RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 CSMD1Q96PZ7 3565 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 A0A1B0GWB2 263 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 A0A1W2PPM0 123 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 PLAC8L1A1L4L8 177 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 LYRM9A8MSI8 78 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 UBE2L6O14933 153 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 FXYD2P54710 66 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 AMMECR1LQ6DCA0 310 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 SLC25A29Q8N8R3 303 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 WFDC9Q8NEX5 89 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 TMEM101Q96IK0 257 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 TMEM243Q9BU79 118 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 NHP2Q9NX24 153 aaKnown RBP4.73□□□□□ -1.65
HDLBP-243ENST00000488923 HIVEP2P31629 2446 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 UNC79Q9P2D8 2635 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 CHD6Q8TD26 2715 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 ZANQ9Y493 2812 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 VPS13CQ709C8 3753 aa4.73□□□□□ -1.65
HDLBP-243ENST00000488923 FLNAP21333 2647 aaKnown RBP4.72□□□□□ -1.65
HDLBP-243ENST00000488923 MXRA5Q9NR99 2828 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 IGHV1-58A0A0C4DH39 117 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 A0A0J9YXV3 536 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 A0A0J9YY99 117 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE12JA6NER3 117 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 H3BUT2 72 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 K7EP34 96 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 PRM2P04554 102 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 UBE2D1P51668 147 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 EMP1P54849 157 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE4Q13068 117 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE5Q13069 117 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 C12orf74Q32Q52 190 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE13Q4V321 117 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 LINC00612Q8N6U2 182 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
HDLBP-243ENST00000488923 COPS9Q8WXC6 57 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 WFDC10AQ9H1F0 79 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 X6R8D5 127 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 CCDC168Q8NDH2 2452 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 TENM4Q6N022 2769 aa4.72□□□□□ -1.65
HDLBP-243ENST00000488923 SVEP1Q4LDE5 3571 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 MYO9AB2RTY4 2548 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.71□□□□□ -1.66
HDLBP-243ENST00000488923 IGLV5-45A0A087WSX0 123 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.71□□□□□ -1.66
HDLBP-243ENST00000488923 TEX48A0A1B0GUV7 120 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 IGKV2-29A2NJV5 120 aaPredicted RBP4.71□□□□□ -1.66
HDLBP-243ENST00000488923 K7EP13 123 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 CCL25O15444 150 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 TIMM17BO60830 172 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 RPL24P83731 157 aaKnown RBP4.71□□□□□ -1.66
HDLBP-243ENST00000488923 Q6ZUT4 128 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 SBSPONQ8IVN8 264 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 OPRPNQ99935 248 aaPredicted RBP4.71□□□□□ -1.66
HDLBP-243ENST00000488923 SPCS1Q9Y6A9 102 aa4.71□□□□□ -1.66
HDLBP-243ENST00000488923 CSMD2Q7Z408 3487 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 IGHV3-38A0A0C4DH36 116 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 A0A0J9YXY3 114 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 IGHV3-30-3P0DP02 117 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 MIFP14174 115 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 CIRBPQ14011 172 aaKnown RBP4.7□□□□□ -1.66
HDLBP-243ENST00000488923 FHL2Q14192 279 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.7□□□□□ -1.66
HDLBP-243ENST00000488923 DEFB104AQ8WTQ1 72 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 RNF183Q96D59 192 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 VSIG2Q96IQ7 327 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 C1orf43Q9BWL3 253 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 PRO0255Q9UI72 69 aa4.7□□□□□ -1.66
HDLBP-243ENST00000488923 AGRNO00468 2067 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 MAP1AP78559 2803 aaPredicted RBP4.69□□□□□ -1.66
HDLBP-243ENST00000488923 TRBV6-8A0A0A6YYG3 113 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 IGLL5B9A064 214 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 IGHV3-30P01768 117 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 LINC00694P0DN24 101 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 IGHV3-30-5P0DP03 117 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 IFITM1P13164 125 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 MALP21145 153 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 RBX1P62877 108 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 HERV-K104P63124 156 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 ZFAND6Q6FIF0 208 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 NTM-AS1Q6ZSK4 140 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 SH2D6Q7Z4S9 175 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 FAM104AQ969W3 186 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 SPANXDQ9BXN6 97 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 PPDPFQ9H3Y8 114 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 CDC42SE2Q9NRR3 84 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 SPANXCQ9NY87 97 aa4.69□□□□□ -1.66
HDLBP-243ENST00000488923 HELZ2Q9BYK8 2649 aaKnown RBP4.69□□□□□ -1.66
HDLBP-243ENST00000488923 SONP18583 2426 aaKnown RBP4.68□□□□□ -1.66
HDLBP-243ENST00000488923 ANK3Q12955 4377 aaKnown RBP4.68□□□□□ -1.66
HDLBP-243ENST00000488923 TRAV26-1A0A087WT03 109 aa4.68□□□□□ -1.66
HDLBP-243ENST00000488923 A0A0B4J2C4 111 aa4.68□□□□□ -1.66
HDLBP-243ENST00000488923 IGLV5-39A0A0G2JS06 123 aa4.68□□□□□ -1.66
HDLBP-243ENST00000488923 TSPEAR-AS2P59090 65 aa4.68□□□□□ -1.66
HDLBP-243ENST00000488923 CEMP1Q6PRD7 247 aaPredicted RBP4.68□□□□□ -1.66
HDLBP-243ENST00000488923 Q9UF83 564 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms