RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TEP1Q99973 2627 aaKnown RBP8.93□□□□□ -0.98
HMGN1-220ENST00000492280 A0A0U1RRA0 63 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 GAGE7O76087 117 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 GAGE12FP0CL80 117 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 GAGE12GP0CL81 117 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 GAGE12IP0CL82 117 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 SPATA3Q8NHX4 192 aa8.93□□□□□ -0.98
HMGN1-220ENST00000492280 RS1O15537 224 aa8.92□□□□□ -0.98
HMGN1-220ENST00000492280 MUSTN1Q8IVN3 82 aa8.92□□□□□ -0.98
HMGN1-220ENST00000492280 PTH2Q96A98 100 aa8.92□□□□□ -0.98
HMGN1-220ENST00000492280 TMEM238LA0A1B0GVL6 79 aa8.92□□□□□ -0.98
HMGN1-220ENST00000492280 A6NJY4 79 aa8.92□□□□□ -0.98
HMGN1-220ENST00000492280 G3V4G9 280 aa8.92□□□□□ -0.98
HMGN1-220ENST00000492280 TEX29Q8N6K0 151 aa8.92□□□□□ -0.98
HMGN1-220ENST00000492280 CDKN2A-AS1Q9UH64 79 aa8.92□□□□□ -0.98
HMGN1-220ENST00000492280 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
HMGN1-220ENST00000492280 COX6A2Q02221 97 aa8.91□□□□□ -0.98
HMGN1-220ENST00000492280 BEAN1Q3B7T3 259 aa8.91□□□□□ -0.98
HMGN1-220ENST00000492280 ZNF625Q96I27 306 aaPredicted RBP8.91□□□□□ -0.98
HMGN1-220ENST00000492280 PRSS2P07478 247 aa8.91□□□□□ -0.98
HMGN1-220ENST00000492280 ADAMTSL4-AS1Q5T5F5 129 aa8.91□□□□□ -0.98
HMGN1-220ENST00000492280 TRAV13-1A0A0B4J241 112 aa8.9□□□□□ -0.98
HMGN1-220ENST00000492280 KRTAP10-3P60369 221 aa8.9□□□□□ -0.98
HMGN1-220ENST00000492280 MRPS36P82909 103 aaKnown RBP8.9□□□□□ -0.98
HMGN1-220ENST00000492280 DGAT2L7PQ6IED9 249 aa8.9□□□□□ -0.98
HMGN1-220ENST00000492280 RNASE1P07998 156 aaKnown RBP8.9□□□□□ -0.98
HMGN1-220ENST00000492280 NTM-AS1Q6ZSK4 140 aa8.9□□□□□ -0.98
HMGN1-220ENST00000492280 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-220ENST00000492280 PRO0461Q9UI25 63 aa8.9□□□□□ -0.98
HMGN1-220ENST00000492280 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
HMGN1-220ENST00000492280 EDA2RQ9HAV5 297 aa8.89□□□□□ -0.99
HMGN1-220ENST00000492280 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
HMGN1-220ENST00000492280 TCL1BO95988 128 aa8.89□□□□□ -0.99
HMGN1-220ENST00000492280 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-220ENST00000492280 NDUFA12Q9UI09 145 aa8.89□□□□□ -0.99
HMGN1-220ENST00000492280 TRGV2A0A075B6R0 118 aa8.89□□□□□ -0.99
HMGN1-220ENST00000492280 IL17DQ8TAD2 202 aa8.89□□□□□ -0.99
HMGN1-220ENST00000492280 GEMIN7Q9H840 131 aaKnown RBP8.89□□□□□ -0.99
HMGN1-220ENST00000492280 K7EQD1 137 aa8.88□□□□□ -0.99
HMGN1-220ENST00000492280 TMEM263Q8WUH6 116 aaKnown RBP8.88□□□□□ -0.99
HMGN1-220ENST00000492280 C19orf73Q9NVV2 129 aa8.88□□□□□ -0.99
HMGN1-220ENST00000492280 TRAV25A0A0B4J276 109 aa8.88□□□□□ -0.99
HMGN1-220ENST00000492280 PLAC8L1A1L4L8 177 aa8.88□□□□□ -0.99
HMGN1-220ENST00000492280 IGHV1-58A0A0C4DH39 117 aa8.87□□□□□ -0.99
HMGN1-220ENST00000492280 IGLV1-51P01701 117 aa8.87□□□□□ -0.99
HMGN1-220ENST00000492280 SCGB1C2P0DMR2 95 aa8.87□□□□□ -0.99
HMGN1-220ENST00000492280 Q1RN00 199 aa8.87□□□□□ -0.99
HMGN1-220ENST00000492280 LITAFQ99732 161 aa8.87□□□□□ -0.99
HMGN1-220ENST00000492280 SPANXA1Q9NS26 97 aa8.87□□□□□ -0.99
HMGN1-220ENST00000492280 VSIG2Q96IQ7 327 aa8.87□□□□□ -0.99
HMGN1-220ENST00000492280 PRO1854Q9UHT4 67 aa8.87□□□□□ -0.99
HMGN1-220ENST00000492280 F8W1H4 67 aa8.86□□□□□ -0.99
HMGN1-220ENST00000492280 UBE2D3P61077 147 aa8.86□□□□□ -0.99
HMGN1-220ENST00000492280 UBE2D2P62837 147 aa8.86□□□□□ -0.99
HMGN1-220ENST00000492280 HILS1P60008 231 aa8.85□□□□□ -0.99
HMGN1-220ENST00000492280 RPL36AP83881 106 aaKnown RBP8.85□□□□□ -0.99
HMGN1-220ENST00000492280 RPL36ALQ969Q0 106 aaKnown RBP8.85□□□□□ -0.99
HMGN1-220ENST00000492280 TINCRA0A1B0GVN0 87 aa8.85□□□□□ -0.99
HMGN1-220ENST00000492280 TMEM238C9JI98 176 aa8.85□□□□□ -0.99
HMGN1-220ENST00000492280 DEFB130BP0DP73 79 aa8.85□□□□□ -0.99
HMGN1-220ENST00000492280 DEFB130AP0DP74 79 aa8.85□□□□□ -0.99
HMGN1-220ENST00000492280 LINC00242Q5T6M2 205 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 TMEM101Q96IK0 257 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 GTSF1LQ9H1H1 148 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 F8P00451 2351 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 LY6G6DO95868 133 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 IGHV3-33P01772 117 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 PF4P02776 101 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 PIK3CD-AS1Q5SR53 167 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 LINC00482Q8N8I6 264 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 DNAJC30Q96LL9 226 aa8.84□□□□□ -0.99
HMGN1-220ENST00000492280 DEFB4AO15263 64 aa8.83□□□□□ -1
HMGN1-220ENST00000492280 C16orf95Q9H693 158 aa8.83□□□□□ -1
HMGN1-220ENST00000492280 PKD1L1Q8TDX9 2849 aa8.83□□□□□ -1
HMGN1-220ENST00000492280 TRAV4A0A0B4J268 109 aa8.83□□□□□ -1
HMGN1-220ENST00000492280 STAB1Q9NY15 2570 aa8.83□□□□□ -1
HMGN1-220ENST00000492280 A0A096LPF7 62 aa8.82□□□□□ -1
HMGN1-220ENST00000492280 INAFM1C9JVW0 142 aa8.82□□□□□ -1
HMGN1-220ENST00000492280 GAGE6Q13070 117 aa8.82□□□□□ -1
HMGN1-220ENST00000492280 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
HMGN1-220ENST00000492280 TRGV4A0A0C4DH28 118 aa8.82□□□□□ -1
HMGN1-220ENST00000492280 Q9H8V8 135 aa8.82□□□□□ -1
HMGN1-220ENST00000492280 CRLF1O75462 422 aa8.81□□□□□ -1
HMGN1-220ENST00000492280 CLUHP3Q96NS8 147 aa8.81□□□□□ -1
HMGN1-220ENST00000492280 ERG28Q9UKR5 140 aa8.81□□□□□ -1
HMGN1-220ENST00000492280 C16orf74Q96GX8 76 aa8.81□□□□□ -1
HMGN1-220ENST00000492280 BAHCC1Q9P281 2608 aa8.8□□□□□ -1
HMGN1-220ENST00000492280 ZFAND6Q6FIF0 208 aa8.8□□□□□ -1
HMGN1-220ENST00000492280 C9JAW5 83 aa8.8□□□□□ -1
HMGN1-220ENST00000492280 UBE2L6O14933 153 aa8.8□□□□□ -1
HMGN1-220ENST00000492280 TRIAP1O43715 76 aa8.8□□□□□ -1
HMGN1-220ENST00000492280 IGLV4-60A0A075B6I1 120 aa8.79□□□□□ -1
HMGN1-220ENST00000492280 SMAGPQ0VAQ4 97 aa8.79□□□□□ -1
HMGN1-220ENST00000492280 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
HMGN1-220ENST00000492280 DAZ2Q13117 558 aaKnown RBP8.79□□□□□ -1
HMGN1-220ENST00000492280 MIAQ16674 131 aa8.79□□□□□ -1
HMGN1-220ENST00000492280 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
HMGN1-220ENST00000492280 CDC42SE2Q9NRR3 84 aa8.79□□□□□ -1
HMGN1-220ENST00000492280 ANK2Q01484 3957 aa8.79□□□□□ -1
HMGN1-220ENST00000492280 MAST4O15021 2626 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms