RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TEN1Q86WV5 123 aa18.76■□□□□ 0.59
HLA-C-208ENST00000487245 NDUFA12Q9UI09 145 aa18.76■□□□□ 0.59
HLA-C-208ENST00000487245 IGLV5-45A0A087WSX0 123 aa18.75■□□□□ 0.59
HLA-C-208ENST00000487245 TRGV1A0A0A0MS02 117 aa18.75■□□□□ 0.59
HLA-C-208ENST00000487245 TRAV8-3A0A0A6YYJ7 113 aa18.75■□□□□ 0.59
HLA-C-208ENST00000487245 SCGB1C2P0DMR2 95 aa18.75■□□□□ 0.59
HLA-C-208ENST00000487245 PPDPFLQ8WWR9 84 aa18.75■□□□□ 0.59
HLA-C-208ENST00000487245 RNF183Q96D59 192 aa18.75■□□□□ 0.59
HLA-C-208ENST00000487245 RNASE13Q5GAN3 156 aaKnown RBP18.74■□□□□ 0.59
HLA-C-208ENST00000487245 SONP18583 2426 aaKnown RBP18.74■□□□□ 0.59
HLA-C-208ENST00000487245 TRBV10-1A0A0K0K1A3 114 aa18.73■□□□□ 0.59
HLA-C-208ENST00000487245 TIMM17BO60830 172 aa18.73■□□□□ 0.59
HLA-C-208ENST00000487245 ZFAND6Q6FIF0 208 aa18.73■□□□□ 0.59
HLA-C-208ENST00000487245 GTSF1LQ9H1H1 148 aa18.73■□□□□ 0.59
HLA-C-208ENST00000487245 FLNAP21333 2647 aaKnown RBP18.72■□□□□ 0.59
HLA-C-208ENST00000487245 TRAV4A0A0B4J268 109 aa18.72■□□□□ 0.59
HLA-C-208ENST00000487245 IGHV3-38A0A0C4DH36 116 aa18.71■□□□□ 0.59
HLA-C-208ENST00000487245 GEMIN7Q9H840 131 aaKnown RBP18.71■□□□□ 0.59
HLA-C-208ENST00000487245 ADARB2-AS1A8MUL3 147 aa18.71■□□□□ 0.59
HLA-C-208ENST00000487245 DAZ2Q13117 558 aaKnown RBP18.71■□□□□ 0.59
HLA-C-208ENST00000487245 MIAQ16674 131 aa18.71■□□□□ 0.59
HLA-C-208ENST00000487245 FAM19A3Q7Z5A8 133 aa18.71■□□□□ 0.59
HLA-C-208ENST00000487245 LINC01600Q96MT4 127 aa18.7■□□□□ 0.58
HLA-C-208ENST00000487245 TRBV30A0A0K0K1B3 111 aa18.69■□□□□ 0.58
HLA-C-208ENST00000487245 SPINK8P0C7L1 97 aa18.69■□□□□ 0.58
HLA-C-208ENST00000487245 RPL36AP83881 106 aaKnown RBP18.69■□□□□ 0.58
HLA-C-208ENST00000487245 RPL36ALQ969Q0 106 aaKnown RBP18.69■□□□□ 0.58
HLA-C-208ENST00000487245 C16orf74Q96GX8 76 aa18.69■□□□□ 0.58
HLA-C-208ENST00000487245 CARD19Q96LW7 228 aa18.69■□□□□ 0.58
HLA-C-208ENST00000487245 GCN1Q92616 2671 aaKnown RBP18.69■□□□□ 0.58
HLA-C-208ENST00000487245 C19orf73Q9NVV2 129 aa18.69■□□□□ 0.58
HLA-C-208ENST00000487245 PDZD2O15018 2839 aa18.68■□□□□ 0.58
HLA-C-208ENST00000487245 K7EQD1 137 aa18.68■□□□□ 0.58
HLA-C-208ENST00000487245 CIDEAO60543 219 aa18.68■□□□□ 0.58
HLA-C-208ENST00000487245 GIG44P09565 113 aaPredicted RBP18.68■□□□□ 0.58
HLA-C-208ENST00000487245 ADAMTSL4-AS1Q5T5F5 129 aa18.68■□□□□ 0.58
HLA-C-208ENST00000487245 ZNF469Q96JG9 3925 aaPredicted RBP18.68■□□□□ 0.58
HLA-C-208ENST00000487245 CCDC168Q8NDH2 2452 aa18.67■□□□□ 0.58
HLA-C-208ENST00000487245 Q6ZTI0 123 aa18.67■□□□□ 0.58
HLA-C-208ENST00000487245 CSDC2Q9Y534 153 aaKnown RBP18.67■□□□□ 0.58
HLA-C-208ENST00000487245 DAZ4Q86SG3 579 aaKnown RBP18.67■□□□□ 0.58
HLA-C-208ENST00000487245 DAZ3Q9NR90 486 aaKnown RBP18.67■□□□□ 0.58
HLA-C-208ENST00000487245 NDUFA1O15239 70 aa18.66■□□□□ 0.58
HLA-C-208ENST00000487245 IFITM1P13164 125 aa18.66■□□□□ 0.58
HLA-C-208ENST00000487245 SMAGPQ0VAQ4 97 aa18.65■□□□□ 0.58
HLA-C-208ENST00000487245 DGAT2L7PQ6IED9 249 aa18.65■□□□□ 0.58
HLA-C-208ENST00000487245 CDKN2A-AS1Q9UH64 79 aa18.65■□□□□ 0.58
HLA-C-208ENST00000487245 AKAP9Q99996 3911 aa18.64■□□□□ 0.57
HLA-C-208ENST00000487245 SLC25A20O43772 301 aa18.64■□□□□ 0.57
HLA-C-208ENST00000487245 HERVK_113P63121 156 aa18.64■□□□□ 0.57
HLA-C-208ENST00000487245 ATXN8Q156A1 80 aa18.64■□□□□ 0.57
HLA-C-208ENST00000487245 CDIP1Q9H305 208 aa18.64■□□□□ 0.57
HLA-C-208ENST00000487245 IGLV5-39A0A0G2JS06 123 aa18.63■□□□□ 0.57
HLA-C-208ENST00000487245 ANKRD29Q8N6D5 301 aa18.63■□□□□ 0.57
HLA-C-208ENST00000487245 NOP10Q9NPE3 64 aaKnown RBP18.63■□□□□ 0.57
HLA-C-208ENST00000487245 WNK1Q9H4A3 2382 aa18.63■□□□□ 0.57
HLA-C-208ENST00000487245 PRSS2P07478 247 aa18.63■□□□□ 0.57
HLA-C-208ENST00000487245 RPL35AP18077 110 aaKnown RBP18.63■□□□□ 0.57
HLA-C-208ENST00000487245 Q1RN00 199 aa18.63■□□□□ 0.57
HLA-C-208ENST00000487245 TMEM101Q96IK0 257 aa18.63■□□□□ 0.57
HLA-C-208ENST00000487245 A8MZ25 164 aa18.62■□□□□ 0.57
HLA-C-208ENST00000487245 H7C2G1 150 aa18.61■□□□□ 0.57
HLA-C-208ENST00000487245 OVOL2Q9BRP0 275 aa18.61■□□□□ 0.57
HLA-C-208ENST00000487245 C9JAW5 83 aa18.6■□□□□ 0.57
HLA-C-208ENST00000487245 FASNP49327 2511 aaKnown RBP18.6■□□□□ 0.57
HLA-C-208ENST00000487245 LINC00242Q5T6M2 205 aa18.6■□□□□ 0.57
HLA-C-208ENST00000487245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.6■□□□□ 0.57
HLA-C-208ENST00000487245 CSNK1G2-AS1Q8NCQ2 148 aa18.6■□□□□ 0.57
HLA-C-208ENST00000487245 TRIAP1O43715 76 aa18.59■□□□□ 0.57
HLA-C-208ENST00000487245 LINC01620Q4KN68 170 aa18.59■□□□□ 0.57
HLA-C-208ENST00000487245 WFDC10AQ9H1F0 79 aa18.59■□□□□ 0.57
HLA-C-208ENST00000487245 NBPF19A0A087WUL8 3843 aa18.58■□□□□ 0.57
HLA-C-208ENST00000487245 PLAC8L1A1L4L8 177 aa18.58■□□□□ 0.57
HLA-C-208ENST00000487245 COX6A2Q02221 97 aa18.58■□□□□ 0.56
HLA-C-208ENST00000487245 NTM-AS1Q6ZSK4 140 aa18.58■□□□□ 0.56
HLA-C-208ENST00000487245 ICOSQ9Y6W8 199 aa18.58■□□□□ 0.56
HLA-C-208ENST00000487245 LINC00694P0DN24 101 aa18.56■□□□□ 0.56
HLA-C-208ENST00000487245 TRGV2A0A075B6R0 118 aa18.56■□□□□ 0.56
HLA-C-208ENST00000487245 PF4P02776 101 aa18.55■□□□□ 0.56
HLA-C-208ENST00000487245 CIRBPQ14011 172 aaKnown RBP18.55■□□□□ 0.56
HLA-C-208ENST00000487245 TRBV6-4A0A1B0GX49 114 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 GAGE12JA6NER3 117 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 GAGE7O76087 117 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 GAGE12FP0CL80 117 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 GAGE12GP0CL81 117 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 GAGE12IP0CL82 117 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 GAGE4Q13068 117 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 GAGE5Q13069 117 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 TRBV10-2A0A0K0K1G8 114 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 SMR3AQ99954 134 aa18.54■□□□□ 0.56
HLA-C-208ENST00000487245 LY6G6DO95868 133 aa18.53■□□□□ 0.56
HLA-C-208ENST00000487245 CDC42SE2Q9NRR3 84 aa18.53■□□□□ 0.56
HLA-C-208ENST00000487245 TMEM262E9PQX1 116 aa18.52■□□□□ 0.56
HLA-C-208ENST00000487245 COX6CP09669 75 aa18.52■□□□□ 0.56
HLA-C-208ENST00000487245 ANK3Q12955 4377 aaKnown RBP18.52■□□□□ 0.55
HLA-C-208ENST00000487245 SMIM1B2RUZ4 78 aa18.52■□□□□ 0.55
HLA-C-208ENST00000487245 LINC00482Q8N8I6 264 aa18.52■□□□□ 0.55
HLA-C-208ENST00000487245 KRTAP10-3P60369 221 aa18.51■□□□□ 0.55
HLA-C-208ENST00000487245 ACANP16112 2415 aa18.51■□□□□ 0.55
HLA-C-208ENST00000487245 UNC79Q9P2D8 2635 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms