RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 IGHV3-38A0A0C4DH36 116 aa7.69□□□□□ -1.18
ITSN1-231ENST00000489261 IGKV2-29A2NJV5 120 aaPredicted RBP7.69□□□□□ -1.18
ITSN1-231ENST00000489261 ZNF815PA8K554 130 aa7.69□□□□□ -1.18
ITSN1-231ENST00000489261 TAX1BP3O14907 124 aa7.69□□□□□ -1.18
ITSN1-231ENST00000489261 MIFP14174 115 aa7.69□□□□□ -1.18
ITSN1-231ENST00000489261 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
ITSN1-231ENST00000489261 SBSPONQ8IVN8 264 aa7.69□□□□□ -1.18
ITSN1-231ENST00000489261 CEND1Q8N111 149 aa7.69□□□□□ -1.18
ITSN1-231ENST00000489261 OPRPNQ99935 248 aaPredicted RBP7.69□□□□□ -1.18
ITSN1-231ENST00000489261 MEGF8Q7Z7M0 2845 aa7.69□□□□□ -1.18
ITSN1-231ENST00000489261 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
ITSN1-231ENST00000489261 SMIM13P0DJ93 91 aa7.68□□□□□ -1.18
ITSN1-231ENST00000489261 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
ITSN1-231ENST00000489261 LGALS3P17931 250 aaKnown RBP7.68□□□□□ -1.18
ITSN1-231ENST00000489261 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
ITSN1-231ENST00000489261 TMEM101Q96IK0 257 aa7.68□□□□□ -1.18
ITSN1-231ENST00000489261 TMEM243Q9BU79 118 aa7.68□□□□□ -1.18
ITSN1-231ENST00000489261 A8MZ25 164 aa7.67□□□□□ -1.18
ITSN1-231ENST00000489261 J3QQQ9 107 aa7.67□□□□□ -1.18
ITSN1-231ENST00000489261 UBE2L6O14933 153 aa7.67□□□□□ -1.18
ITSN1-231ENST00000489261 GCSHP23434 173 aa7.67□□□□□ -1.18
ITSN1-231ENST00000489261 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
ITSN1-231ENST00000489261 TTTY13Q9BZ97 58 aa7.67□□□□□ -1.18
ITSN1-231ENST00000489261 TEX48A0A1B0GUV7 120 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 C9orf118A6NHY6 69 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 UBE2D1P51668 147 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 PTTG1IPP53801 180 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 EMP1P54849 157 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 SCGB1D4Q6XE38 83 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 OR5A1Q8NGJ0 315 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 RNF183Q96D59 192 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 GEMIN7Q9H840 131 aaKnown RBP7.66□□□□□ -1.18
ITSN1-231ENST00000489261 SPANXB1Q9NS25 103 aaPredicted RBP7.66□□□□□ -1.18
ITSN1-231ENST00000489261 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
ITSN1-231ENST00000489261 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 TMEM238LA0A1B0GVL6 79 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 A6NJY4 79 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 DEFB130BP0DP73 79 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 DEFB130AP0DP74 79 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 HERVK_113P63121 156 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 SAMD5Q5TGI4 173 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 AMMECR1LQ6DCA0 310 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 CEMP1Q6PRD7 247 aaPredicted RBP7.65□□□□□ -1.18
ITSN1-231ENST00000489261 Q6ZUT4 128 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 CDC42SE2Q9NRR3 84 aa7.65□□□□□ -1.18
ITSN1-231ENST00000489261 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
ITSN1-231ENST00000489261 SPART-AS1P0CW21 52 aa7.64□□□□□ -1.19
ITSN1-231ENST00000489261 IGHV4-30-4P0DP06 118 aa7.64□□□□□ -1.19
ITSN1-231ENST00000489261 EGFEM1PQ0D2K5 195 aa7.64□□□□□ -1.19
ITSN1-231ENST00000489261 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
ITSN1-231ENST00000489261 UBE2V1Q13404 147 aa7.64□□□□□ -1.19
ITSN1-231ENST00000489261 KPRPQ5T749 579 aaPredicted RBP7.64□□□□□ -1.19
ITSN1-231ENST00000489261 FAM222AQ5U5X8 452 aa7.64□□□□□ -1.19
ITSN1-231ENST00000489261 LINC00469Q8N7U9 141 aa7.64□□□□□ -1.19
ITSN1-231ENST00000489261 A0A0J9YY99 117 aa7.63□□□□□ -1.19
ITSN1-231ENST00000489261 G3V4G9 280 aa7.63□□□□□ -1.19
ITSN1-231ENST00000489261 VAMP3Q15836 100 aa7.63□□□□□ -1.19
ITSN1-231ENST00000489261 DEFB135Q30KP9 77 aa7.63□□□□□ -1.19
ITSN1-231ENST00000489261 SH2D6Q7Z4S9 175 aa7.63□□□□□ -1.19
ITSN1-231ENST00000489261 ATP6V0E2Q8NHE4 81 aa7.63□□□□□ -1.19
ITSN1-231ENST00000489261 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
ITSN1-231ENST00000489261 IGHV4-28A0A0C4DH34 117 aa7.62□□□□□ -1.19
ITSN1-231ENST00000489261 PAX4O43316 350 aa7.62□□□□□ -1.19
ITSN1-231ENST00000489261 IGHV3-30-3P0DP02 117 aa7.62□□□□□ -1.19
ITSN1-231ENST00000489261 GYPEP15421 78 aa7.62□□□□□ -1.19
ITSN1-231ENST00000489261 FXYD2P54710 66 aa7.62□□□□□ -1.19
ITSN1-231ENST00000489261 DAD1P61803 113 aa7.62□□□□□ -1.19
ITSN1-231ENST00000489261 Q8NAQ8 132 aa7.62□□□□□ -1.19
ITSN1-231ENST00000489261 VSIG2Q96IQ7 327 aa7.62□□□□□ -1.19
ITSN1-231ENST00000489261 TRAV26-1A0A087WT03 109 aa7.61□□□□□ -1.19
ITSN1-231ENST00000489261 LOC100131303A0A0U1RQF7 123 aa7.61□□□□□ -1.19
ITSN1-231ENST00000489261 A0A1B0GWB2 263 aa7.61□□□□□ -1.19
ITSN1-231ENST00000489261 ATP5G1P05496 136 aa7.61□□□□□ -1.19
ITSN1-231ENST00000489261 C12orf74Q32Q52 190 aa7.61□□□□□ -1.19
ITSN1-231ENST00000489261 Q6ZVH6 145 aa7.61□□□□□ -1.19
ITSN1-231ENST00000489261 GTF2H5Q6ZYL4 71 aa7.61□□□□□ -1.19
ITSN1-231ENST00000489261 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
ITSN1-231ENST00000489261 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
ITSN1-231ENST00000489261 CCL25O15444 150 aa7.6□□□□□ -1.19
ITSN1-231ENST00000489261 TSPEAR-AS2P59090 65 aa7.6□□□□□ -1.19
ITSN1-231ENST00000489261 RNASE13Q5GAN3 156 aaKnown RBP7.6□□□□□ -1.19
ITSN1-231ENST00000489261 LINC00242Q5T6M2 205 aa7.6□□□□□ -1.19
ITSN1-231ENST00000489261 TIMM17BO60830 172 aa7.59□□□□□ -1.19
ITSN1-231ENST00000489261 OXLD1Q5BKU9 147 aa7.59□□□□□ -1.19
ITSN1-231ENST00000489261 ZFAND6Q6FIF0 208 aa7.59□□□□□ -1.19
ITSN1-231ENST00000489261 CHCHD5Q9BSY4 110 aa7.59□□□□□ -1.19
ITSN1-231ENST00000489261 NHP2Q9NX24 153 aaKnown RBP7.59□□□□□ -1.19
ITSN1-231ENST00000489261 NOTCH3Q9UM47 2321 aa7.59□□□□□ -1.19
ITSN1-231ENST00000489261 PRKDCP78527 4128 aaKnown RBP7.59□□□□□ -1.19
ITSN1-231ENST00000489261 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
ITSN1-231ENST00000489261 IGHV3-30P01768 117 aa7.58□□□□□ -1.2
ITSN1-231ENST00000489261 IGHV3-30-5P0DP03 117 aa7.58□□□□□ -1.2
ITSN1-231ENST00000489261 FABP2P12104 132 aa7.58□□□□□ -1.2
ITSN1-231ENST00000489261 CDKN2A-AS1Q9UH64 79 aa7.58□□□□□ -1.2
ITSN1-231ENST00000489261 NDUFA12Q9UI09 145 aa7.58□□□□□ -1.2
ITSN1-231ENST00000489261 TRAV13-1A0A0B4J241 112 aa7.57□□□□□ -1.2
ITSN1-231ENST00000489261 A0A0J9YXY3 114 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms