RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 TRAV8-4A0A0B4J246 113 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 TSHBP01222 138 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 FCER1GP30273 86 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 RPL32P62910 135 aaKnown RBP8.1□□□□□ -1.11
SFXN3-206ENST00000487721 REG3AQ06141 175 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 SMAGPQ0VAQ4 97 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 C14orf177Q52M58 125 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 RNASEKQ6P5S7 137 aaKnown RBP8.1□□□□□ -1.11
SFXN3-206ENST00000487721 BAALCQ8WXS3 180 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 TMEM101Q96IK0 257 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 KIR2DL4Q99706 377 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 PRR34Q9NV39 138 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 HSPG2P98160 4391 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 LRP1BQ9NZR2 4599 aa8.1□□□□□ -1.11
SFXN3-206ENST00000487721 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
SFXN3-206ENST00000487721 LOC389332A0A1B0GUA5 103 aa8.09□□□□□ -1.11
SFXN3-206ENST00000487721 LECT2O14960 151 aa8.09□□□□□ -1.11
SFXN3-206ENST00000487721 GCSHP23434 173 aa8.09□□□□□ -1.11
SFXN3-206ENST00000487721 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
SFXN3-206ENST00000487721 CLPSL2Q6UWE3 100 aa8.09□□□□□ -1.11
SFXN3-206ENST00000487721 ALKBH7Q9BT30 221 aaPredicted RBP8.09□□□□□ -1.11
SFXN3-206ENST00000487721 COLCA2A8K830 154 aa8.08□□□□□ -1.12
SFXN3-206ENST00000487721 TCAPO15273 167 aa8.08□□□□□ -1.12
SFXN3-206ENST00000487721 ZNF25P17030 456 aaPredicted RBP8.08□□□□□ -1.12
SFXN3-206ENST00000487721 C20orf203Q8NBC4 194 aa8.08□□□□□ -1.12
SFXN3-206ENST00000487721 IGLV4-60A0A075B6I1 120 aa8.07□□□□□ -1.12
SFXN3-206ENST00000487721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
SFXN3-206ENST00000487721 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
SFXN3-206ENST00000487721 PRSS47A8MTI9 375 aa8.07□□□□□ -1.12
SFXN3-206ENST00000487721 FGF6P10767 208 aa8.07□□□□□ -1.12
SFXN3-206ENST00000487721 ESDP10768 282 aa8.06□□□□□ -1.12
SFXN3-206ENST00000487721 RAB5AP20339 215 aa8.06□□□□□ -1.12
SFXN3-206ENST00000487721 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
SFXN3-206ENST00000487721 IFI27P40305 119 aaPredicted RBP8.06□□□□□ -1.12
SFXN3-206ENST00000487721 DGAT2L7PQ6IED9 249 aa8.06□□□□□ -1.12
SFXN3-206ENST00000487721 Q8N8P6 123 aa8.06□□□□□ -1.12
SFXN3-206ENST00000487721 OR5A1Q8NGJ0 315 aa8.06□□□□□ -1.12
SFXN3-206ENST00000487721 TMEM18Q96B42 140 aa8.06□□□□□ -1.12
SFXN3-206ENST00000487721 IGLV10-54A0A075B6I4 117 aa8.05□□□□□ -1.12
SFXN3-206ENST00000487721 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.05□□□□□ -1.12
SFXN3-206ENST00000487721 TRGC2P03986 189 aa8.05□□□□□ -1.12
SFXN3-206ENST00000487721 NXT2Q9NPJ8 142 aaKnown RBP8.05□□□□□ -1.12
SFXN3-206ENST00000487721 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
SFXN3-206ENST00000487721 WFDC2Q14508 124 aa8.04□□□□□ -1.12
SFXN3-206ENST00000487721 PRSS3P2Q8NHM4 247 aa8.04□□□□□ -1.12
SFXN3-206ENST00000487721 C18orf32Q8TCD1 76 aa8.04□□□□□ -1.12
SFXN3-206ENST00000487721 USP17L23D6RBM5 183 aa8.03□□□□□ -1.12
SFXN3-206ENST00000487721 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
SFXN3-206ENST00000487721 MRPL52Q86TS9 123 aaKnown RBP8.03□□□□□ -1.12
SFXN3-206ENST00000487721 K7EMI3 77 aa8.02□□□□□ -1.13
SFXN3-206ENST00000487721 ORMDL2Q53FV1 153 aa8.02□□□□□ -1.13
SFXN3-206ENST00000487721 CFAP161Q6P656 301 aa8.02□□□□□ -1.13
SFXN3-206ENST00000487721 FA2HQ7L5A8 372 aa8.02□□□□□ -1.13
SFXN3-206ENST00000487721 RPL39P62891 51 aaKnown RBP8.01□□□□□ -1.13
SFXN3-206ENST00000487721 SS18Q15532 418 aa8.01□□□□□ -1.13
SFXN3-206ENST00000487721 ZNF664Q8N3J9 261 aa8.01□□□□□ -1.13
SFXN3-206ENST00000487721 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
SFXN3-206ENST00000487721 EPM2AB3EWF7 344 aa8□□□□□ -1.13
SFXN3-206ENST00000487721 CHCHD10Q8WYQ3 142 aaPredicted RBP8□□□□□ -1.13
SFXN3-206ENST00000487721 CDC42SE2Q9NRR3 84 aa8□□□□□ -1.13
SFXN3-206ENST00000487721 AP5S1Q9NUS5 200 aa8□□□□□ -1.13
SFXN3-206ENST00000487721 UBE2D4Q9Y2X8 147 aa8□□□□□ -1.13
SFXN3-206ENST00000487721 CSDC2Q9Y534 153 aaKnown RBP8□□□□□ -1.13
SFXN3-206ENST00000487721 APOBP04114 4563 aaKnown RBP8□□□□□ -1.13
SFXN3-206ENST00000487721 hDV102S1A0JD36 115 aa7.99□□□□□ -1.13
SFXN3-206ENST00000487721 LINC01546A6NGU7 62 aa7.99□□□□□ -1.13
SFXN3-206ENST00000487721 CCL25O15444 150 aa7.99□□□□□ -1.13
SFXN3-206ENST00000487721 KRTAP26-1Q6PEX3 210 aa7.99□□□□□ -1.13
SFXN3-206ENST00000487721 C2orf66Q6UXQ4 117 aa7.99□□□□□ -1.13
SFXN3-206ENST00000487721 URB1-AS1Q96HZ7 61 aa7.99□□□□□ -1.13
SFXN3-206ENST00000487721 CYSLTR1Q9Y271 337 aa7.99□□□□□ -1.13
SFXN3-206ENST00000487721 LINC00959A0A1B0GUT2 108 aa7.98□□□□□ -1.13
SFXN3-206ENST00000487721 PRSS1P07477 247 aa7.98□□□□□ -1.13
SFXN3-206ENST00000487721 RAB5BP61020 215 aa7.98□□□□□ -1.13
SFXN3-206ENST00000487721 TIMM21Q9BVV7 248 aa7.98□□□□□ -1.13
SFXN3-206ENST00000487721 SPANXA1Q9NS26 97 aa7.98□□□□□ -1.13
SFXN3-206ENST00000487721 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.97□□□□□ -1.13
SFXN3-206ENST00000487721 C1orf196B1AJZ1 125 aa7.97□□□□□ -1.13
SFXN3-206ENST00000487721 LINC00614P0C842 121 aa7.97□□□□□ -1.13
SFXN3-206ENST00000487721 G0S2P27469 103 aa7.97□□□□□ -1.13
SFXN3-206ENST00000487721 XCL1P47992 114 aa7.97□□□□□ -1.13
SFXN3-206ENST00000487721 Q6ZUT4 128 aa7.97□□□□□ -1.13
SFXN3-206ENST00000487721 BAGE3Q86Y29 109 aa7.97□□□□□ -1.13
SFXN3-206ENST00000487721 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
SFXN3-206ENST00000487721 XGP55808 180 aa7.96□□□□□ -1.14
SFXN3-206ENST00000487721 RNASE13Q5GAN3 156 aaKnown RBP7.96□□□□□ -1.14
SFXN3-206ENST00000487721 TOMM6Q96B49 74 aa7.96□□□□□ -1.14
SFXN3-206ENST00000487721 SMCPP49901 116 aaPredicted RBP7.95□□□□□ -1.14
SFXN3-206ENST00000487721 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
SFXN3-206ENST00000487721 CD164L2Q6UWJ8 174 aa7.95□□□□□ -1.14
SFXN3-206ENST00000487721 CHCHD1Q96BP2 118 aaKnown RBP7.95□□□□□ -1.14
SFXN3-206ENST00000487721 OPRPNQ99935 248 aaPredicted RBP7.95□□□□□ -1.14
SFXN3-206ENST00000487721 PYGO1Q9Y3Y4 419 aa7.95□□□□□ -1.14
SFXN3-206ENST00000487721 A0A096LNJ9 63 aa7.94□□□□□ -1.14
SFXN3-206ENST00000487721 TRAV13-1A0A0B4J241 112 aa7.94□□□□□ -1.14
SFXN3-206ENST00000487721 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
SFXN3-206ENST00000487721 HIST1H2BKO60814 126 aa7.94□□□□□ -1.14
SFXN3-206ENST00000487721 HIST1H2BJP06899 126 aa7.94□□□□□ -1.14
SFXN3-206ENST00000487721 HIST1H2BOP23527 126 aa7.94□□□□□ -1.14
SFXN3-206ENST00000487721 HIST1H2BBP33778 126 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms