NEXMIFQ5QGS0 1516 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 STRCP1A6NGW2 1772 aa3.38□□□□□ -1.87
SNX13-210ENST00000494402 DOCK10Q96BY6 2186 aa3.37□□□□□ -1.87
SNX13-210ENST00000494402 SCN11AQ9UI33 1791 aa3.37□□□□□ -1.87
SNX13-210ENST00000494402 NHSL1Q5SYE7 1610 aa3.37□□□□□ -1.87
SNX13-210ENST00000494402 DUOX2Q9NRD8 1548 aa3.36□□□□□ -1.87
SNX13-210ENST00000494402 FAM223BA6NKX1 122 aa3.36□□□□□ -1.87
SNX13-210ENST00000494402 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
SNX13-210ENST00000494402 PSENENQ9NZ42 101 aa3.36□□□□□ -1.87
SNX13-210ENST00000494402 IQGAP3Q86VI3 1631 aa3.36□□□□□ -1.87
SNX13-210ENST00000494402 SPTBP11277 2137 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 ARFGEF1Q9Y6D6 1849 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 ARHGEF5Q12774 1597 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 A0A087WTM6 91 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 IQCF6A8MYZ5 107 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 FXYD1O00168 92 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 HCRTO43612 131 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 ZNF563Q8TA94 476 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 LINC00208Q96KT6 92 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 DOCK11Q5JSL3 2073 aa3.35□□□□□ -1.87
SNX13-210ENST00000494402 COL5A3P25940 1745 aaPredicted RBP3.35□□□□□ -1.87
SNX13-210ENST00000494402 SETXQ7Z333 2677 aaKnown RBP3.35□□□□□ -1.87
SNX13-210ENST00000494402 MROH1Q8NDA8 1641 aa3.34□□□□□ -1.87
SNX13-210ENST00000494402 MYMXA0A1B0GTQ4 84 aa3.34□□□□□ -1.87
SNX13-210ENST00000494402 M0R135 149 aa3.34□□□□□ -1.87
SNX13-210ENST00000494402 ARMS2P0C7Q2 107 aa3.34□□□□□ -1.87
SNX13-210ENST00000494402 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
SNX13-210ENST00000494402 WFDC6Q9BQY6 131 aa3.34□□□□□ -1.87
SNX13-210ENST00000494402 INO80Q9ULG1 1556 aaPredicted RBP3.34□□□□□ -1.88
SNX13-210ENST00000494402 MYO5CQ9NQX4 1742 aa3.33□□□□□ -1.88
SNX13-210ENST00000494402 C7orf77A4D0Y5 90 aa3.33□□□□□ -1.88
SNX13-210ENST00000494402 UQCR11O14957 56 aa3.33□□□□□ -1.88
SNX13-210ENST00000494402 BAGE3Q86Y29 109 aa3.33□□□□□ -1.88
SNX13-210ENST00000494402 BAGE2Q86Y30 109 aa3.33□□□□□ -1.88
SNX13-210ENST00000494402 ABCA4P78363 2273 aa3.33□□□□□ -1.88
SNX13-210ENST00000494402 A0A1B0GWA3 101 aa3.32□□□□□ -1.88
SNX13-210ENST00000494402 UMAD1C9J7I0 102 aa3.32□□□□□ -1.88
SNX13-210ENST00000494402 LEPROTL1O95214 131 aa3.32□□□□□ -1.88
SNX13-210ENST00000494402 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
SNX13-210ENST00000494402 PLGLAQ15195 96 aa3.32□□□□□ -1.88
SNX13-210ENST00000494402 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
SNX13-210ENST00000494402 RGPD8O14715 1765 aaPredicted RBP3.31□□□□□ -1.88
SNX13-210ENST00000494402 RGPD5Q99666 1765 aa3.31□□□□□ -1.88
SNX13-210ENST00000494402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.31□□□□□ -1.88
SNX13-210ENST00000494402 CTXND1A0A1B0GTU2 59 aa3.31□□□□□ -1.88
SNX13-210ENST00000494402 DEFB121Q5J5C9 76 aa3.31□□□□□ -1.88
SNX13-210ENST00000494402 AFDNP55196 1824 aaKnown RBP3.3□□□□□ -1.88
SNX13-210ENST00000494402 HFM1A2PYH4 1435 aa3.3□□□□□ -1.88
SNX13-210ENST00000494402 CEBPZOSA8MTT3 80 aa3.3□□□□□ -1.88
SNX13-210ENST00000494402 CAV3P56539 151 aa3.3□□□□□ -1.88
SNX13-210ENST00000494402 PDCD11Q14690 1871 aaKnown RBP3.3□□□□□ -1.88
SNX13-210ENST00000494402 BTAF1O14981 1849 aa3.3□□□□□ -1.88
SNX13-210ENST00000494402 LOC285556D6RIA3 1793 aa3.3□□□□□ -1.88
SNX13-210ENST00000494402 CUX1P39880 1505 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms