RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 M0R381 172 aa7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 MRPL51Q4U2R6 128 aaKnown RBP7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 DPH3Q96FX2 82 aa7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 LINC01600Q96MT4 127 aa7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 SAMD10Q9BYL1 202 aa7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 JPT2Q9H910 190 aa7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
CLCNKA-206ENST00000491433 TMEM262E9PQX1 116 aa7.12□□□□□ -1.27
CLCNKA-206ENST00000491433 PPBPP02775 128 aa7.12□□□□□ -1.27
CLCNKA-206ENST00000491433 PRSS1P07477 247 aa7.12□□□□□ -1.27
CLCNKA-206ENST00000491433 MIAQ16674 131 aa7.12□□□□□ -1.27
CLCNKA-206ENST00000491433 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
CLCNKA-206ENST00000491433 AP1S3Q96PC3 154 aa7.12□□□□□ -1.27
CLCNKA-206ENST00000491433 TRBV10-1A0A0K0K1A3 114 aa7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 RAB4BP61018 213 aa7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 RAB5BP61020 215 aa7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 RPL36AP83881 106 aaKnown RBP7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 SDIM1Q6ZPB5 146 aa7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 C14orf178Q8N769 122 aaPredicted RBP7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 RPL36ALQ969Q0 106 aaKnown RBP7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 MRAP2Q96G30 205 aa7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 LAMTOR2Q9Y2Q5 125 aa7.11□□□□□ -1.27
CLCNKA-206ENST00000491433 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.1□□□□□ -1.27
CLCNKA-206ENST00000491433 KRTAP9-7A8MTY7 169 aa7.1□□□□□ -1.27
CLCNKA-206ENST00000491433 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
CLCNKA-206ENST00000491433 SSTP61278 116 aa7.1□□□□□ -1.27
CLCNKA-206ENST00000491433 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
CLCNKA-206ENST00000491433 SMIM15Q7Z3B0 74 aa7.1□□□□□ -1.27
CLCNKA-206ENST00000491433 NRACQ8N912 160 aa7.1□□□□□ -1.27
CLCNKA-206ENST00000491433 C18orf32Q8TCD1 76 aa7.1□□□□□ -1.27
CLCNKA-206ENST00000491433 TRBV6-5A0A0K0K1A5 114 aa7.09□□□□□ -1.27
CLCNKA-206ENST00000491433 LINC01546A6NGU7 62 aa7.09□□□□□ -1.27
CLCNKA-206ENST00000491433 C5orf52A6NGY3 159 aa7.09□□□□□ -1.27
CLCNKA-206ENST00000491433 M0QY20 66 aa7.09□□□□□ -1.27
CLCNKA-206ENST00000491433 ESDP10768 282 aa7.09□□□□□ -1.27
CLCNKA-206ENST00000491433 LINC00310P59036 64 aa7.09□□□□□ -1.27
CLCNKA-206ENST00000491433 ORMDL3Q8N138 153 aa7.09□□□□□ -1.27
CLCNKA-206ENST00000491433 URB1-AS1Q96HZ7 61 aa7.09□□□□□ -1.27
CLCNKA-206ENST00000491433 TRBV7-3A0A075B6L6 115 aa7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 IGHV3-64A0A075B6Q5 118 aa7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 D6R8Y8 96 aa7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 RPL32P62910 135 aaKnown RBP7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 FAM74A4Q5TZK3 123 aa7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 AP5S1Q9NUS5 200 aa7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 Q9UF83 564 aa7.08□□□□□ -1.28
CLCNKA-206ENST00000491433 A0A087WWL8 130 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 A0A087WYN8 130 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 TRBV6-8A0A0A6YYG3 113 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 PANO1I0J062 215 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 TNFRSF6BO95407 300 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 NPYP01303 97 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 CKS2P33552 79 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 POLR2KP53803 58 aaKnown RBP7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 UBE2D3P61077 147 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 UBE2D2P62837 147 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 TMEM97Q5BJF2 176 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 SUMO4Q6EEV6 95 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 PRELID3AQ96N28 172 aa7.07□□□□□ -1.28
CLCNKA-206ENST00000491433 SMKR1H3BMG3 65 aa7.06□□□□□ -1.28
CLCNKA-206ENST00000491433 NUPR1O60356 82 aa7.06□□□□□ -1.28
CLCNKA-206ENST00000491433 PPP1R17O96001 155 aa7.06□□□□□ -1.28
CLCNKA-206ENST00000491433 SMIM17P0DL12 118 aa7.06□□□□□ -1.28
CLCNKA-206ENST00000491433 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
CLCNKA-206ENST00000491433 C20orf78Q9BR46 151 aa7.06□□□□□ -1.28
CLCNKA-206ENST00000491433 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
CLCNKA-206ENST00000491433 NDUFA6P56556 154 aa7.05□□□□□ -1.28
CLCNKA-206ENST00000491433 SPACA4Q8TDM5 124 aa7.05□□□□□ -1.28
CLCNKA-206ENST00000491433 CHCHD5Q9BSY4 110 aa7.05□□□□□ -1.28
CLCNKA-206ENST00000491433 NIT2Q9NQR4 276 aa7.05□□□□□ -1.28
CLCNKA-206ENST00000491433 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
CLCNKA-206ENST00000491433 hDV102S1A0JD36 115 aa7.04□□□□□ -1.28
CLCNKA-206ENST00000491433 NCR2O95944 276 aa7.04□□□□□ -1.28
CLCNKA-206ENST00000491433 IQCJQ1A5X6 159 aa7.04□□□□□ -1.28
CLCNKA-206ENST00000491433 RPL39LQ96EH5 51 aaKnown RBP7.04□□□□□ -1.28
CLCNKA-206ENST00000491433 PACRGQ96M98 296 aaPredicted RBP7.04□□□□□ -1.28
CLCNKA-206ENST00000491433 PRR34Q9NV39 138 aa7.04□□□□□ -1.28
CLCNKA-206ENST00000491433 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 H7C1H1 209 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 K7EMI3 77 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 MGPP08493 103 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 LINC00614P0C842 121 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 SUMO2P61956 95 aaKnown RBP7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 SNRPEP62304 92 aaKnown RBP7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 SPINK6Q6UWN8 80 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 HIST3H2BBQ8N257 126 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 Q8N8P6 123 aa7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 TMA7Q9Y2S6 64 aaKnown RBP7.03□□□□□ -1.28
CLCNKA-206ENST00000491433 TRAV8-4A0A0B4J246 113 aa7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 IFITM10A6NMD0 228 aa7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 F5H697 171 aa7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 SERF1AO75920 110 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms