RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 DEFB112Q30KQ8 113 aa9.05□□□□□ -0.96
HSPG2-211ENST00000486901 COX6A2Q02221 97 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 LITAFQ99732 161 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
HSPG2-211ENST00000486901 TRBV10-2A0A0K0K1G8 114 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 GAGE12JA6NER3 117 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 GAGE7O76087 117 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 GAGE12FP0CL80 117 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 GAGE12GP0CL81 117 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 GAGE12IP0CL82 117 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 GAGE4Q13068 117 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 A6NDX4 124 aa9.04□□□□□ -0.96
HSPG2-211ENST00000486901 A0A0B4J2C4 111 aa9.03□□□□□ -0.96
HSPG2-211ENST00000486901 NSUN5P1Q3KNT7 163 aa9.03□□□□□ -0.96
HSPG2-211ENST00000486901 Q8N2B8 174 aa9.03□□□□□ -0.96
HSPG2-211ENST00000486901 LINC01587Q99440 93 aa9.03□□□□□ -0.96
HSPG2-211ENST00000486901 Q9H8V8 135 aa9.03□□□□□ -0.96
HSPG2-211ENST00000486901 XCL2Q9UBD3 114 aa9.03□□□□□ -0.96
HSPG2-211ENST00000486901 TRGV11A0A075B6L2 103 aa9.03□□□□□ -0.96
HSPG2-211ENST00000486901 COX6CP09669 75 aa9.03□□□□□ -0.96
HSPG2-211ENST00000486901 TRBV6-5A0A0K0K1A5 114 aa9.02□□□□□ -0.96
HSPG2-211ENST00000486901 MEIG1Q5JSS6 88 aa9.02□□□□□ -0.96
HSPG2-211ENST00000486901 SETXQ7Z333 2677 aaKnown RBP9.02□□□□□ -0.97
HSPG2-211ENST00000486901 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.97
HSPG2-211ENST00000486901 RHOHQ15669 191 aa9.02□□□□□ -0.97
HSPG2-211ENST00000486901 Q9HAA7 133 aa9.02□□□□□ -0.97
HSPG2-211ENST00000486901 PIK3CD-AS1Q5SR53 167 aa9.02□□□□□ -0.97
HSPG2-211ENST00000486901 HERV-K104P63124 156 aa9.01□□□□□ -0.97
HSPG2-211ENST00000486901 VSIG2Q96IQ7 327 aa9.01□□□□□ -0.97
HSPG2-211ENST00000486901 NBEAL1Q6ZS30 2694 aa9.01□□□□□ -0.97
HSPG2-211ENST00000486901 K7EQG2 157 aa9.01□□□□□ -0.97
HSPG2-211ENST00000486901 IGLV1-40P01703 118 aa9.01□□□□□ -0.97
HSPG2-211ENST00000486901 SVIPQ8NHG7 77 aa9.01□□□□□ -0.97
HSPG2-211ENST00000486901 TOMM7Q9P0U1 55 aa9.01□□□□□ -0.97
HSPG2-211ENST00000486901 LINC00694P0DN24 101 aa9□□□□□ -0.97
HSPG2-211ENST00000486901 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
HSPG2-211ENST00000486901 RBMY1BA6NDE4 496 aaKnown RBP9□□□□□ -0.97
HSPG2-211ENST00000486901 RBMY1EA6NEQ0 496 aaKnown RBP9□□□□□ -0.97
HSPG2-211ENST00000486901 MSMBP08118 114 aa9□□□□□ -0.97
HSPG2-211ENST00000486901 RBMY1DP0C7P1 496 aaKnown RBP9□□□□□ -0.97
HSPG2-211ENST00000486901 MIAQ16674 131 aa8.99□□□□□ -0.97
HSPG2-211ENST00000486901 C11orf68Q9H3H3 251 aaKnown RBP8.99□□□□□ -0.97
HSPG2-211ENST00000486901 MAST4O15021 2626 aa8.99□□□□□ -0.97
HSPG2-211ENST00000486901 TRBV30A0A0K0K1B3 111 aa8.99□□□□□ -0.97
HSPG2-211ENST00000486901 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
HSPG2-211ENST00000486901 TMEM61Q8N0U2 210 aa8.99□□□□□ -0.97
HSPG2-211ENST00000486901 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
HSPG2-211ENST00000486901 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
HSPG2-211ENST00000486901 TMEM101Q96IK0 257 aa8.99□□□□□ -0.97
HSPG2-211ENST00000486901 PSMB8P28062 276 aa8.98□□□□□ -0.97
HSPG2-211ENST00000486901 CHCHD7Q9BUK0 85 aa8.98□□□□□ -0.97
HSPG2-211ENST00000486901 RPL32P62910 135 aaKnown RBP8.98□□□□□ -0.97
HSPG2-211ENST00000486901 MRPS36P82909 103 aaKnown RBP8.98□□□□□ -0.97
HSPG2-211ENST00000486901 KLK9Q2XQG4 91 aa8.98□□□□□ -0.97
HSPG2-211ENST00000486901 UBE2D4Q9Y2X8 147 aa8.98□□□□□ -0.97
HSPG2-211ENST00000486901 APCP25054 2843 aa8.98□□□□□ -0.97
HSPG2-211ENST00000486901 PLA2G2AP14555 144 aa8.97□□□□□ -0.97
HSPG2-211ENST00000486901 CITED2Q99967 270 aaPredicted RBP8.97□□□□□ -0.97
HSPG2-211ENST00000486901 TRGV1A0A0A0MS02 117 aa8.97□□□□□ -0.97
HSPG2-211ENST00000486901 PRIMA1Q86XR5 153 aa8.97□□□□□ -0.97
HSPG2-211ENST00000486901 SOSTDC1Q6X4U4 206 aa8.97□□□□□ -0.97
HSPG2-211ENST00000486901 C10orf105Q8TEF2 133 aa8.96□□□□□ -0.97
HSPG2-211ENST00000486901 KLK5Q9Y337 293 aaPredicted RBP8.96□□□□□ -0.97
HSPG2-211ENST00000486901 KRTAP10-9P60411 292 aa8.96□□□□□ -0.98
HSPG2-211ENST00000486901 ZNF469Q96JG9 3925 aaPredicted RBP8.96□□□□□ -0.98
HSPG2-211ENST00000486901 LST1O00453 97 aa8.95□□□□□ -0.98
HSPG2-211ENST00000486901 NBPF19A0A087WUL8 3843 aa8.95□□□□□ -0.98
HSPG2-211ENST00000486901 TRBV7-9A0A0J9YWB2 115 aa8.95□□□□□ -0.98
HSPG2-211ENST00000486901 CFAP161Q6P656 301 aa8.95□□□□□ -0.98
HSPG2-211ENST00000486901 DYNLRB2Q8TF09 96 aa8.95□□□□□ -0.98
HSPG2-211ENST00000486901 GAGE2AQ6NT46 116 aa8.94□□□□□ -0.98
HSPG2-211ENST00000486901 LINC00308Q8TCZ7 52 aa8.94□□□□□ -0.98
HSPG2-211ENST00000486901 SMCR5Q8TEV8 140 aa8.94□□□□□ -0.98
HSPG2-211ENST00000486901 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
HSPG2-211ENST00000486901 F8P00451 2351 aa8.94□□□□□ -0.98
HSPG2-211ENST00000486901 K7EMT4 169 aa8.94□□□□□ -0.98
HSPG2-211ENST00000486901 DAZ2Q13117 558 aaKnown RBP8.94□□□□□ -0.98
HSPG2-211ENST00000486901 DAZ4Q86SG3 579 aaKnown RBP8.94□□□□□ -0.98
HSPG2-211ENST00000486901 DAZ3Q9NR90 486 aaKnown RBP8.94□□□□□ -0.98
HSPG2-211ENST00000486901 B4DSR2 109 aa8.93□□□□□ -0.98
HSPG2-211ENST00000486901 ATP5G1P05496 136 aa8.93□□□□□ -0.98
HSPG2-211ENST00000486901 MRPL23Q16540 153 aaKnown RBP8.93□□□□□ -0.98
HSPG2-211ENST00000486901 Q96MF0 132 aa8.93□□□□□ -0.98
HSPG2-211ENST00000486901 LOC100131303A0A0U1RQF7 123 aa8.92□□□□□ -0.98
HSPG2-211ENST00000486901 CIRBPQ14011 172 aaKnown RBP8.92□□□□□ -0.98
HSPG2-211ENST00000486901 TINCRA0A1B0GVN0 87 aa8.92□□□□□ -0.98
HSPG2-211ENST00000486901 BAALC-AS2P0C853 105 aa8.92□□□□□ -0.98
HSPG2-211ENST00000486901 H3BUA1 57 aa8.91□□□□□ -0.98
HSPG2-211ENST00000486901 PFN2P35080 140 aa8.91□□□□□ -0.98
HSPG2-211ENST00000486901 LINC00242Q5T6M2 205 aa8.91□□□□□ -0.98
HSPG2-211ENST00000486901 Q6ZTI0 123 aa8.91□□□□□ -0.98
HSPG2-211ENST00000486901 SLPIP03973 132 aa8.91□□□□□ -0.98
HSPG2-211ENST00000486901 C9orf129Q5T035 196 aaKnown RBP8.91□□□□□ -0.98
HSPG2-211ENST00000486901 WFDC10AQ9H1F0 79 aa8.91□□□□□ -0.98
HSPG2-211ENST00000486901 SPANXDQ9BXN6 97 aa8.9□□□□□ -0.98
HSPG2-211ENST00000486901 SPANXCQ9NY87 97 aa8.9□□□□□ -0.98
HSPG2-211ENST00000486901 BBC3Q96PG8 261 aaPredicted RBP8.9□□□□□ -0.98
HSPG2-211ENST00000486901 IGKV3D-7A0A0C4DH55 119 aa8.89□□□□□ -0.99
HSPG2-211ENST00000486901 H3BT86 120 aa8.89□□□□□ -0.99
HSPG2-211ENST00000486901 ZNF415Q09FC8 603 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms