RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 TRBV6-4A0A1B0GX49 114 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 IFITM1P13164 125 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 PSMB2P49721 201 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 MUSTN1Q8IVN3 82 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
NPHP3-209ENST00000493732 ITPR3Q14573 2671 aa6.92□□□□□ -1.3
NPHP3-209ENST00000493732 Q6ZTI0 123 aa6.92□□□□□ -1.3
NPHP3-209ENST00000493732 TMEM101Q96IK0 257 aa6.92□□□□□ -1.3
NPHP3-209ENST00000493732 Q9UF83 564 aa6.92□□□□□ -1.3
NPHP3-209ENST00000493732 EPG5Q9HCE0 2579 aa6.92□□□□□ -1.3
NPHP3-209ENST00000493732 CSMD2Q7Z408 3487 aa6.92□□□□□ -1.3
NPHP3-209ENST00000493732 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
NPHP3-209ENST00000493732 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
NPHP3-209ENST00000493732 NOP10Q9NPE3 64 aaKnown RBP6.91□□□□□ -1.3
NPHP3-209ENST00000493732 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
NPHP3-209ENST00000493732 M0QXV9 152 aa6.91□□□□□ -1.3
NPHP3-209ENST00000493732 NDUFA1O15239 70 aa6.91□□□□□ -1.3
NPHP3-209ENST00000493732 PRSS2P07478 247 aa6.91□□□□□ -1.3
NPHP3-209ENST00000493732 MIAQ16674 131 aa6.91□□□□□ -1.3
NPHP3-209ENST00000493732 C19orf73Q9NVV2 129 aa6.91□□□□□ -1.3
NPHP3-209ENST00000493732 TRAV8-3A0A0A6YYJ7 113 aa6.9□□□□□ -1.3
NPHP3-209ENST00000493732 UBE2L6O14933 153 aa6.9□□□□□ -1.3
NPHP3-209ENST00000493732 RNASE13Q5GAN3 156 aaKnown RBP6.9□□□□□ -1.3
NPHP3-209ENST00000493732 LITAFQ99732 161 aa6.9□□□□□ -1.3
NPHP3-209ENST00000493732 TMEM243Q9BU79 118 aa6.9□□□□□ -1.3
NPHP3-209ENST00000493732 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
NPHP3-209ENST00000493732 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 GIG44P09565 113 aaPredicted RBP6.89□□□□□ -1.31
NPHP3-209ENST00000493732 COX6CP09669 75 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 SPINK8P0C7L1 97 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 HIST2H2BDQ6DRA6 164 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 SBSPONQ8IVN8 264 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 TRBV30A0A0K0K1B3 111 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 GAGE12JA6NER3 117 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 TCL1BO95988 128 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 INSL3P51460 131 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 GAGE4Q13068 117 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 GAGE5Q13069 117 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 Q1RN00 199 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 LINC00242Q5T6M2 205 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 CSNK1G2-AS1Q8NCQ2 148 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
NPHP3-209ENST00000493732 TLN2Q9Y4G6 2542 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 TRGV4A0A0C4DH28 118 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 PF4P02776 101 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 RPL35AP18077 110 aaKnown RBP6.88□□□□□ -1.31
NPHP3-209ENST00000493732 HERV-K104P63124 156 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 ATXN8Q156A1 80 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 HIST2H2BCQ6DN03 193 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 SH2D6Q7Z4S9 175 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 GAGE7O76087 117 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 GAGE12FP0CL80 117 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 GAGE12GP0CL81 117 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 GAGE12IP0CL82 117 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 FOXI1Q12951 378 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
NPHP3-209ENST00000493732 SMIM9A6NGZ8 99 aa6.87□□□□□ -1.31
NPHP3-209ENST00000493732 FLNAP21333 2647 aaKnown RBP6.87□□□□□ -1.31
NPHP3-209ENST00000493732 SFTA2Q6UW10 78 aa6.87□□□□□ -1.31
NPHP3-209ENST00000493732 KIR2DL5BQ8NHK3 375 aa6.87□□□□□ -1.31
NPHP3-209ENST00000493732 PPDPFLQ8WWR9 84 aa6.87□□□□□ -1.31
NPHP3-209ENST00000493732 SIGMAR1Q99720 223 aa6.87□□□□□ -1.31
NPHP3-209ENST00000493732 SONP18583 2426 aaKnown RBP6.87□□□□□ -1.31
NPHP3-209ENST00000493732 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
NPHP3-209ENST00000493732 LINC00694P0DN24 101 aa6.86□□□□□ -1.31
NPHP3-209ENST00000493732 SCGB1A1P11684 91 aa6.86□□□□□ -1.31
NPHP3-209ENST00000493732 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
NPHP3-209ENST00000493732 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
NPHP3-209ENST00000493732 ADAMTSL4-AS1Q5T5F5 129 aa6.86□□□□□ -1.31
NPHP3-209ENST00000493732 CCDC168Q8NDH2 2452 aa6.85□□□□□ -1.31
NPHP3-209ENST00000493732 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
NPHP3-209ENST00000493732 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
NPHP3-209ENST00000493732 LINC00482Q8N8I6 264 aa6.85□□□□□ -1.31
NPHP3-209ENST00000493732 LINC01600Q96MT4 127 aa6.85□□□□□ -1.31
NPHP3-209ENST00000493732 Q9H8V8 135 aa6.85□□□□□ -1.31
NPHP3-209ENST00000493732 H7C2G1 150 aa6.84□□□□□ -1.31
NPHP3-209ENST00000493732 SLC25A20O43772 301 aa6.84□□□□□ -1.31
NPHP3-209ENST00000493732 COX6A2Q02221 97 aa6.84□□□□□ -1.31
NPHP3-209ENST00000493732 MTURNQ8N3F0 131 aa6.84□□□□□ -1.31
NPHP3-209ENST00000493732 WFDC10AQ9H1F0 79 aa6.84□□□□□ -1.31
NPHP3-209ENST00000493732 WNK1Q9H4A3 2382 aa6.84□□□□□ -1.31
NPHP3-209ENST00000493732 CHD6Q8TD26 2715 aa6.84□□□□□ -1.31
NPHP3-209ENST00000493732 TRBV6-8A0A0A6YYG3 113 aa6.84□□□□□ -1.32
NPHP3-209ENST00000493732 A8MZ25 164 aa6.84□□□□□ -1.32
NPHP3-209ENST00000493732 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.32
NPHP3-209ENST00000493732 FHL2Q14192 279 aa6.84□□□□□ -1.32
NPHP3-209ENST00000493732 C9orf66Q5T8R8 295 aa6.84□□□□□ -1.32
NPHP3-209ENST00000493732 PRIMA1Q86XR5 153 aa6.84□□□□□ -1.32
NPHP3-209ENST00000493732 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.84□□□□□ -1.32
NPHP3-209ENST00000493732 ICOSQ9Y6W8 199 aa6.84□□□□□ -1.32
NPHP3-209ENST00000493732 C9JAW5 83 aa6.83□□□□□ -1.32
NPHP3-209ENST00000493732 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
NPHP3-209ENST00000493732 LINC01620Q4KN68 170 aa6.83□□□□□ -1.32
NPHP3-209ENST00000493732 LINC00612Q8N6U2 182 aa6.83□□□□□ -1.32
NPHP3-209ENST00000493732 F5H768 121 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms