RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 AP1S3Q96PC3 154 aa5.37□□□□□ -1.55
SSR1-210ENST00000489567 ANAPC13Q9BS18 74 aa5.37□□□□□ -1.55
SSR1-210ENST00000489567 NBDYA0A0U1RRE5 68 aa5.37□□□□□ -1.55
SSR1-210ENST00000489567 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
SSR1-210ENST00000489567 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
SSR1-210ENST00000489567 FOXA3P55318 350 aaPredicted RBP5.37□□□□□ -1.55
SSR1-210ENST00000489567 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
SSR1-210ENST00000489567 TSKUQ8WUA8 353 aa5.37□□□□□ -1.55
SSR1-210ENST00000489567 PPDPFQ9H3Y8 114 aa5.37□□□□□ -1.55
SSR1-210ENST00000489567 CYSLTR1Q9Y271 337 aa5.37□□□□□ -1.55
SSR1-210ENST00000489567 HIGD1CA8MV81 97 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 F5H697 171 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 MGPP08493 103 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 TWIST1Q15672 202 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 TMEM97Q5BJF2 176 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 Q6ZN92 141 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 NEXN-AS1Q8NBZ9 246 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 OR10G8Q8NGN5 311 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 ATP6V0E2Q8NHE4 81 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 V9GYY9 64 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 FRAS1Q86XX4 4008 aa5.36□□□□□ -1.55
SSR1-210ENST00000489567 RTL8CO15255 209 aa5.35□□□□□ -1.55
SSR1-210ENST00000489567 MRPL54Q6P161 138 aaKnown RBP5.35□□□□□ -1.55
SSR1-210ENST00000489567 SH2D6Q7Z4S9 175 aa5.35□□□□□ -1.55
SSR1-210ENST00000489567 DNAH2Q9P225 4427 aa5.35□□□□□ -1.55
SSR1-210ENST00000489567 TRBV7-3A0A075B6L6 115 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 TRBV10-1A0A0K0K1A3 114 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 M0QY20 66 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 UBE2D3P61077 147 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 UBE2D2P62837 147 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 AMMECR1LQ6DCA0 310 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 SUMO4Q6EEV6 95 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 NUP35Q8NFH5 326 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 GFRA4Q9GZZ7 299 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 FAM231BA6NCW3 169 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 TAX1BP3O14907 124 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 IGLC3P0DOY3 106 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 RPL36AP83881 106 aaKnown RBP5.34□□□□□ -1.55
SSR1-210ENST00000489567 Q8N3U1 123 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 RPL36ALQ969Q0 106 aaKnown RBP5.34□□□□□ -1.55
SSR1-210ENST00000489567 DPH3P1Q9H4G8 78 aa5.34□□□□□ -1.55
SSR1-210ENST00000489567 TRAV26-2A0A0B4J265 109 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 IGHV3-38A0A0C4DH36 116 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 A0A1B0GUT8 65 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 SMIM27A0A1W2PRY6 76 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 A6NDN8 102 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 DNAH10OSP0CZ25 163 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 OR10J3Q5JRS4 329 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 LELP1Q5T871 98 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 C1orf134Q5TEV5 83 aa5.33□□□□□ -1.56
SSR1-210ENST00000489567 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
SSR1-210ENST00000489567 HSBP1O75506 76 aa5.32□□□□□ -1.56
SSR1-210ENST00000489567 GAS8-AS1O95177 125 aa5.32□□□□□ -1.56
SSR1-210ENST00000489567 GATD1Q8NB37 220 aa5.32□□□□□ -1.56
SSR1-210ENST00000489567 PAM16Q9Y3D7 125 aa5.32□□□□□ -1.56
SSR1-210ENST00000489567 DNAH10Q8IVF4 4471 aa5.32□□□□□ -1.56
SSR1-210ENST00000489567 A0A1B0GX51 115 aa5.32□□□□□ -1.56
SSR1-210ENST00000489567 HINT1P49773 126 aaPredicted RBP5.32□□□□□ -1.56
SSR1-210ENST00000489567 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
SSR1-210ENST00000489567 PNRC1Q12796 327 aaPredicted RBP5.32□□□□□ -1.56
SSR1-210ENST00000489567 TTC32Q5I0X7 151 aa5.32□□□□□ -1.56
SSR1-210ENST00000489567 C6orf223Q8N319 242 aa5.32□□□□□ -1.56
SSR1-210ENST00000489567 MRPL18Q9H0U6 180 aaKnown RBP5.32□□□□□ -1.56
SSR1-210ENST00000489567 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 TRAV8-6A0A0B4J262 113 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 KRTAP9-6A0A140TA67 174 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 K7EP34 96 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 IGHV3-30P01768 117 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 IGHV3-33P01772 117 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 IGHV3-30-3P0DP02 117 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 IGHV3-30-5P0DP03 117 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 SPATA45Q537H7 98 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 RASL11AQ6T310 242 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 NTM-AS1Q6ZSK4 140 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 AMN1Q8IY45 258 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 DEFB104AQ8WTQ1 72 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 BORCS7Q96B45 105 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 RPL39LQ96EH5 51 aaKnown RBP5.31□□□□□ -1.56
SSR1-210ENST00000489567 RNF185Q96GF1 192 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 FAM30AQ9NZY2 134 aa5.31□□□□□ -1.56
SSR1-210ENST00000489567 EPPK1P58107 5090 aaKnown RBP5.31□□□□□ -1.56
SSR1-210ENST00000489567 H3BS24 57 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 H7C1H1 209 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 J3KT08 172 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 GCSHP23434 173 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 LINC01556Q5JQF7 62 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 TMEM191AQ9H0A3 160 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 TRBV6-8A0A0A6YYG3 113 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 RIGQ13278 110 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 PMVKQ15126 192 aa5.3□□□□□ -1.56
SSR1-210ENST00000489567 Q6ZRN7 208 aaPredicted RBP5.3□□□□□ -1.56
SSR1-210ENST00000489567 A0A1B0GVY2 172 aa5.29□□□□□ -1.56
SSR1-210ENST00000489567 A0A1B0GXF2 115 aa5.29□□□□□ -1.56
SSR1-210ENST00000489567 LINC00336Q6ZUF6 198 aa5.29□□□□□ -1.56
SSR1-210ENST00000489567 DAZ4Q86SG3 579 aaKnown RBP5.29□□□□□ -1.56
SSR1-210ENST00000489567 DAZ3Q9NR90 486 aaKnown RBP5.29□□□□□ -1.56
SSR1-210ENST00000489567 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
SSR1-210ENST00000489567 SMKR1H3BMG3 65 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms