RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 GAGE6Q13070 117 aa11.09□□□□□ -0.63
TNFRSF1B-203ENST00000492361 CFAP126Q5VTH2 177 aa11.09□□□□□ -0.63
TNFRSF1B-203ENST00000492361 RPL13AP40429 203 aaKnown RBP11.08□□□□□ -0.63
TNFRSF1B-203ENST00000492361 Q6YL49 198 aa11.08□□□□□ -0.63
TNFRSF1B-203ENST00000492361 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
TNFRSF1B-203ENST00000492361 UBE2D1P51668 147 aa11.08□□□□□ -0.64
TNFRSF1B-203ENST00000492361 CITED2Q99967 270 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1B-203ENST00000492361 TEX49A0A1B0GTD5 131 aa11.08□□□□□ -0.64
TNFRSF1B-203ENST00000492361 LOC100131303A0A0U1RQF7 123 aa11.07□□□□□ -0.64
TNFRSF1B-203ENST00000492361 PPDPFLQ8WWR9 84 aa11.07□□□□□ -0.64
TNFRSF1B-203ENST00000492361 CHCHD5Q9BSY4 110 aa11.07□□□□□ -0.64
TNFRSF1B-203ENST00000492361 TRBV20-1A0A075B6N2 111 aa11.07□□□□□ -0.64
TNFRSF1B-203ENST00000492361 RPL36AP83881 106 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 CIRBPQ14011 172 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 RPL36ALQ969Q0 106 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 CCL24O00175 119 aa11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 IGHV3-33P01772 117 aa11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 LINC00694P0DN24 101 aa11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 PFN2P35080 140 aa11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 DEFB113Q30KQ7 82 aa11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 TEN1Q86WV5 123 aa11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 POM121L12Q8N7R1 296 aa11.06□□□□□ -0.64
TNFRSF1B-203ENST00000492361 TRBV7-9A0A0J9YWB2 115 aa11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 DEFB4AO15263 64 aa11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 DEFB114Q30KQ6 69 aa11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 TRIAP1O43715 76 aa11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 EIF4EBP3O60516 100 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 TRBV6-5A0A0K0K1A5 114 aa11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 NXPH4O95158 308 aa11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 PRO0461Q9UI25 63 aa11.05□□□□□ -0.64
TNFRSF1B-203ENST00000492361 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1B-203ENST00000492361 XGP55808 180 aa11.04□□□□□ -0.64
TNFRSF1B-203ENST00000492361 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1B-203ENST00000492361 HTN3P15516 51 aa11.04□□□□□ -0.64
TNFRSF1B-203ENST00000492361 COX6A2Q02221 97 aa11.04□□□□□ -0.64
TNFRSF1B-203ENST00000492361 RS1O15537 224 aa11.03□□□□□ -0.64
TNFRSF1B-203ENST00000492361 ATXN8Q156A1 80 aa11.03□□□□□ -0.64
TNFRSF1B-203ENST00000492361 CARD19Q96LW7 228 aa11.03□□□□□ -0.64
TNFRSF1B-203ENST00000492361 SNCGO76070 127 aa11.03□□□□□ -0.64
TNFRSF1B-203ENST00000492361 IGHV1-58A0A0C4DH39 117 aa11.02□□□□□ -0.64
TNFRSF1B-203ENST00000492361 TTC32Q5I0X7 151 aa11.02□□□□□ -0.64
TNFRSF1B-203ENST00000492361 C5orf38Q86SI9 138 aa11.02□□□□□ -0.64
TNFRSF1B-203ENST00000492361 LINC00158P58513 81 aa11.02□□□□□ -0.65
TNFRSF1B-203ENST00000492361 LINC01620Q4KN68 170 aa11.02□□□□□ -0.65
TNFRSF1B-203ENST00000492361 J3QLI3 93 aa11.02□□□□□ -0.65
TNFRSF1B-203ENST00000492361 KLK9Q2XQG4 91 aa11.02□□□□□ -0.65
TNFRSF1B-203ENST00000492361 PIK3CD-AS1Q5SR53 167 aa11.02□□□□□ -0.65
TNFRSF1B-203ENST00000492361 TEP1Q99973 2627 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1B-203ENST00000492361 CRLF1O75462 422 aa11.01□□□□□ -0.65
TNFRSF1B-203ENST00000492361 ODF3L2Q3SX64 289 aa11.01□□□□□ -0.65
TNFRSF1B-203ENST00000492361 ANAPC13Q9BS18 74 aa11.01□□□□□ -0.65
TNFRSF1B-203ENST00000492361 DNAJC9-AS1A6NH13 148 aa11.01□□□□□ -0.65
TNFRSF1B-203ENST00000492361 C3orf56Q8N813 242 aa11.01□□□□□ -0.65
TNFRSF1B-203ENST00000492361 TRAV8-4A0A0B4J246 113 aa11□□□□□ -0.65
TNFRSF1B-203ENST00000492361 TEX29Q8N6K0 151 aa11□□□□□ -0.65
TNFRSF1B-203ENST00000492361 ICOSQ9Y6W8 199 aa11□□□□□ -0.65
TNFRSF1B-203ENST00000492361 TMEM89A2RUT3 159 aa11□□□□□ -0.65
TNFRSF1B-203ENST00000492361 TMEM101Q96IK0 257 aa11□□□□□ -0.65
TNFRSF1B-203ENST00000492361 UBE2D4Q9Y2X8 147 aa11□□□□□ -0.65
TNFRSF1B-203ENST00000492361 VSIG2Q96IQ7 327 aa11□□□□□ -0.65
TNFRSF1B-203ENST00000492361 FHL3Q13643 280 aa10.99□□□□□ -0.65
TNFRSF1B-203ENST00000492361 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1B-203ENST00000492361 SMR3AQ99954 134 aa10.99□□□□□ -0.65
TNFRSF1B-203ENST00000492361 CHCHD7Q9BUK0 85 aa10.99□□□□□ -0.65
TNFRSF1B-203ENST00000492361 UBE2D3P61077 147 aa10.99□□□□□ -0.65
TNFRSF1B-203ENST00000492361 UBE2D2P62837 147 aa10.99□□□□□ -0.65
TNFRSF1B-203ENST00000492361 PF4P02776 101 aa10.98□□□□□ -0.65
TNFRSF1B-203ENST00000492361 AMELXQ99217 191 aa10.98□□□□□ -0.65
TNFRSF1B-203ENST00000492361 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1B-203ENST00000492361 TRAV26-1A0A087WT03 109 aa10.97□□□□□ -0.65
TNFRSF1B-203ENST00000492361 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
TNFRSF1B-203ENST00000492361 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
TNFRSF1B-203ENST00000492361 ZNF843Q8N446 348 aa10.97□□□□□ -0.65
TNFRSF1B-203ENST00000492361 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
TNFRSF1B-203ENST00000492361 ODF3Q96PU9 254 aa10.97□□□□□ -0.65
TNFRSF1B-203ENST00000492361 C1orf158Q8N1D5 194 aa10.96□□□□□ -0.65
TNFRSF1B-203ENST00000492361 C4orf3Q8WVX3 66 aa10.96□□□□□ -0.65
TNFRSF1B-203ENST00000492361 UBE2WQ96B02 151 aa10.96□□□□□ -0.65
TNFRSF1B-203ENST00000492361 ZFAND6Q6FIF0 208 aa10.96□□□□□ -0.65
TNFRSF1B-203ENST00000492361 Q9HAA7 133 aa10.96□□□□□ -0.65
TNFRSF1B-203ENST00000492361 SPANXA1Q9NS26 97 aa10.96□□□□□ -0.65
TNFRSF1B-203ENST00000492361 RPL32P62910 135 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1B-203ENST00000492361 CDIP1Q9H305 208 aa10.95□□□□□ -0.66
TNFRSF1B-203ENST00000492361 NBPF19A0A087WUL8 3843 aa10.95□□□□□ -0.66
TNFRSF1B-203ENST00000492361 IGLV10-54A0A075B6I4 117 aa10.95□□□□□ -0.66
TNFRSF1B-203ENST00000492361 XCL1P47992 114 aa10.95□□□□□ -0.66
TNFRSF1B-203ENST00000492361 PAX4O43316 350 aa10.95□□□□□ -0.66
TNFRSF1B-203ENST00000492361 C15orf53Q8NAA6 179 aa10.95□□□□□ -0.66
TNFRSF1B-203ENST00000492361 UNC79Q9P2D8 2635 aa10.94□□□□□ -0.66
TNFRSF1B-203ENST00000492361 CRYBA4P53673 196 aa10.94□□□□□ -0.66
TNFRSF1B-203ENST00000492361 MRPS36P82909 103 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1B-203ENST00000492361 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
TNFRSF1B-203ENST00000492361 K7EQD1 137 aa10.93□□□□□ -0.66
TNFRSF1B-203ENST00000492361 MIAQ16674 131 aa10.93□□□□□ -0.66
TNFRSF1B-203ENST00000492361 RNF183Q96D59 192 aa10.93□□□□□ -0.66
TNFRSF1B-203ENST00000492361 SPATA25Q9BR10 227 aa10.93□□□□□ -0.66
TNFRSF1B-203ENST00000492361 TRAV4A0A0B4J268 109 aa10.92□□□□□ -0.66
TNFRSF1B-203ENST00000492361 F8P00451 2351 aa10.92□□□□□ -0.66
TNFRSF1B-203ENST00000492361 TINCRA0A1B0GVN0 87 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms