RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 A0A0J9YWU9 116 aa10.57□□□□□ -0.72
ARHGEF39-205ENST00000490638 COX8AP10176 69 aa10.57□□□□□ -0.72
ARHGEF39-205ENST00000490638 RETNQ9HD89 108 aa10.57□□□□□ -0.72
ARHGEF39-205ENST00000490638 RNASE3P12724 160 aaKnown RBP10.56□□□□□ -0.72
ARHGEF39-205ENST00000490638 HERV-K104P63124 156 aa10.56□□□□□ -0.72
ARHGEF39-205ENST00000490638 COL6A5A8TX70 2615 aa10.56□□□□□ -0.72
ARHGEF39-205ENST00000490638 IGLV2-18A0A075B6J9 118 aa10.56□□□□□ -0.72
ARHGEF39-205ENST00000490638 Q6ZUT4 128 aa10.56□□□□□ -0.72
ARHGEF39-205ENST00000490638 Q8N976 141 aa10.56□□□□□ -0.72
ARHGEF39-205ENST00000490638 NANOS2P60321 138 aaKnown RBP10.56□□□□□ -0.72
ARHGEF39-205ENST00000490638 KRTAP24-1Q3LI83 254 aa10.56□□□□□ -0.72
ARHGEF39-205ENST00000490638 REG3AQ06141 175 aa10.55□□□□□ -0.72
ARHGEF39-205ENST00000490638 NEXN-AS1Q8NBZ9 246 aa10.55□□□□□ -0.72
ARHGEF39-205ENST00000490638 GAGE12HA6NDE8 117 aa10.55□□□□□ -0.72
ARHGEF39-205ENST00000490638 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
ARHGEF39-205ENST00000490638 UNC79Q9P2D8 2635 aa10.55□□□□□ -0.72
ARHGEF39-205ENST00000490638 Q6ZVH6 145 aa10.55□□□□□ -0.72
ARHGEF39-205ENST00000490638 TOMM6Q96B49 74 aa10.55□□□□□ -0.72
ARHGEF39-205ENST00000490638 BAALCQ8WXS3 180 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 M0QY20 66 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 RS1O15537 224 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 TAL2Q16559 108 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 MRGPRG-AS1Q2M3A8 158 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 PCP2Q8IVA1 136 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 Q8N2B8 174 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 OVOL2Q9BRP0 275 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
ARHGEF39-205ENST00000490638 MRPS12O15235 138 aaKnown RBP10.53□□□□□ -0.72
ARHGEF39-205ENST00000490638 TIRAPP58753 221 aa10.53□□□□□ -0.72
ARHGEF39-205ENST00000490638 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
ARHGEF39-205ENST00000490638 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
ARHGEF39-205ENST00000490638 HIGD2BQ4VC39 106 aa10.53□□□□□ -0.72
ARHGEF39-205ENST00000490638 OCIAD2Q56VL3 154 aa10.53□□□□□ -0.72
ARHGEF39-205ENST00000490638 TRAV13-2A0A0B4J235 113 aa10.53□□□□□ -0.72
ARHGEF39-205ENST00000490638 YPEL4Q96NS1 127 aa10.53□□□□□ -0.72
ARHGEF39-205ENST00000490638 C11orf86A6NJI1 115 aa10.52□□□□□ -0.72
ARHGEF39-205ENST00000490638 MAJINQ3KP22 176 aa10.52□□□□□ -0.72
ARHGEF39-205ENST00000490638 LINC00467Q9BRT7 94 aa10.52□□□□□ -0.72
ARHGEF39-205ENST00000490638 SIVA1O15304 175 aa10.52□□□□□ -0.73
ARHGEF39-205ENST00000490638 TNRC18O15417 2968 aaPredicted RBP10.52□□□□□ -0.73
ARHGEF39-205ENST00000490638 LY6G6CO95867 125 aa10.52□□□□□ -0.73
ARHGEF39-205ENST00000490638 TTC32Q5I0X7 151 aa10.52□□□□□ -0.73
ARHGEF39-205ENST00000490638 IGKV2-24A0A0C4DH68 120 aa10.51□□□□□ -0.73
ARHGEF39-205ENST00000490638 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
ARHGEF39-205ENST00000490638 M0R2N4 97 aa10.51□□□□□ -0.73
ARHGEF39-205ENST00000490638 RNASE8Q8TDE3 154 aaKnown RBP10.51□□□□□ -0.73
ARHGEF39-205ENST00000490638 C14orf177Q52M58 125 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 ETDCA0A1B0GVM5 59 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 G3V4G9 280 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 LOC100131303A0A0U1RQF7 123 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 CDK2AP2O75956 126 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 LINC01545Q5VT33 79 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 SND1-IT1Q9HBX3 110 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 C9JAW5 83 aa10.5□□□□□ -0.73
ARHGEF39-205ENST00000490638 CXCL5P42830 114 aa10.49□□□□□ -0.73
ARHGEF39-205ENST00000490638 CHCHD10Q8WYQ3 142 aaPredicted RBP10.49□□□□□ -0.73
ARHGEF39-205ENST00000490638 TRAV12-1A0A0B4J245 112 aa10.49□□□□□ -0.73
ARHGEF39-205ENST00000490638 RBX1P62877 108 aa10.49□□□□□ -0.73
ARHGEF39-205ENST00000490638 CFAP47Q6ZTR5 3102 aa10.49□□□□□ -0.73
ARHGEF39-205ENST00000490638 C1orf158Q8N1D5 194 aa10.48□□□□□ -0.73
ARHGEF39-205ENST00000490638 C9orf85Q96MD7 179 aa10.48□□□□□ -0.73
ARHGEF39-205ENST00000490638 TTTY13Q9BZ97 58 aa10.48□□□□□ -0.73
ARHGEF39-205ENST00000490638 DCHS1Q96JQ0 3298 aa10.48□□□□□ -0.73
ARHGEF39-205ENST00000490638 LAMA5O15230 3695 aa10.48□□□□□ -0.73
ARHGEF39-205ENST00000490638 PRSS47A8MTI9 375 aa10.48□□□□□ -0.73
ARHGEF39-205ENST00000490638 ATMQ13315 3056 aa10.47□□□□□ -0.73
ARHGEF39-205ENST00000490638 DAND5Q8N907 189 aa10.47□□□□□ -0.73
ARHGEF39-205ENST00000490638 CLUHP3Q96NS8 147 aa10.47□□□□□ -0.73
ARHGEF39-205ENST00000490638 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.47□□□□□ -0.73
ARHGEF39-205ENST00000490638 FSHBP01225 129 aa10.47□□□□□ -0.73
ARHGEF39-205ENST00000490638 ODF1Q14990 250 aa10.47□□□□□ -0.73
ARHGEF39-205ENST00000490638 IFITM1P13164 125 aa10.46□□□□□ -0.73
ARHGEF39-205ENST00000490638 ZFHX4Q86UP3 3567 aa10.46□□□□□ -0.73
ARHGEF39-205ENST00000490638 IGHV4-4A0A075B6R2 117 aa10.46□□□□□ -0.74
ARHGEF39-205ENST00000490638 SIGMAR1Q99720 223 aa10.46□□□□□ -0.74
ARHGEF39-205ENST00000490638 GCN1Q92616 2671 aaKnown RBP10.46□□□□□ -0.74
ARHGEF39-205ENST00000490638 Q6ZTC4 211 aa10.45□□□□□ -0.74
ARHGEF39-205ENST00000490638 CDKN2A-AS1Q9UH64 79 aa10.45□□□□□ -0.74
ARHGEF39-205ENST00000490638 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
ARHGEF39-205ENST00000490638 LELP1Q5T871 98 aa10.45□□□□□ -0.74
ARHGEF39-205ENST00000490638 IGHV1-58A0A0C4DH39 117 aa10.45□□□□□ -0.74
ARHGEF39-205ENST00000490638 RNF185Q96GF1 192 aa10.44□□□□□ -0.74
ARHGEF39-205ENST00000490638 LECT2O14960 151 aa10.44□□□□□ -0.74
ARHGEF39-205ENST00000490638 CEND1Q8N111 149 aa10.44□□□□□ -0.74
ARHGEF39-205ENST00000490638 MIR7-3HGQ8N6C7 128 aa10.44□□□□□ -0.74
ARHGEF39-205ENST00000490638 TRBV6-5A0A0K0K1A5 114 aa10.44□□□□□ -0.74
ARHGEF39-205ENST00000490638 SOCS3O14543 225 aa10.43□□□□□ -0.74
ARHGEF39-205ENST00000490638 E9PLD3 99 aa10.43□□□□□ -0.74
ARHGEF39-205ENST00000490638 H7C423 109 aa10.43□□□□□ -0.74
ARHGEF39-205ENST00000490638 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
ARHGEF39-205ENST00000490638 IGLV4-3A0A075B6K6 122 aa10.43□□□□□ -0.74
ARHGEF39-205ENST00000490638 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
ARHGEF39-205ENST00000490638 DMXL2Q8TDJ6 3036 aa10.43□□□□□ -0.74
ARHGEF39-205ENST00000490638 MIAQ16674 131 aa10.42□□□□□ -0.74
ARHGEF39-205ENST00000490638 DMXL1Q9Y485 3027 aa10.42□□□□□ -0.74
ARHGEF39-205ENST00000490638 TRBV20-1A0A075B6N2 111 aa10.42□□□□□ -0.74
ARHGEF39-205ENST00000490638 PIK3CD-AS1Q5SR53 167 aa10.42□□□□□ -0.74
ARHGEF39-205ENST00000490638 U3KQK5 164 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms