RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 SMIM12Q96EX1 92 aa3.53□□□□□ -1.84
PHTF1-211ENST00000486855 AP1S3Q96PC3 154 aa3.53□□□□□ -1.84
PHTF1-211ENST00000486855 CHAC1Q9BUX1 264 aa3.53□□□□□ -1.84
PHTF1-211ENST00000486855 IGLV4-60A0A075B6I1 120 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 A0A087WX48 190 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 EIF5AP63241 154 aaKnown RBP3.52□□□□□ -1.85
PHTF1-211ENST00000486855 C6orf226Q5I0X4 101 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 RNASEKQ6P5S7 137 aaKnown RBP3.52□□□□□ -1.85
PHTF1-211ENST00000486855 CLPSL2Q6UWE3 100 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 LYZL1Q6UWQ5 148 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 SLC51BQ86UW2 128 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 SLC7A5P1Q8MH63 180 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 OR2D3Q8NGH3 330 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 RNASE7Q9H1E1 156 aaKnown RBP3.52□□□□□ -1.85
PHTF1-211ENST00000486855 CBY1Q9Y3M2 126 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 URGCP-MRPS24S4R325 110 aa3.52□□□□□ -1.85
PHTF1-211ENST00000486855 LRP2P98164 4655 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 TRAV26-2A0A0B4J265 109 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 PDE6DO43924 150 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 ANGP03950 147 aaKnown RBP3.51□□□□□ -1.85
PHTF1-211ENST00000486855 MGPP08493 103 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 NTF3P20783 257 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 GNG4P50150 75 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 NKX2-5P52952 324 aaPredicted RBP3.51□□□□□ -1.85
PHTF1-211ENST00000486855 FOXA3P55318 350 aaPredicted RBP3.51□□□□□ -1.85
PHTF1-211ENST00000486855 RPS20P60866 119 aaKnown RBP3.51□□□□□ -1.85
PHTF1-211ENST00000486855 CACNG7P62955 275 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 Q0VG73 95 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 GAGE6Q13070 117 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 CIRBPQ14011 172 aaKnown RBP3.51□□□□□ -1.85
PHTF1-211ENST00000486855 ELOBQ15370 118 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 MIAQ16674 131 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 LINC00269Q8N2A0 174 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 GATD1Q8NB37 220 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 DEFB104AQ8WTQ1 72 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 RMI2Q96E14 147 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 PGLYRP4Q96LB8 373 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 CHCHD5Q9BSY4 110 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 MED9Q9NWA0 146 aa3.51□□□□□ -1.85
PHTF1-211ENST00000486855 TRBV25-1A0A075B6N4 114 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 IGHV1-24A0A0C4DH33 117 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 A0A1B0GUV1 79 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 TMEM262E9PQX1 116 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 P01737 135 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 HLA-DQA1P01909 254 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 CNBPP62633 177 aaKnown RBP3.5□□□□□ -1.85
PHTF1-211ENST00000486855 REG3AQ06141 175 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 RASL11AQ6T310 242 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 SDIM1Q6ZPB5 146 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 C15orf56Q8N910 161 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 C9orf163Q8N9P6 203 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 RPL39LQ96EH5 51 aaKnown RBP3.5□□□□□ -1.85
PHTF1-211ENST00000486855 DPH3P1Q9H4G8 78 aa3.5□□□□□ -1.85
PHTF1-211ENST00000486855 RPP21Q9H633 154 aaKnown RBP3.5□□□□□ -1.85
PHTF1-211ENST00000486855 IGLV10-54A0A075B6I4 117 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 IGLV5-37A0A075B6J1 123 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 FAM231BA6NCW3 169 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 F2Z2F3 143 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 IFNA1P01562 189 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 CRPP02741 224 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 SMIM17P0DL12 118 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 TMEM97Q5BJF2 176 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 EIF5AL1Q6IS14 154 aaKnown RBP3.49□□□□□ -1.85
PHTF1-211ENST00000486855 KCNIP4Q6PIL6 250 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 ALKAL2Q6UX46 152 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 FAM231DQ6ZW35 169 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 NIT2Q9NQR4 276 aa3.49□□□□□ -1.85
PHTF1-211ENST00000486855 A0A1B0GVG6 124 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 hDV102S1A0JD36 115 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 TMEM250H0YL14 139 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 H7C1H1 209 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 TRGC1P0CF51 173 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 CHTF8P0CG12 524 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 RPS10P46783 165 aaKnown RBP3.48□□□□□ -1.85
PHTF1-211ENST00000486855 PKIAP61925 76 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 C14orf177Q52M58 125 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 Q75L30 129 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 RNF185Q96GF1 192 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 TMEM243Q9BU79 118 aa3.48□□□□□ -1.85
PHTF1-211ENST00000486855 TRAV8-4A0A0B4J246 113 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 TRBV6-5A0A0K0K1A5 114 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 IFITM10A6NMD0 228 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 C9JQL5 133 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 TEX46H3BTG2 121 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 NDUFS6O75380 124 aaKnown RBP3.47□□□□□ -1.85
PHTF1-211ENST00000486855 TSHBP01222 138 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 SRP19P09132 144 aaKnown RBP3.47□□□□□ -1.85
PHTF1-211ENST00000486855 ESDP10768 282 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 LINC01551Q86U37 167 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 AKAP14Q86UN6 197 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 SPACA4Q8TDM5 124 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 BIN3Q9NQY0 253 aa3.47□□□□□ -1.85
PHTF1-211ENST00000486855 CSDC2Q9Y534 153 aaKnown RBP3.47□□□□□ -1.85
PHTF1-211ENST00000486855 LPAP08519 4548 aa3.46□□□□□ -1.86
PHTF1-211ENST00000486855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.46□□□□□ -1.86
PHTF1-211ENST00000486855 A0A087WYN8 130 aa3.46□□□□□ -1.86
PHTF1-211ENST00000486855 GVQW2A0A096LPI5 108 aaPredicted RBP3.46□□□□□ -1.86
PHTF1-211ENST00000486855 IGKV2-29A2NJV5 120 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms