RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 HTN1P15515 57 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 LGALS3P17931 250 aaKnown RBP5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 PROK1P58294 105 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 TSPEAR-AS2P59090 65 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 RBX1P62877 108 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 DAZ2Q13117 558 aaKnown RBP5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 COTL1Q14019 142 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 RRN3P1Q2M238 152 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 OCIAD2Q56VL3 154 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 ZNF479Q96JC4 524 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 C1QTNF4Q9BXJ3 329 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 UBE2D4Q9Y2X8 147 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 FLNAP21333 2647 aaKnown RBP5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 TRAV4A0A0B4J268 109 aa5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 TINCRA0A1B0GVN0 87 aa5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 EMP1P54849 157 aa5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 SMAGPQ0VAQ4 97 aa5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 LYRM7Q5U5X0 104 aa5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 FAM104AQ969W3 186 aa5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 C16orf74Q96GX8 76 aa5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 MRPL16Q9NX20 251 aaKnown RBP5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 CSDC2Q9Y534 153 aaKnown RBP5.06□□□□□ -1.6
SMARCAL1-212ENST00000486983 ZNF469Q96JG9 3925 aaPredicted RBP5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGLV5-45A0A087WSX0 123 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGHV3-73A0A0B4J1V6 119 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 A0A0J9YXV3 536 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 TMEM238C9JI98 176 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 F8W1H4 67 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 K7EQD1 137 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 SAP30O75446 220 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGHV3-30P01768 117 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGHV3-30-5P0DP03 117 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 GYPEP15421 78 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 AZU1P20160 251 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 SRSF9Q13242 221 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 FAM19A3Q7Z5A8 133 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 DAZ4Q86SG3 579 aaKnown RBP5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 NDUFA11Q86Y39 141 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 OPRPNQ99935 248 aaPredicted RBP5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 DAZ3Q9NR90 486 aaKnown RBP5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 XCL2Q9UBD3 114 aa5.05□□□□□ -1.6
SMARCAL1-212ENST00000486983 ANK3Q12955 4377 aaKnown RBP5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 TRGV1A0A0A0MS02 117 aa5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGHV1-58A0A0C4DH39 117 aa5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 LY6G6DO95868 133 aa5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 TIRAPP58753 221 aa5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 KRTAP21-3Q3LHN1 58 aa5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 C11orf44Q8N8P7 122 aa5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 NAA38Q9BRA0 125 aaKnown RBP5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 OVOL2Q9BRP0 275 aa5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 GTSF1LQ9H1H1 148 aa5.04□□□□□ -1.6
SMARCAL1-212ENST00000486983 C2CD3Q4AC94 2353 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 A0A0B4J2C4 111 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 TRBV6-4A0A1B0GX49 114 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 PLAC8L1A1L4L8 177 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 H7C423 109 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 TIMM17BO60830 172 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 PRM2P04554 102 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 GIG44P09565 113 aaPredicted RBP5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGHV3-30-3P0DP02 117 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 UBE2D3P61077 147 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 UBE2D2P62837 147 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 Q6ZUT4 128 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 CSNK1G2-AS1Q8NCQ2 148 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 DEFB104AQ8WTQ1 72 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 RNF183Q96D59 192 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 VSIG2Q96IQ7 327 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 CCDC168Q8NDH2 2452 aa5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 SETD2Q9BYW2 2564 aaPredicted RBP5.03□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 A0A0J9YXY3 114 aa5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 IGKV2-29A2NJV5 120 aaPredicted RBP5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 TSPAN13O95857 204 aa5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 INSL3P51460 131 aa5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 HERVK_113P63121 156 aa5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 ZFAND6Q6FIF0 208 aa5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 SBSPONQ8IVN8 264 aa5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 C10orf126Q8N4M7 172 aa5.02□□□□□ -1.61
SMARCAL1-212ENST00000486983 TRBV20-1A0A075B6N2 111 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 IGHV3OR16-12A0A075B7B8 117 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 G3V4G9 280 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 CFC1BP0CG36 223 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 CFC1P0CG37 223 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 HIST2H2BDQ6DRA6 164 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 KRTAP5-11Q6L8G4 156 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 Q6ZTI0 123 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 LINC00476Q8WZB0 136 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 LITAFQ99732 161 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 PPDPFQ9H3Y8 114 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 GEMIN7Q9H840 131 aaKnown RBP5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 Q9UF83 564 aa5.01□□□□□ -1.61
SMARCAL1-212ENST00000486983 PRO0461Q9UI25 63 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms