RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 K7ERU9 68 aa8.34□□□□□ -1.07
USF1-206ENST00000491629 SCGB1A1P11684 91 aa8.34□□□□□ -1.07
USF1-206ENST00000491629 FHITP49789 147 aa8.34□□□□□ -1.07
USF1-206ENST00000491629 CNBPP62633 177 aaKnown RBP8.34□□□□□ -1.07
USF1-206ENST00000491629 COX8CQ7Z4L0 72 aa8.34□□□□□ -1.07
USF1-206ENST00000491629 TMSB15BA0A087X1C1 80 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 A0A1W2PRE2 83 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 BCL2P10415 239 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 ATP6V0CP27449 155 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 CTRLP40313 264 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 LINC00269Q8N2A0 174 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 SPACA4Q8TDM5 124 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 VPS25Q9BRG1 176 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 CHCHD5Q9BSY4 110 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 TMEM167BQ9NRX6 74 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 LAMTOR2Q9Y2Q5 125 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 PHLDA3Q9Y5J5 127 aa8.33□□□□□ -1.08
USF1-206ENST00000491629 TRAV9-1A0A075B6T8 112 aa8.32□□□□□ -1.08
USF1-206ENST00000491629 TMEM250H0YL14 139 aa8.32□□□□□ -1.08
USF1-206ENST00000491629 CXorf1O96002 111 aa8.32□□□□□ -1.08
USF1-206ENST00000491629 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
USF1-206ENST00000491629 ZNF726P1Q15940 193 aa8.32□□□□□ -1.08
USF1-206ENST00000491629 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
USF1-206ENST00000491629 OCIAD2Q56VL3 154 aa8.32□□□□□ -1.08
USF1-206ENST00000491629 PSMG3Q9BT73 122 aaPredicted RBP8.32□□□□□ -1.08
USF1-206ENST00000491629 IGLV10-54A0A075B6I4 117 aa8.31□□□□□ -1.08
USF1-206ENST00000491629 PEX7O00628 323 aa8.31□□□□□ -1.08
USF1-206ENST00000491629 STPG4Q8N801 248 aa8.31□□□□□ -1.08
USF1-206ENST00000491629 PLAC8Q9NZF1 115 aa8.31□□□□□ -1.08
USF1-206ENST00000491629 KIF25-AS1Q9Y6Z4 181 aa8.31□□□□□ -1.08
USF1-206ENST00000491629 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
USF1-206ENST00000491629 GAGE6Q13070 117 aa8.3□□□□□ -1.08
USF1-206ENST00000491629 FAM162BQ5T6X4 162 aa8.3□□□□□ -1.08
USF1-206ENST00000491629 RNF185Q96GF1 192 aa8.3□□□□□ -1.08
USF1-206ENST00000491629 GFRA4Q9GZZ7 299 aa8.3□□□□□ -1.08
USF1-206ENST00000491629 CST9LQ9H4G1 147 aa8.3□□□□□ -1.08
USF1-206ENST00000491629 MUC21A0A0G2JKD1 596 aa8.29□□□□□ -1.08
USF1-206ENST00000491629 hDV102S1A0JD36 115 aa8.29□□□□□ -1.08
USF1-206ENST00000491629 RNF151Q2KHN1 245 aa8.29□□□□□ -1.08
USF1-206ENST00000491629 OR10AG1Q8NH19 301 aa8.29□□□□□ -1.08
USF1-206ENST00000491629 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
USF1-206ENST00000491629 A0A0J9YXV3 536 aa8.28□□□□□ -1.08
USF1-206ENST00000491629 IGLC3P0DOY3 106 aa8.28□□□□□ -1.08
USF1-206ENST00000491629 PRR3P79522 188 aaKnown RBP8.28□□□□□ -1.08
USF1-206ENST00000491629 SERF2P84101 59 aa8.28□□□□□ -1.08
USF1-206ENST00000491629 REG3AQ06141 175 aa8.28□□□□□ -1.08
USF1-206ENST00000491629 ZNF56Q15929 161 aa8.28□□□□□ -1.08
USF1-206ENST00000491629 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
USF1-206ENST00000491629 DPH3Q96FX2 82 aa8.28□□□□□ -1.08
USF1-206ENST00000491629 TRBV6-1A0A0K0K1D8 114 aa8.27□□□□□ -1.09
USF1-206ENST00000491629 MUC21A0A140T8X8 626 aa8.27□□□□□ -1.09
USF1-206ENST00000491629 RPL23P62829 140 aaKnown RBP8.27□□□□□ -1.09
USF1-206ENST00000491629 BATFQ16520 125 aa8.27□□□□□ -1.09
USF1-206ENST00000491629 DERL1Q9BUN8 251 aa8.27□□□□□ -1.09
USF1-206ENST00000491629 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
USF1-206ENST00000491629 LTAP01374 205 aa8.26□□□□□ -1.09
USF1-206ENST00000491629 WDR73Q6P4I2 378 aa8.26□□□□□ -1.09
USF1-206ENST00000491629 SMIM7Q9BQ49 75 aa8.26□□□□□ -1.09
USF1-206ENST00000491629 TRAPPC1Q9Y5R8 145 aa8.26□□□□□ -1.09
USF1-206ENST00000491629 COX6A2Q02221 97 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 ADIRFQ15847 76 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 COX19Q49B96 90 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 C15orf56Q8N910 161 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 DPH3P1Q9H4G8 78 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 MANBALQ9NQG1 85 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 GNG13Q9P2W3 67 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 PAM16Q9Y3D7 125 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 MUC2Q02817 5179 aa8.25□□□□□ -1.09
USF1-206ENST00000491629 TRBV25-1A0A075B6N4 114 aa8.24□□□□□ -1.09
USF1-206ENST00000491629 CTXND1A0A1B0GTU2 59 aa8.24□□□□□ -1.09
USF1-206ENST00000491629 SNAI2O43623 268 aa8.24□□□□□ -1.09
USF1-206ENST00000491629 PMCHL1Q16048 86 aa8.24□□□□□ -1.09
USF1-206ENST00000491629 SPATA45Q537H7 98 aa8.24□□□□□ -1.09
USF1-206ENST00000491629 Q6ZN92 141 aa8.24□□□□□ -1.09
USF1-206ENST00000491629 C7orf33Q8WU49 177 aa8.24□□□□□ -1.09
USF1-206ENST00000491629 FMC1Q96HJ9 113 aa8.24□□□□□ -1.09
USF1-206ENST00000491629 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
USF1-206ENST00000491629 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.23□□□□□ -1.09
USF1-206ENST00000491629 A0A1B0GV50 99 aa8.23□□□□□ -1.09
USF1-206ENST00000491629 TMEM97Q5BJF2 176 aa8.23□□□□□ -1.09
USF1-206ENST00000491629 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
USF1-206ENST00000491629 TRAV8-4A0A0B4J246 113 aa8.22□□□□□ -1.09
USF1-206ENST00000491629 F5H697 171 aa8.22□□□□□ -1.09
USF1-206ENST00000491629 P01737 135 aa8.22□□□□□ -1.09
USF1-206ENST00000491629 UBE2G1P62253 170 aa8.22□□□□□ -1.09
USF1-206ENST00000491629 MEF2BQ02080 365 aaPredicted RBP8.22□□□□□ -1.09
USF1-206ENST00000491629 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
USF1-206ENST00000491629 AP5S1Q9NUS5 200 aa8.22□□□□□ -1.09
USF1-206ENST00000491629 IGHV1-24A0A0C4DH33 117 aa8.21□□□□□ -1.1
USF1-206ENST00000491629 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
USF1-206ENST00000491629 A0A1B0GUV1 79 aa8.21□□□□□ -1.1
USF1-206ENST00000491629 OR5AL1P0C617 328 aa8.21□□□□□ -1.1
USF1-206ENST00000491629 VAMP3Q15836 100 aa8.21□□□□□ -1.1
USF1-206ENST00000491629 A0A096LNI7 61 aa8.2□□□□□ -1.1
USF1-206ENST00000491629 A0A1B0GV72 72 aa8.2□□□□□ -1.1
USF1-206ENST00000491629 M0QY20 66 aa8.2□□□□□ -1.1
USF1-206ENST00000491629 NUPR1O60356 82 aa8.2□□□□□ -1.1
USF1-206ENST00000491629 SMIM17P0DL12 118 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms