RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CARD19Q96LW7 228 aa9.13□□□□□ -0.95
CLIC4-202ENST00000488683 SIGMAR1Q99720 223 aa9.13□□□□□ -0.95
CLIC4-202ENST00000488683 CITED2Q99967 270 aaPredicted RBP9.13□□□□□ -0.95
CLIC4-202ENST00000488683 LRRC75A-AS1Q8N1F1 130 aa9.13□□□□□ -0.95
CLIC4-202ENST00000488683 CDKN2A-AS1Q9UH64 79 aa9.13□□□□□ -0.95
CLIC4-202ENST00000488683 TENM1Q9UKZ4 2725 aa9.12□□□□□ -0.95
CLIC4-202ENST00000488683 TRRAPQ9Y4A5 3859 aa9.12□□□□□ -0.95
CLIC4-202ENST00000488683 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
CLIC4-202ENST00000488683 INSP01308 110 aa9.12□□□□□ -0.95
CLIC4-202ENST00000488683 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
CLIC4-202ENST00000488683 FOXI1Q12951 378 aa9.11□□□□□ -0.95
CLIC4-202ENST00000488683 STHQ8IWL8 128 aa9.11□□□□□ -0.95
CLIC4-202ENST00000488683 TMEM263Q8WUH6 116 aaKnown RBP9.11□□□□□ -0.95
CLIC4-202ENST00000488683 LITAFQ99732 161 aa9.11□□□□□ -0.95
CLIC4-202ENST00000488683 IGKV3OR2-268A0A0C4DH90 116 aa9.11□□□□□ -0.95
CLIC4-202ENST00000488683 C9JAW5 83 aa9.11□□□□□ -0.95
CLIC4-202ENST00000488683 IGHV3-33P01772 117 aa9.11□□□□□ -0.95
CLIC4-202ENST00000488683 BEAN1Q3B7T3 259 aa9.11□□□□□ -0.95
CLIC4-202ENST00000488683 NDUFA12Q9UI09 145 aa9.11□□□□□ -0.95
CLIC4-202ENST00000488683 OTOGQ6ZRI0 2925 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 GAGE12JA6NER3 117 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 GAGE4Q13068 117 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 GAGE5Q13069 117 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 PIK3CD-AS1Q5SR53 167 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 NOP10Q9NPE3 64 aaKnown RBP9.1□□□□□ -0.95
CLIC4-202ENST00000488683 RS1O15537 224 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 ANKRD29Q8N6D5 301 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
CLIC4-202ENST00000488683 UNC79Q9P2D8 2635 aa9.09□□□□□ -0.95
CLIC4-202ENST00000488683 CCL24O00175 119 aa9.09□□□□□ -0.95
CLIC4-202ENST00000488683 SMR3AQ99954 134 aa9.09□□□□□ -0.95
CLIC4-202ENST00000488683 HIVEP2P31629 2446 aa9.09□□□□□ -0.95
CLIC4-202ENST00000488683 IGHV1-58A0A0C4DH39 117 aa9.09□□□□□ -0.95
CLIC4-202ENST00000488683 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
CLIC4-202ENST00000488683 NTM-AS1Q6ZSK4 140 aa9.08□□□□□ -0.96
CLIC4-202ENST00000488683 GEMIN7Q9H840 131 aaKnown RBP9.08□□□□□ -0.96
CLIC4-202ENST00000488683 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
CLIC4-202ENST00000488683 ERG28Q9UKR5 140 aa9.08□□□□□ -0.96
CLIC4-202ENST00000488683 J3QR89 54 aa9.08□□□□□ -0.96
CLIC4-202ENST00000488683 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
CLIC4-202ENST00000488683 TINCRA0A1B0GVN0 87 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 TRIAP1O43715 76 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 MT-ATP8P03928 68 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 CRYBA4P53673 196 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 CLEC2BQ92478 149 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 GAGE7O76087 117 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 GAGE12FP0CL80 117 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 GAGE12GP0CL81 117 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 GAGE12IP0CL82 117 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
CLIC4-202ENST00000488683 TMEM86BQ8N661 226 aa9.06□□□□□ -0.96
CLIC4-202ENST00000488683 IL17DQ8TAD2 202 aa9.06□□□□□ -0.96
CLIC4-202ENST00000488683 TMEM101Q96IK0 257 aa9.06□□□□□ -0.96
CLIC4-202ENST00000488683 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
CLIC4-202ENST00000488683 DNAJC30Q96LL9 226 aa9.06□□□□□ -0.96
CLIC4-202ENST00000488683 LYRM7Q5U5X0 104 aa9.05□□□□□ -0.96
CLIC4-202ENST00000488683 TRBV20-1A0A075B6N2 111 aa9.04□□□□□ -0.96
CLIC4-202ENST00000488683 SLC25A20O43772 301 aa9.04□□□□□ -0.96
CLIC4-202ENST00000488683 GIG44P09565 113 aaPredicted RBP9.04□□□□□ -0.96
CLIC4-202ENST00000488683 XGP55808 180 aa9.04□□□□□ -0.96
CLIC4-202ENST00000488683 YAE1D1Q9NRH1 226 aa9.04□□□□□ -0.96
CLIC4-202ENST00000488683 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
CLIC4-202ENST00000488683 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
CLIC4-202ENST00000488683 CLUHP3Q96NS8 147 aa9.04□□□□□ -0.96
CLIC4-202ENST00000488683 LINC00242Q5T6M2 205 aa9.03□□□□□ -0.96
CLIC4-202ENST00000488683 Q9H8V8 135 aa9.03□□□□□ -0.96
CLIC4-202ENST00000488683 TEX49A0A1B0GTD5 131 aa9.03□□□□□ -0.96
CLIC4-202ENST00000488683 LINC01006Q8NI28 216 aa9.03□□□□□ -0.96
CLIC4-202ENST00000488683 NTN5Q8WTR8 489 aaPredicted RBP9.03□□□□□ -0.96
CLIC4-202ENST00000488683 TRAV25A0A0B4J276 109 aa9.03□□□□□ -0.96
CLIC4-202ENST00000488683 KRTAP1-1Q07627 177 aa9.03□□□□□ -0.96
CLIC4-202ENST00000488683 ZFAND6Q6FIF0 208 aa9.03□□□□□ -0.96
CLIC4-202ENST00000488683 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
CLIC4-202ENST00000488683 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.02□□□□□ -0.97
CLIC4-202ENST00000488683 SPATA3Q8NHX4 192 aa9.02□□□□□ -0.97
CLIC4-202ENST00000488683 TRGV2A0A075B6R0 118 aa9.01□□□□□ -0.97
CLIC4-202ENST00000488683 IGLV5-45A0A087WSX0 123 aa9.01□□□□□ -0.97
CLIC4-202ENST00000488683 MIAQ16674 131 aa9.01□□□□□ -0.97
CLIC4-202ENST00000488683 SPANXDQ9BXN6 97 aa9.01□□□□□ -0.97
CLIC4-202ENST00000488683 SPANXCQ9NY87 97 aa9.01□□□□□ -0.97
CLIC4-202ENST00000488683 CIDEAO60543 219 aa9.01□□□□□ -0.97
CLIC4-202ENST00000488683 K7EQD1 137 aa9□□□□□ -0.97
CLIC4-202ENST00000488683 RPL13AP40429 203 aaKnown RBP9□□□□□ -0.97
CLIC4-202ENST00000488683 ICOSQ9Y6W8 199 aa9□□□□□ -0.97
CLIC4-202ENST00000488683 A0A096LPF7 62 aa9□□□□□ -0.97
CLIC4-202ENST00000488683 PLAC8L1A1L4L8 177 aa9□□□□□ -0.97
CLIC4-202ENST00000488683 SOSTDC1Q6X4U4 206 aa9□□□□□ -0.97
CLIC4-202ENST00000488683 PPDPFLQ8WWR9 84 aa9□□□□□ -0.97
CLIC4-202ENST00000488683 TIRAPP58753 221 aa8.99□□□□□ -0.97
CLIC4-202ENST00000488683 GAGE6Q13070 117 aa8.99□□□□□ -0.97
CLIC4-202ENST00000488683 LINC01620Q4KN68 170 aa8.99□□□□□ -0.97
CLIC4-202ENST00000488683 ATRQ13535 2644 aa8.99□□□□□ -0.97
CLIC4-202ENST00000488683 CKS1BP61024 79 aa8.99□□□□□ -0.97
CLIC4-202ENST00000488683 DEFB130BP0DP73 79 aa8.98□□□□□ -0.97
CLIC4-202ENST00000488683 DEFB130AP0DP74 79 aa8.98□□□□□ -0.97
CLIC4-202ENST00000488683 RPL36AP83881 106 aaKnown RBP8.98□□□□□ -0.97
CLIC4-202ENST00000488683 RPL36ALQ969Q0 106 aaKnown RBP8.98□□□□□ -0.97
CLIC4-202ENST00000488683 C11orf68Q9H3H3 251 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms