RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	CFC1	P0CG37	223 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	EDN2	P20800	178 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	PROK1	P58294	105 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	UBE2D3	P61077	147 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	UBE2D2	P62837	147 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	RBX1	P62877	108 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	ATXN8	Q156A1	80 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	C9orf66	Q5T8R8	295 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	ZFAND6	Q6FIF0	208 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	ARL17A	Q8IVW1	177 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	C1orf158	Q8N1D5	194 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	LINC01561	Q8N1V8	128 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	TMEM243	Q9BU79	118 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	CHCHD7	Q9BUK0	85 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	NDUFA12	Q9UI09	145 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	AGRN	O00468	2067 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	DCHS2	Q6V1P9	2916 aa		4.58	□□□□□ -1.68
FN1-223	ENST00000490833	USP9Y	O00507	2555 aa	Predicted RBP	4.57	□□□□□ -1.68
FN1-223	ENST00000490833	TRGV4	A0A0C4DH28	118 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833		A0A0J9YXV3	536 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833	RBMY1B	A6NDE4	496 aa	Known RBP	4.57	□□□□□ -1.68
FN1-223	ENST00000490833	RBMY1E	A6NEQ0	496 aa	Known RBP	4.57	□□□□□ -1.68
FN1-223	ENST00000490833	NDUFA1	O15239	70 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833	PRSS2	P07478	247 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833	RBMY1D	P0C7P1	496 aa	Known RBP	4.57	□□□□□ -1.68
FN1-223	ENST00000490833	RBMY1A1	P0DJD3	496 aa	Known RBP	4.57	□□□□□ -1.68
FN1-223	ENST00000490833	RBMY1C	P0DJD4	496 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833	PSMB2	P49721	201 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833	APOC4	P55056	127 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833	RBMY1F	Q15415	496 aa	Known RBP	4.57	□□□□□ -1.68
FN1-223	ENST00000490833	MUC7	Q8TAX7	377 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833	LINC01600	Q96MT4	127 aa		4.57	□□□□□ -1.68
FN1-223	ENST00000490833	CR1	P17927	2039 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	UBR5	O95071	2799 aa	Predicted RBP	4.56	□□□□□ -1.68
FN1-223	ENST00000490833	HECTD1	Q9ULT8	2610 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	LYRM9	A8MSI8	78 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	SPRY2	O43597	315 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	APOM	O95445	188 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	MIA	Q16674	131 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	RNF151	Q2KHN1	245 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	C18orf65	Q6ZTR6	163 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	SIGMAR1	Q99720	223 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	TTTY13	Q9BZ97	58 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	ZNF462	Q96JM2	2506 aa		4.56	□□□□□ -1.68
FN1-223	ENST00000490833	CFAP46	Q8IYW2	2715 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	IGHV3OR16-12	A0A075B7B8	117 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	IGHV3-73	A0A0B4J1V6	119 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	IGLV5-39	A0A0G2JS06	123 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833		A0A1B0GUV1	79 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833		A0A1W2PRX2	142 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833		A4D1N5	150 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	SNCG	O76070	127 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	TSPAN13	O95857	204 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	PCP4	P48539	62 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	KRTAP1-1	Q07627	177 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833		Q1RN00	199 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	MUSTN1	Q8IVN3	82 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	PPDPFL	Q8WWR9	84 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	NOP10	Q9NPE3	64 aa	Known RBP	4.55	□□□□□ -1.68
FN1-223	ENST00000490833	ESM1	Q9NQ30	184 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	CDC42SE2	Q9NRR3	84 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	RELN	P78509	3460 aa		4.55	□□□□□ -1.68
FN1-223	ENST00000490833	TRAV13-2	A0A0B4J235	113 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833		K7ERJ3	54 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	IGHV3-33	P01772	117 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	EMP1	P54849	157 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	MEIG1	Q5JSS6	88 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	TEN1	Q86WV5	123 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	SBSPON	Q8IVN8	264 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	C11orf44	Q8N8P7	122 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	CSNK1G2-AS1	Q8NCQ2	148 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	PRO0255	Q9UI72	69 aa		4.54	□□□□□ -1.68
FN1-223	ENST00000490833	LRRK2	Q5S007	2527 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-223	ENST00000490833	TRBV6-8	A0A0A6YYG3	113 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.53	□□□□□ -1.68
FN1-223	ENST00000490833		H3BT86	120 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	FOXI1	Q12951	378 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	SS18	Q15532	418 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	LINC00242	Q5T6M2	205 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	LINC00612	Q8N6U2	182 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	CARD19	Q96LW7	228 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	SELENOK	Q9Y6D0	94 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	DOPEY2	Q9Y3R5	2298 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	PTPN13	Q12923	2485 aa		4.53	□□□□□ -1.68
FN1-223	ENST00000490833	FLNC	Q14315	2725 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	GAGE12J	A6NER3	117 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	GAGE7	O76087	117 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	ACYP1	P07311	99 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	GAGE12F	P0CL80	117 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	GAGE12G	P0CL81	117 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	GAGE12I	P0CL82	117 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	MIF	P14174	115 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	CXCL5	P42830	114 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	GAGE4	Q13068	117 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	GAGE5	Q13069	117 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833	FAM222A	Q5U5X8	452 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833		Q6ZSN1	163 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833		Q6ZTI0	123 aa		4.52	□□□□□ -1.69
FN1-223	ENST00000490833		Q6ZUT4	128 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms