RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 USF3Q68DE3 2245 aa-0.12□□□□□ -2.43
ATP13A3-209ENST00000492983 LAMC1P11047 1609 aa-0.13□□□□□ -2.43
ATP13A3-209ENST00000492983 PPRC1Q5VV67 1664 aaKnown RBP-0.13□□□□□ -2.43
ATP13A3-209ENST00000492983 TRBV7-3A0A075B6L6 115 aa-0.13□□□□□ -2.43
ATP13A3-209ENST00000492983 F8VRH5 84 aa-0.13□□□□□ -2.43
ATP13A3-209ENST00000492983 AKAIN1P0CW23 69 aa-0.13□□□□□ -2.43
ATP13A3-209ENST00000492983 FGF7P21781 194 aa-0.13□□□□□ -2.43
ATP13A3-209ENST00000492983 AMELXQ99217 191 aa-0.13□□□□□ -2.43
ATP13A3-209ENST00000492983 DYNLRB1Q9NP97 96 aa-0.13□□□□□ -2.43
ATP13A3-209ENST00000492983 FXYD6-FXYD2A0A087WZ82 144 aa-0.14□□□□□ -2.43
ATP13A3-209ENST00000492983 IFNGP01579 166 aa-0.14□□□□□ -2.43
ATP13A3-209ENST00000492983 Q6JHZ5 121 aa-0.14□□□□□ -2.43
ATP13A3-209ENST00000492983 C1orf54Q8WWF1 131 aa-0.14□□□□□ -2.43
ATP13A3-209ENST00000492983 SPANXDQ9BXN6 97 aa-0.14□□□□□ -2.43
ATP13A3-209ENST00000492983 MYO7BQ6PIF6 2116 aa-0.14□□□□□ -2.43
ATP13A3-209ENST00000492983 ROBO1Q9Y6N7 1651 aa-0.14□□□□□ -2.43
ATP13A3-209ENST00000492983 ROCK2O75116 1388 aaKnown RBP-0.15□□□□□ -2.43
ATP13A3-209ENST00000492983 UQCR11O14957 56 aa-0.15□□□□□ -2.43
ATP13A3-209ENST00000492983 C8orf59Q8N0T1 100 aaPredicted RBP-0.15□□□□□ -2.43
ATP13A3-209ENST00000492983 TP53AIP1Q9HCN2 124 aa-0.15□□□□□ -2.43
ATP13A3-209ENST00000492983 IGLC7A0M8Q6 106 aa-0.16□□□□□ -2.44
ATP13A3-209ENST00000492983 APOC3P02656 99 aa-0.16□□□□□ -2.44
ATP13A3-209ENST00000492983 RIMS1Q86UR5 1692 aaKnown RBP-0.17□□□□□ -2.44
ATP13A3-209ENST00000492983 HMGN4O00479 90 aa-0.17□□□□□ -2.44
ATP13A3-209ENST00000492983 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
ATP13A3-209ENST00000492983 MRPL54Q6P161 138 aaKnown RBP-0.17□□□□□ -2.44
ATP13A3-209ENST00000492983 C5orf38Q86SI9 138 aa-0.17□□□□□ -2.44
ATP13A3-209ENST00000492983 CACNA1AO00555 2505 aa-0.17□□□□□ -2.44
ATP13A3-209ENST00000492983 FLNCQ14315 2725 aa-0.17□□□□□ -2.44
ATP13A3-209ENST00000492983 BTAF1O14981 1849 aa-0.17□□□□□ -2.44
ATP13A3-209ENST00000492983 QRICH2Q9H0J4 1663 aa-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 PTPN13Q12923 2485 aa-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 KTN1Q86UP2 1357 aaKnown RBP-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 SNAPC5O75971 98 aa-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 TPPP2P59282 170 aa-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 DCDP81605 110 aaKnown RBP-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 Q5VSD8 79 aa-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 COMMD6Q7Z4G1 85 aa-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 LINC00472Q9H8W2 130 aa-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 SPTBN1Q01082 2364 aaKnown RBP-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 CUL7Q14999 1698 aa-0.18□□□□□ -2.44
ATP13A3-209ENST00000492983 C10orf71Q711Q0 1435 aa-0.19□□□□□ -2.44
ATP13A3-209ENST00000492983 OOSP1A8MZH6 123 aa-0.19□□□□□ -2.44
ATP13A3-209ENST00000492983 SSSCA1O60232 199 aa-0.19□□□□□ -2.44
ATP13A3-209ENST00000492983 C9orf153Q5TBE3 101 aa-0.19□□□□□ -2.44
ATP13A3-209ENST00000492983 RPL13AP3Q6NVV1 102 aa-0.19□□□□□ -2.44
ATP13A3-209ENST00000492983 MYOZ3Q8TDC0 251 aa-0.19□□□□□ -2.44
ATP13A3-209ENST00000492983 PP6455Q8WZ26 134 aa-0.19□□□□□ -2.44
ATP13A3-209ENST00000492983 LINC00474Q9P2X8 69 aa-0.19□□□□□ -2.44
ATP13A3-209ENST00000492983 NALCNQ8IZF0 1738 aa-0.2□□□□□ -2.44
ATP13A3-209ENST00000492983 SPRR1AP35321 89 aa-0.2□□□□□ -2.44
ATP13A3-209ENST00000492983 LINC01558Q9Y6Z2 57 aa-0.2□□□□□ -2.44
ATP13A3-209ENST00000492983 TENM4Q6N022 2769 aa-0.2□□□□□ -2.44
ATP13A3-209ENST00000492983 I3L2K1 104 aa-0.21□□□□□ -2.44
ATP13A3-209ENST00000492983 SHROOM2Q13796 1616 aa-0.21□□□□□ -2.44
ATP13A3-209ENST00000492983 CSMD3Q7Z407 3707 aa-0.21□□□□□ -2.44
ATP13A3-209ENST00000492983 KDM5AP29375 1690 aaKnown RBP-0.21□□□□□ -2.44
ATP13A3-209ENST00000492983 HMCN2Q8NDA2 5059 aa-0.21□□□□□ -2.44
ATP13A3-209ENST00000492983 A2ML1A8K2U0 1454 aa-0.22□□□□□ -2.44
ATP13A3-209ENST00000492983 PAPPAQ13219 1627 aa-0.22□□□□□ -2.44
ATP13A3-209ENST00000492983 TRBV6-1A0A0K0K1D8 114 aa-0.22□□□□□ -2.44
ATP13A3-209ENST00000492983 LOC285095A0A1B0GVY8 99 aa-0.22□□□□□ -2.44
ATP13A3-209ENST00000492983 CHKB-CPT1BH3BT56 60 aa-0.22□□□□□ -2.44
ATP13A3-209ENST00000492983 SFT2D2O95562 160 aa-0.22□□□□□ -2.44
ATP13A3-209ENST00000492983 TNFP01375 233 aa-0.22□□□□□ -2.44
ATP13A3-209ENST00000492983 BCL9LQ86UU0 1499 aa-0.22□□□□□ -2.45
ATP13A3-209ENST00000492983 MUC12Q9UKN1 5478 aa-0.23□□□□□ -2.45
ATP13A3-209ENST00000492983 PIGYQ3MUY2 71 aa-0.23□□□□□ -2.45
ATP13A3-209ENST00000492983 NSD1Q96L73 2696 aaPredicted RBP-0.23□□□□□ -2.45
ATP13A3-209ENST00000492983 TSC2P49815 1807 aa-0.24□□□□□ -2.45
ATP13A3-209ENST00000492983 A0A1B0GV90 55 aa-0.24□□□□□ -2.45
ATP13A3-209ENST00000492983 MYOM1P52179 1685 aa-0.25□□□□□ -2.45
ATP13A3-209ENST00000492983 GOLGA4Q13439 2230 aaKnown RBP-0.25□□□□□ -2.45
ATP13A3-209ENST00000492983 CHD6Q8TD26 2715 aa-0.25□□□□□ -2.45
ATP13A3-209ENST00000492983 UBE2L5PA0A1B0GUS4 154 aa-0.26□□□□□ -2.45
ATP13A3-209ENST00000492983 UBE2L3P68036 154 aaKnown RBP-0.26□□□□□ -2.45
ATP13A3-209ENST00000492983 UQCR10Q9UDW1 63 aa-0.26□□□□□ -2.45
ATP13A3-209ENST00000492983 VWFP04275 2813 aa-0.27□□□□□ -2.45
ATP13A3-209ENST00000492983 RAPGEF6Q8TEU7 1601 aa-0.27□□□□□ -2.45
ATP13A3-209ENST00000492983 MUC2Q02817 5179 aa-0.27□□□□□ -2.45
ATP13A3-209ENST00000492983 GNG11P61952 73 aa-0.27□□□□□ -2.45
ATP13A3-209ENST00000492983 NXT2Q9NPJ8 142 aaKnown RBP-0.27□□□□□ -2.45
ATP13A3-209ENST00000492983 FAIMQ9NVQ4 179 aa-0.27□□□□□ -2.45
ATP13A3-209ENST00000492983 CSPG4Q6UVK1 2322 aa-0.27□□□□□ -2.45
ATP13A3-209ENST00000492983 ARHGEF5Q12774 1597 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 MYOM2P54296 1465 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 SHANK2Q9UPX8 1470 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 STAB1Q9NY15 2570 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 EFCAB10A6NFE3 127 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 FAM24AA6NFZ4 105 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 DLEU1O43261 78 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 MGPP08493 103 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 TET3O43151 1660 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 GVINP1Q7Z2Y8 2422 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 ARHGEF12Q9NZN5 1544 aa-0.28□□□□□ -2.45
ATP13A3-209ENST00000492983 SRRM2Q9UQ35 2752 aaKnown RBP-0.29□□□□□ -2.46
ATP13A3-209ENST00000492983 DPH3P1Q9H4G8 78 aa-0.29□□□□□ -2.46
ATP13A3-209ENST00000492983 ARL2-SNX15V9GYD0 113 aa-0.29□□□□□ -2.46
ATP13A3-209ENST00000492983 TNXBP22105 4242 aa-0.3□□□□□ -2.46
ATP13A3-209ENST00000492983 PKD1L1Q8TDX9 2849 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms