RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 LINC00242Q5T6M2 205 aa8.79□□□□□ -1
COL3A1-206ENST00000487010 MAP6D1Q9H9H5 199 aa8.79□□□□□ -1
COL3A1-206ENST00000487010 Q6YL49 198 aa8.78□□□□□ -1
COL3A1-206ENST00000487010 INSP01308 110 aa8.77□□□□□ -1
COL3A1-206ENST00000487010 FAM19A3Q7Z5A8 133 aa8.77□□□□□ -1
COL3A1-206ENST00000487010 COX7A2LO14548 114 aa8.77□□□□□ -1.01
COL3A1-206ENST00000487010 MAPK1IP1LQ8NDC0 245 aa8.77□□□□□ -1.01
COL3A1-206ENST00000487010 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
COL3A1-206ENST00000487010 PEMTQ9UBM1 199 aa8.77□□□□□ -1.01
COL3A1-206ENST00000487010 A0A096LNT2 108 aa8.76□□□□□ -1.01
COL3A1-206ENST00000487010 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
COL3A1-206ENST00000487010 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
COL3A1-206ENST00000487010 SMIM1B2RUZ4 78 aa8.76□□□□□ -1.01
COL3A1-206ENST00000487010 LINC00694P0DN24 101 aa8.76□□□□□ -1.01
COL3A1-206ENST00000487010 SHISA2Q6UWI4 295 aa8.76□□□□□ -1.01
COL3A1-206ENST00000487010 COPS9Q8WXC6 57 aa8.76□□□□□ -1.01
COL3A1-206ENST00000487010 NCOR2Q9Y618 2525 aa8.76□□□□□ -1.01
COL3A1-206ENST00000487010 CRYBG3Q68DQ2 2970 aa8.75□□□□□ -1.01
COL3A1-206ENST00000487010 SPTBN4Q9H254 2564 aa8.75□□□□□ -1.01
COL3A1-206ENST00000487010 TRBV7-7A0A0K0K1E9 115 aa8.75□□□□□ -1.01
COL3A1-206ENST00000487010 NDUFA7O95182 113 aa8.74□□□□□ -1.01
COL3A1-206ENST00000487010 FSHBP01225 129 aa8.74□□□□□ -1.01
COL3A1-206ENST00000487010 ACYP1P07311 99 aa8.74□□□□□ -1.01
COL3A1-206ENST00000487010 DYNLRB2Q8TF09 96 aa8.74□□□□□ -1.01
COL3A1-206ENST00000487010 CSDC2Q9Y534 153 aaKnown RBP8.74□□□□□ -1.01
COL3A1-206ENST00000487010 CHD8Q9HCK8 2581 aa8.74□□□□□ -1.01
COL3A1-206ENST00000487010 DEFB114Q30KQ6 69 aa8.74□□□□□ -1.01
COL3A1-206ENST00000487010 Q8N2B8 174 aa8.74□□□□□ -1.01
COL3A1-206ENST00000487010 TRAV13-1A0A0B4J241 112 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 PRIMA1Q86XR5 153 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 XCL2Q9UBD3 114 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 CELSR2Q9HCU4 2923 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 SPG11Q96JI7 2443 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 IL17DQ8TAD2 202 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 C4orf3Q8WVX3 66 aa8.73□□□□□ -1.01
COL3A1-206ENST00000487010 F5H768 121 aa8.72□□□□□ -1.01
COL3A1-206ENST00000487010 TRACP01848 142 aa8.72□□□□□ -1.01
COL3A1-206ENST00000487010 RPL36AP83881 106 aaKnown RBP8.72□□□□□ -1.01
COL3A1-206ENST00000487010 RPL36ALQ969Q0 106 aaKnown RBP8.72□□□□□ -1.01
COL3A1-206ENST00000487010 TRGV1A0A0A0MS02 117 aa8.71□□□□□ -1.01
COL3A1-206ENST00000487010 TRBV10-1A0A0K0K1A3 114 aa8.71□□□□□ -1.01
COL3A1-206ENST00000487010 HERV-K104P63124 156 aa8.71□□□□□ -1.01
COL3A1-206ENST00000487010 DAZ2Q13117 558 aaKnown RBP8.71□□□□□ -1.01
COL3A1-206ENST00000487010 DAZ4Q86SG3 579 aaKnown RBP8.71□□□□□ -1.01
COL3A1-206ENST00000487010 C1orf158Q8N1D5 194 aa8.71□□□□□ -1.01
COL3A1-206ENST00000487010 DAZ3Q9NR90 486 aaKnown RBP8.71□□□□□ -1.01
COL3A1-206ENST00000487010 CDC42SE2Q9NRR3 84 aa8.71□□□□□ -1.01
COL3A1-206ENST00000487010 MAP1AP78559 2803 aaPredicted RBP8.71□□□□□ -1.02
COL3A1-206ENST00000487010 K7EQD1 137 aa8.71□□□□□ -1.02
COL3A1-206ENST00000487010 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
COL3A1-206ENST00000487010 PPDPFQ9H3Y8 114 aa8.71□□□□□ -1.02
COL3A1-206ENST00000487010 IMUPQ9GZP8 106 aa8.7□□□□□ -1.02
COL3A1-206ENST00000487010 BAALC-AS2P0C853 105 aa8.69□□□□□ -1.02
COL3A1-206ENST00000487010 KHDC1LQ5JSQ8 128 aa8.69□□□□□ -1.02
COL3A1-206ENST00000487010 ODF3L2Q3SX64 289 aa8.69□□□□□ -1.02
COL3A1-206ENST00000487010 STHQ8IWL8 128 aa8.69□□□□□ -1.02
COL3A1-206ENST00000487010 SMCR5Q8TEV8 140 aa8.69□□□□□ -1.02
COL3A1-206ENST00000487010 IGHV4-31P0DP07 118 aa8.68□□□□□ -1.02
COL3A1-206ENST00000487010 Q6ZTI0 123 aa8.68□□□□□ -1.02
COL3A1-206ENST00000487010 Q96MF0 132 aa8.68□□□□□ -1.02
COL3A1-206ENST00000487010 FAM218AQ96MZ4 157 aa8.68□□□□□ -1.02
COL3A1-206ENST00000487010 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
COL3A1-206ENST00000487010 LINC00643Q86TS7 51 aa8.68□□□□□ -1.02
COL3A1-206ENST00000487010 HIST2H2BCQ6DN03 193 aa8.67□□□□□ -1.02
COL3A1-206ENST00000487010 HIST2H2BDQ6DRA6 164 aa8.67□□□□□ -1.02
COL3A1-206ENST00000487010 SDIM1Q6ZPB5 146 aa8.67□□□□□ -1.02
COL3A1-206ENST00000487010 CREBBPQ92793 2442 aa8.67□□□□□ -1.02
COL3A1-206ENST00000487010 PF4P02776 101 aa8.66□□□□□ -1.02
COL3A1-206ENST00000487010 FAM222AQ5U5X8 452 aa8.66□□□□□ -1.02
COL3A1-206ENST00000487010 TRAV13-2A0A0B4J235 113 aa8.66□□□□□ -1.02
COL3A1-206ENST00000487010 TRAV25A0A0B4J276 109 aa8.66□□□□□ -1.02
COL3A1-206ENST00000487010 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
COL3A1-206ENST00000487010 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
COL3A1-206ENST00000487010 RPL28P46779 137 aaKnown RBP8.66□□□□□ -1.02
COL3A1-206ENST00000487010 TMEM243Q9BU79 118 aa8.66□□□□□ -1.02
COL3A1-206ENST00000487010 UBE2L6O14933 153 aa8.65□□□□□ -1.02
COL3A1-206ENST00000487010 CR1P17927 2039 aa8.65□□□□□ -1.03
COL3A1-206ENST00000487010 DOPEY1Q5JWR5 2465 aa8.64□□□□□ -1.03
COL3A1-206ENST00000487010 COX7B2Q8TF08 81 aa8.64□□□□□ -1.03
COL3A1-206ENST00000487010 CSMD2Q7Z408 3487 aa8.64□□□□□ -1.03
COL3A1-206ENST00000487010 CRPP02741 224 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 MALP21145 153 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 LINC00337Q8N6G1 96 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 Q9HAA7 133 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 NOP10Q9NPE3 64 aaKnown RBP8.63□□□□□ -1.03
COL3A1-206ENST00000487010 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
COL3A1-206ENST00000487010 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 PKD1L2Q7Z442 2459 aa8.63□□□□□ -1.03
COL3A1-206ENST00000487010 CFAP46Q8IYW2 2715 aa8.62□□□□□ -1.03
COL3A1-206ENST00000487010 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
COL3A1-206ENST00000487010 FAM110AQ9BQ89 295 aa8.62□□□□□ -1.03
COL3A1-206ENST00000487010 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
COL3A1-206ENST00000487010 FLNCQ14315 2725 aa8.61□□□□□ -1.03
COL3A1-206ENST00000487010 CXCL5P42830 114 aa8.61□□□□□ -1.03
COL3A1-206ENST00000487010 GAGE2AQ6NT46 116 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms