RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 Q6ZTI0 123 aa12.9□□□□□ -0.34
PDLIM7-207ENST00000486828 FAM110AQ9BQ89 295 aa12.9□□□□□ -0.34
PDLIM7-207ENST00000486828 TRAV8-3A0A0A6YYJ7 113 aa12.9□□□□□ -0.35
PDLIM7-207ENST00000486828 A0A1B0GV72 72 aa12.9□□□□□ -0.35
PDLIM7-207ENST00000486828 INAFM1C9JVW0 142 aa12.9□□□□□ -0.35
PDLIM7-207ENST00000486828 IGLV1-51P01701 117 aa12.9□□□□□ -0.35
PDLIM7-207ENST00000486828 GIG44P09565 113 aaPredicted RBP12.9□□□□□ -0.35
PDLIM7-207ENST00000486828 LYRM7Q5U5X0 104 aa12.9□□□□□ -0.35
PDLIM7-207ENST00000486828 ZNF418Q8TF45 676 aaPredicted RBP12.9□□□□□ -0.35
PDLIM7-207ENST00000486828 TRAV4A0A0B4J268 109 aa12.89□□□□□ -0.35
PDLIM7-207ENST00000486828 LOC107984156A0A0G2JMH3 177 aa12.89□□□□□ -0.35
PDLIM7-207ENST00000486828 TRBV10-1A0A0K0K1A3 114 aa12.89□□□□□ -0.35
PDLIM7-207ENST00000486828 A4D1N5 150 aa12.89□□□□□ -0.35
PDLIM7-207ENST00000486828 K7EQD1 137 aa12.89□□□□□ -0.35
PDLIM7-207ENST00000486828 HILS1P60008 231 aa12.89□□□□□ -0.35
PDLIM7-207ENST00000486828 ARL17AQ8IVW1 177 aa12.89□□□□□ -0.35
PDLIM7-207ENST00000486828 PRO1854Q9UHT4 67 aa12.89□□□□□ -0.35
PDLIM7-207ENST00000486828 RPL36AP83881 106 aaKnown RBP12.88□□□□□ -0.35
PDLIM7-207ENST00000486828 RPL36ALQ969Q0 106 aaKnown RBP12.88□□□□□ -0.35
PDLIM7-207ENST00000486828 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
PDLIM7-207ENST00000486828 ADARB2-AS1A8MUL3 147 aa12.88□□□□□ -0.35
PDLIM7-207ENST00000486828 MUSTN1Q8IVN3 82 aa12.88□□□□□ -0.35
PDLIM7-207ENST00000486828 C19orf73Q9NVV2 129 aa12.88□□□□□ -0.35
PDLIM7-207ENST00000486828 DAZ2Q13117 558 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-207ENST00000486828 SFTA2Q6UW10 78 aa12.87□□□□□ -0.35
PDLIM7-207ENST00000486828 GEMIN7Q9H840 131 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-207ENST00000486828 JMJD1CQ15652 2540 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 NDUFA7O95182 113 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 TIRAPP58753 221 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 MTURNQ8N3F0 131 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 LITAFQ99732 161 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 WFDC10AQ9H1F0 79 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 NDUFA12Q9UI09 145 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 A0A0B4J2C4 111 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 PSMB2P49721 201 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 DGAT2L7PQ6IED9 249 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 C16orf74Q96GX8 76 aa12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 NOP10Q9NPE3 64 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-207ENST00000486828 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
PDLIM7-207ENST00000486828 EIF4EBP3O60516 100 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-207ENST00000486828 ETDBQ3ZM63 59 aa12.85□□□□□ -0.35
PDLIM7-207ENST00000486828 SH2D6Q7Z4S9 175 aa12.85□□□□□ -0.35
PDLIM7-207ENST00000486828 DAZ4Q86SG3 579 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-207ENST00000486828 DAZ3Q9NR90 486 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-207ENST00000486828 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-207ENST00000486828 PLAC8L1A1L4L8 177 aa12.84□□□□□ -0.35
PDLIM7-207ENST00000486828 RPL35AP18077 110 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-207ENST00000486828 C1QTNF4Q9BXJ3 329 aa12.84□□□□□ -0.35
PDLIM7-207ENST00000486828 TRBV20-1A0A075B6N2 111 aa12.83□□□□□ -0.36
PDLIM7-207ENST00000486828 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.36
PDLIM7-207ENST00000486828 NTM-AS1Q6ZSK4 140 aa12.83□□□□□ -0.36
PDLIM7-207ENST00000486828 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
PDLIM7-207ENST00000486828 SPANXCQ9NY87 97 aa12.83□□□□□ -0.36
PDLIM7-207ENST00000486828 CDKN2A-AS1Q9UH64 79 aa12.83□□□□□ -0.36
PDLIM7-207ENST00000486828 CSDC2Q9Y534 153 aaKnown RBP12.83□□□□□ -0.36
PDLIM7-207ENST00000486828 SETD2Q9BYW2 2564 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-207ENST00000486828 A8MZ25 164 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 CRLF1O75462 422 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 IGHV3-33P01772 117 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 LINC00694P0DN24 101 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 CSNK1G2-AS1Q8NCQ2 148 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 J3QR89 54 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 TCL1BO95988 128 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 GAGE4Q13068 117 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 GAGE5Q13069 117 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 SBSPONQ8IVN8 264 aa12.82□□□□□ -0.36
PDLIM7-207ENST00000486828 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
PDLIM7-207ENST00000486828 FAM19A3Q7Z5A8 133 aa12.81□□□□□ -0.36
PDLIM7-207ENST00000486828 HERVK_113P63121 156 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 OVOL2Q9BRP0 275 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 ERG28Q9UKR5 140 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 GAGE7O76087 117 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 GAGE12IP0CL82 117 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 COX6A2Q02221 97 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 ADAMTSL4-AS1Q5T5F5 129 aa12.8□□□□□ -0.36
PDLIM7-207ENST00000486828 TRGV2A0A075B6R0 118 aa12.79□□□□□ -0.36
PDLIM7-207ENST00000486828 SMAGPQ0VAQ4 97 aa12.79□□□□□ -0.36
PDLIM7-207ENST00000486828 MIAQ16674 131 aa12.79□□□□□ -0.36
PDLIM7-207ENST00000486828 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
PDLIM7-207ENST00000486828 TMEM101Q96IK0 257 aa12.79□□□□□ -0.36
PDLIM7-207ENST00000486828 TIMM17BO60830 172 aa12.78□□□□□ -0.36
PDLIM7-207ENST00000486828 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
PDLIM7-207ENST00000486828 GTSF1LQ9H1H1 148 aa12.78□□□□□ -0.36
PDLIM7-207ENST00000486828 PRSS2P07478 247 aa12.78□□□□□ -0.36
PDLIM7-207ENST00000486828 ATP6V0E2Q8NHE4 81 aa12.78□□□□□ -0.36
PDLIM7-207ENST00000486828 C2CD3Q4AC94 2353 aa12.78□□□□□ -0.36
PDLIM7-207ENST00000486828 TRBV6-4A0A1B0GX49 114 aa12.77□□□□□ -0.37
PDLIM7-207ENST00000486828 NDUFA1O15239 70 aa12.77□□□□□ -0.37
PDLIM7-207ENST00000486828 IGLV5-39A0A0G2JS06 123 aa12.76□□□□□ -0.37
PDLIM7-207ENST00000486828 CDC42SE2Q9NRR3 84 aa12.76□□□□□ -0.37
PDLIM7-207ENST00000486828 KRTAP10-3P60369 221 aa12.76□□□□□ -0.37
PDLIM7-207ENST00000486828 H7C2G1 150 aa12.75□□□□□ -0.37
PDLIM7-207ENST00000486828 TMEM243Q9BU79 118 aa12.75□□□□□ -0.37
PDLIM7-207ENST00000486828 RNF183Q96D59 192 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms