RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 FAM104AQ969W3 186 aa9.77□□□□□ -0.85
VPS26A-205ENST00000489656 SCGB1D1O95968 90 aa9.76□□□□□ -0.85
VPS26A-205ENST00000489656 PRSS1P07477 247 aa9.76□□□□□ -0.85
VPS26A-205ENST00000489656 ODF1Q14990 250 aa9.76□□□□□ -0.85
VPS26A-205ENST00000489656 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
VPS26A-205ENST00000489656 AMELXQ99217 191 aa9.76□□□□□ -0.85
VPS26A-205ENST00000489656 FBN3Q75N90 2809 aa9.75□□□□□ -0.85
VPS26A-205ENST00000489656 A0A087WX48 190 aa9.75□□□□□ -0.85
VPS26A-205ENST00000489656 PKIAP61925 76 aa9.75□□□□□ -0.85
VPS26A-205ENST00000489656 PMVKQ15126 192 aa9.75□□□□□ -0.85
VPS26A-205ENST00000489656 CHCHD5Q9BSY4 110 aa9.75□□□□□ -0.85
VPS26A-205ENST00000489656 A0A1B0GUV1 79 aa9.74□□□□□ -0.85
VPS26A-205ENST00000489656 DGAT2L7PQ6IED9 249 aa9.74□□□□□ -0.85
VPS26A-205ENST00000489656 CEMP1Q6PRD7 247 aaPredicted RBP9.74□□□□□ -0.85
VPS26A-205ENST00000489656 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
VPS26A-205ENST00000489656 PRSS29PA6NIE9 313 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 H0Y8G0 127 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 GAGE6Q13070 117 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 AMMECR1LQ6DCA0 310 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 Q6ZUT4 128 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 LINC00518Q8N0U6 118 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 OR5A1Q8NGJ0 315 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 TMEM101Q96IK0 257 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 CDC42SE2Q9NRR3 84 aa9.73□□□□□ -0.85
VPS26A-205ENST00000489656 F8VRH5 84 aa9.72□□□□□ -0.85
VPS26A-205ENST00000489656 TEX43Q6ZNM6 134 aa9.72□□□□□ -0.85
VPS26A-205ENST00000489656 VCX2Q9H322 139 aa9.72□□□□□ -0.85
VPS26A-205ENST00000489656 PLECQ15149 4684 aaKnown RBP9.72□□□□□ -0.85
VPS26A-205ENST00000489656 TRAV8-6A0A0B4J262 113 aa9.71□□□□□ -0.86
VPS26A-205ENST00000489656 NUPR2A6NF83 97 aa9.71□□□□□ -0.86
VPS26A-205ENST00000489656 IGLL5B9A064 214 aa9.71□□□□□ -0.86
VPS26A-205ENST00000489656 ESRGQ1W209 222 aa9.71□□□□□ -0.86
VPS26A-205ENST00000489656 ZNF664Q8N3J9 261 aa9.71□□□□□ -0.86
VPS26A-205ENST00000489656 CHTOPQ9Y3Y2 248 aaKnown RBP9.71□□□□□ -0.86
VPS26A-205ENST00000489656 CSMD3Q7Z407 3707 aa9.71□□□□□ -0.86
VPS26A-205ENST00000489656 DPM2O94777 84 aa9.7□□□□□ -0.86
VPS26A-205ENST00000489656 MPV17L2Q567V2 206 aa9.7□□□□□ -0.86
VPS26A-205ENST00000489656 ZC2HC1BQ5TFG8 222 aa9.7□□□□□ -0.86
VPS26A-205ENST00000489656 CDPF1Q6NVV7 123 aa9.7□□□□□ -0.86
VPS26A-205ENST00000489656 C12orf57Q99622 126 aa9.7□□□□□ -0.86
VPS26A-205ENST00000489656 C2orf88Q9BSF0 95 aa9.7□□□□□ -0.86
VPS26A-205ENST00000489656 MRPL35Q9NZE8 188 aaKnown RBP9.7□□□□□ -0.86
VPS26A-205ENST00000489656 IGLV4-60A0A075B6I1 120 aa9.69□□□□□ -0.86
VPS26A-205ENST00000489656 PLNP26678 52 aa9.69□□□□□ -0.86
VPS26A-205ENST00000489656 TCTAP57738 103 aa9.69□□□□□ -0.86
VPS26A-205ENST00000489656 RBX1P62877 108 aa9.69□□□□□ -0.86
VPS26A-205ENST00000489656 FAM19A3Q7Z5A8 133 aa9.69□□□□□ -0.86
VPS26A-205ENST00000489656 PMCHL2Q9BQD1 86 aa9.69□□□□□ -0.86
VPS26A-205ENST00000489656 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
VPS26A-205ENST00000489656 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
VPS26A-205ENST00000489656 TMEM262E9PQX1 116 aa9.68□□□□□ -0.86
VPS26A-205ENST00000489656 IGKCP01834 107 aa9.68□□□□□ -0.86
VPS26A-205ENST00000489656 NFE4Q86UQ8 179 aa9.68□□□□□ -0.86
VPS26A-205ENST00000489656 APLNQ9ULZ1 77 aa9.68□□□□□ -0.86
VPS26A-205ENST00000489656 KLK5Q9Y337 293 aaPredicted RBP9.68□□□□□ -0.86
VPS26A-205ENST00000489656 MRPS16Q9Y3D3 137 aaKnown RBP9.68□□□□□ -0.86
VPS26A-205ENST00000489656 STARD9Q9P2P6 4700 aa9.67□□□□□ -0.86
VPS26A-205ENST00000489656 IGLC3P0DOY3 106 aa9.67□□□□□ -0.86
VPS26A-205ENST00000489656 UBE2D1P51668 147 aa9.67□□□□□ -0.86
VPS26A-205ENST00000489656 RNASE13Q5GAN3 156 aaKnown RBP9.67□□□□□ -0.86
VPS26A-205ENST00000489656 TRAV9-2A0A087WT02 112 aa9.66□□□□□ -0.86
VPS26A-205ENST00000489656 CCL18P55774 89 aa9.66□□□□□ -0.86
VPS26A-205ENST00000489656 S100A12P80511 92 aa9.66□□□□□ -0.86
VPS26A-205ENST00000489656 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
VPS26A-205ENST00000489656 ATOH7Q8N100 152 aa9.66□□□□□ -0.86
VPS26A-205ENST00000489656 UPK3BQ9BT76 320 aa9.66□□□□□ -0.86
VPS26A-205ENST00000489656 VPS13DQ5THJ4 4388 aa9.66□□□□□ -0.86
VPS26A-205ENST00000489656 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
VPS26A-205ENST00000489656 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
VPS26A-205ENST00000489656 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
VPS26A-205ENST00000489656 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.86
VPS26A-205ENST00000489656 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
VPS26A-205ENST00000489656 CCL25O15444 150 aa9.64□□□□□ -0.87
VPS26A-205ENST00000489656 SEC11AP67812 179 aa9.64□□□□□ -0.87
VPS26A-205ENST00000489656 LINC01556Q5JQF7 62 aa9.64□□□□□ -0.87
VPS26A-205ENST00000489656 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
VPS26A-205ENST00000489656 TGP01266 2768 aa9.63□□□□□ -0.87
VPS26A-205ENST00000489656 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
VPS26A-205ENST00000489656 Q8N3U1 123 aa9.63□□□□□ -0.87
VPS26A-205ENST00000489656 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
VPS26A-205ENST00000489656 HSBP1L1C9JCN9 74 aa9.62□□□□□ -0.87
VPS26A-205ENST00000489656 ANGP03950 147 aaKnown RBP9.62□□□□□ -0.87
VPS26A-205ENST00000489656 HERVK_113P63121 156 aa9.62□□□□□ -0.87
VPS26A-205ENST00000489656 LINC00242Q5T6M2 205 aa9.62□□□□□ -0.87
VPS26A-205ENST00000489656 PRR34Q9NV39 138 aa9.62□□□□□ -0.87
VPS26A-205ENST00000489656 DNAH1Q9P2D7 4330 aa9.62□□□□□ -0.87
VPS26A-205ENST00000489656 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
VPS26A-205ENST00000489656 LINC00959A0A1B0GUT2 108 aa9.61□□□□□ -0.87
VPS26A-205ENST00000489656 hDV102S1A0JD36 115 aa9.61□□□□□ -0.87
VPS26A-205ENST00000489656 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
VPS26A-205ENST00000489656 MAJINQ3KP22 176 aa9.61□□□□□ -0.87
VPS26A-205ENST00000489656 LINC00269Q8N2A0 174 aa9.61□□□□□ -0.87
VPS26A-205ENST00000489656 MUC7Q8TAX7 377 aa9.61□□□□□ -0.87
VPS26A-205ENST00000489656 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
VPS26A-205ENST00000489656 PAM16Q9Y3D7 125 aa9.61□□□□□ -0.87
VPS26A-205ENST00000489656 SIVA1O15304 175 aa9.6□□□□□ -0.87
VPS26A-205ENST00000489656 REG3AQ06141 175 aa9.6□□□□□ -0.87
VPS26A-205ENST00000489656 SPATA45Q537H7 98 aa9.6□□□□□ -0.87
VPS26A-205ENST00000489656 GEMIN7Q9H840 131 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms