RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 A0A096LNJ9 63 aa7.28□□□□□ -1.24
HLA-DMB-261ENST00000487996 IGKV2-29A2NJV5 120 aaPredicted RBP7.28□□□□□ -1.24
HLA-DMB-261ENST00000487996 HSBP1L1C9JCN9 74 aa7.28□□□□□ -1.24
HLA-DMB-261ENST00000487996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.28□□□□□ -1.24
HLA-DMB-261ENST00000487996 MRPL52Q86TS9 123 aaKnown RBP7.28□□□□□ -1.24
HLA-DMB-261ENST00000487996 TMEM141Q96I45 108 aa7.28□□□□□ -1.24
HLA-DMB-261ENST00000487996 APLNQ9ULZ1 77 aa7.28□□□□□ -1.24
HLA-DMB-261ENST00000487996 CSDC2Q9Y534 153 aaKnown RBP7.28□□□□□ -1.24
HLA-DMB-261ENST00000487996 FGF6P10767 208 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 FABP4P15090 132 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 RPL39P62891 51 aaKnown RBP7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 ESRGQ1W209 222 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 Q6ZN92 141 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 HIST1H2BLQ99880 126 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 A0A087WX48 190 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 A0A1B0GUV1 79 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 TMEM262E9PQX1 116 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 C3orf84H3BNL1 204 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 LBHQ53QV2 105 aaPredicted RBP7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 OR5A1Q8NGJ0 315 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 IFI27L1Q96BM0 104 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 MAP1LC3CQ9BXW4 147 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 UBE2D4Q9Y2X8 147 aa7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 MRPS16Q9Y3D3 137 aaKnown RBP7.27□□□□□ -1.25
HLA-DMB-261ENST00000487996 IGIPA6NJ69 53 aa7.26□□□□□ -1.25
HLA-DMB-261ENST00000487996 GAGE6Q13070 117 aa7.26□□□□□ -1.25
HLA-DMB-261ENST00000487996 ZFAND6Q6FIF0 208 aa7.26□□□□□ -1.25
HLA-DMB-261ENST00000487996 DNAH7Q8WXX0 4024 aa7.26□□□□□ -1.25
HLA-DMB-261ENST00000487996 MRPS36P82909 103 aaKnown RBP7.25□□□□□ -1.25
HLA-DMB-261ENST00000487996 UBE2DNLQ8IWF7 75 aa7.25□□□□□ -1.25
HLA-DMB-261ENST00000487996 UPK3BQ9BT76 320 aa7.25□□□□□ -1.25
HLA-DMB-261ENST00000487996 LINC00588Q9Y4M8 146 aa7.24□□□□□ -1.25
HLA-DMB-261ENST00000487996 PRSS1P07477 247 aa7.24□□□□□ -1.25
HLA-DMB-261ENST00000487996 TEX43Q6ZNM6 134 aa7.24□□□□□ -1.25
HLA-DMB-261ENST00000487996 C2orf88Q9BSF0 95 aa7.24□□□□□ -1.25
HLA-DMB-261ENST00000487996 VCX2Q9H322 139 aa7.24□□□□□ -1.25
HLA-DMB-261ENST00000487996 IGLV4-3A0A075B6K6 122 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 A0A1B0GV90 55 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 IFITM10A6NMD0 228 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 K7EP13 123 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 RBX1P62877 108 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 MPV17L2Q567V2 206 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 LINC01556Q5JQF7 62 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 WFDC10BQ8IUB3 73 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 ZNF664Q8N3J9 261 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 CDC42SE2Q9NRR3 84 aa7.23□□□□□ -1.25
HLA-DMB-261ENST00000487996 C20orf202A1L168 122 aa7.22□□□□□ -1.25
HLA-DMB-261ENST00000487996 SIVA1O15304 175 aa7.22□□□□□ -1.25
HLA-DMB-261ENST00000487996 DNAH10OSP0CZ25 163 aa7.22□□□□□ -1.25
HLA-DMB-261ENST00000487996 KRTDAPP60985 99 aa7.22□□□□□ -1.25
HLA-DMB-261ENST00000487996 PMVKQ15126 192 aa7.22□□□□□ -1.25
HLA-DMB-261ENST00000487996 SPATA12Q7Z6I5 190 aa7.22□□□□□ -1.25
HLA-DMB-261ENST00000487996 OR10D4PQ8NGN7 298 aa7.22□□□□□ -1.25
HLA-DMB-261ENST00000487996 BAALCQ8WXS3 180 aa7.22□□□□□ -1.25
HLA-DMB-261ENST00000487996 TRAV9-2A0A087WT02 112 aa7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 TRAV12-1A0A0B4J245 112 aa7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 SYS1-DBNDD2H3BUS1 97 aa7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 ANGP03950 147 aaKnown RBP7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 CASC10Q5T4H9 136 aa7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 PET117Q6UWS5 81 aa7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 Q6ZUT4 128 aa7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 LINC00173Q6ZV60 143 aa7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 C10orf126Q8N4M7 172 aa7.21□□□□□ -1.25
HLA-DMB-261ENST00000487996 DYNC2H1Q8NCM8 4307 aaKnown RBP7.21□□□□□ -1.26
HLA-DMB-261ENST00000487996 C3orf79P0CE67 100 aa7.21□□□□□ -1.26
HLA-DMB-261ENST00000487996 Q8N976 141 aa7.21□□□□□ -1.26
HLA-DMB-261ENST00000487996 AMELXQ99217 191 aa7.21□□□□□ -1.26
HLA-DMB-261ENST00000487996 CSMD3Q7Z407 3707 aa7.21□□□□□ -1.26
HLA-DMB-261ENST00000487996 IGLV4-60A0A075B6I1 120 aa7.2□□□□□ -1.26
HLA-DMB-261ENST00000487996 H0Y8G0 127 aa7.2□□□□□ -1.26
HLA-DMB-261ENST00000487996 CCL25O15444 150 aa7.2□□□□□ -1.26
HLA-DMB-261ENST00000487996 CRPP02741 224 aa7.2□□□□□ -1.26
HLA-DMB-261ENST00000487996 SEC11AP67812 179 aa7.2□□□□□ -1.26
HLA-DMB-261ENST00000487996 OPRPNQ99935 248 aaPredicted RBP7.2□□□□□ -1.26
HLA-DMB-261ENST00000487996 CST9LQ9H4G1 147 aa7.2□□□□□ -1.26
HLA-DMB-261ENST00000487996 Q9H8V8 135 aa7.2□□□□□ -1.26
HLA-DMB-261ENST00000487996 TENM2Q9NT68 2774 aa7.19□□□□□ -1.26
HLA-DMB-261ENST00000487996 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
HLA-DMB-261ENST00000487996 IGHV3-33P01772 117 aa7.19□□□□□ -1.26
HLA-DMB-261ENST00000487996 IGHV3-30-3P0DP02 117 aa7.19□□□□□ -1.26
HLA-DMB-261ENST00000487996 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
HLA-DMB-261ENST00000487996 LGALS9CQ6DKI2 356 aa7.19□□□□□ -1.26
HLA-DMB-261ENST00000487996 PRSS29PA6NIE9 313 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 LINC00269Q8N2A0 174 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 F8VRH5 84 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 PLNP26678 52 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 REG3AQ06141 175 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 ODF1Q14990 250 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 RNASE13Q5GAN3 156 aaKnown RBP7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 TTC32Q5I0X7 151 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 LINC01545Q5VT33 79 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 FAM104AQ969W3 186 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 PRR34Q9NV39 138 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 KLK12Q9UKR0 248 aa7.18□□□□□ -1.26
HLA-DMB-261ENST00000487996 STARD9Q9P2P6 4700 aa7.17□□□□□ -1.26
HLA-DMB-261ENST00000487996 TRAV13-1A0A0B4J241 112 aa7.17□□□□□ -1.26
HLA-DMB-261ENST00000487996 SS18Q15532 418 aa7.17□□□□□ -1.26
HLA-DMB-261ENST00000487996 TRAV8-4A0A0B4J246 113 aa7.16□□□□□ -1.26
HLA-DMB-261ENST00000487996 DPM2O94777 84 aa7.16□□□□□ -1.26
HLA-DMB-261ENST00000487996 SCGB1D1O95968 90 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms