RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 SCGB1D1O95968 90 aa9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 LGALS9CQ6DKI2 356 aa9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 TEX43Q6ZNM6 134 aa9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 ZNF664Q8N3J9 261 aa9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 AMELXQ99217 191 aa9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 CST9LQ9H4G1 147 aa9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 CDC42SE2Q9NRR3 84 aa9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 PRKDCP78527 4128 aaKnown RBP9.11□□□□□ -0.95
VTI1BP1-201ENST00000486325 PRSS29PA6NIE9 313 aa9.1□□□□□ -0.95
VTI1BP1-201ENST00000486325 H0Y8G0 127 aa9.1□□□□□ -0.95
VTI1BP1-201ENST00000486325 RBX1P62877 108 aa9.1□□□□□ -0.95
VTI1BP1-201ENST00000486325 LINC01545Q5VT33 79 aa9.1□□□□□ -0.95
VTI1BP1-201ENST00000486325 MUC7Q8TAX7 377 aa9.1□□□□□ -0.95
VTI1BP1-201ENST00000486325 MRPS16Q9Y3D3 137 aaKnown RBP9.1□□□□□ -0.95
VTI1BP1-201ENST00000486325 OPRPNQ99935 248 aaPredicted RBP9.09□□□□□ -0.95
VTI1BP1-201ENST00000486325 CHTOPQ9Y3Y2 248 aaKnown RBP9.09□□□□□ -0.95
VTI1BP1-201ENST00000486325 ODF1Q14990 250 aa9.08□□□□□ -0.96
VTI1BP1-201ENST00000486325 FAM104AQ969W3 186 aa9.08□□□□□ -0.96
VTI1BP1-201ENST00000486325 LINC00588Q9Y4M8 146 aa9.08□□□□□ -0.96
VTI1BP1-201ENST00000486325 IGLV4-60A0A075B6I1 120 aa9.07□□□□□ -0.96
VTI1BP1-201ENST00000486325 F8VRH5 84 aa9.07□□□□□ -0.96
VTI1BP1-201ENST00000486325 CCL25O15444 150 aa9.07□□□□□ -0.96
VTI1BP1-201ENST00000486325 SEC11AP67812 179 aa9.07□□□□□ -0.96
VTI1BP1-201ENST00000486325 MPV17L2Q567V2 206 aa9.07□□□□□ -0.96
VTI1BP1-201ENST00000486325 PYY3Q5JQD4 70 aa9.07□□□□□ -0.96
VTI1BP1-201ENST00000486325 Q6ZUT4 128 aa9.07□□□□□ -0.96
VTI1BP1-201ENST00000486325 UPK3BQ9BT76 320 aa9.07□□□□□ -0.96
VTI1BP1-201ENST00000486325 DPM2O94777 84 aa9.06□□□□□ -0.96
VTI1BP1-201ENST00000486325 SMIM6P0DI80 62 aa9.06□□□□□ -0.96
VTI1BP1-201ENST00000486325 PLNP26678 52 aa9.06□□□□□ -0.96
VTI1BP1-201ENST00000486325 Q8N976 141 aa9.06□□□□□ -0.96
VTI1BP1-201ENST00000486325 K7EP13 123 aa9.05□□□□□ -0.96
VTI1BP1-201ENST00000486325 SIVA1O15304 175 aa9.05□□□□□ -0.96
VTI1BP1-201ENST00000486325 ANGP03950 147 aaKnown RBP9.05□□□□□ -0.96
VTI1BP1-201ENST00000486325 LINC01556Q5JQF7 62 aa9.05□□□□□ -0.96
VTI1BP1-201ENST00000486325 ZFAND6Q6FIF0 208 aa9.05□□□□□ -0.96
VTI1BP1-201ENST00000486325 WFDC10BQ8IUB3 73 aa9.05□□□□□ -0.96
VTI1BP1-201ENST00000486325 UBE2DNLQ8IWF7 75 aa9.05□□□□□ -0.96
VTI1BP1-201ENST00000486325 MRPL35Q9NZE8 188 aaKnown RBP9.05□□□□□ -0.96
VTI1BP1-201ENST00000486325 TRAV9-2A0A087WT02 112 aa9.04□□□□□ -0.96
VTI1BP1-201ENST00000486325 C3orf84H3BNL1 204 aa9.04□□□□□ -0.96
VTI1BP1-201ENST00000486325 IGKCP01834 107 aa9.04□□□□□ -0.96
VTI1BP1-201ENST00000486325 DNAH10OSP0CZ25 163 aa9.04□□□□□ -0.96
VTI1BP1-201ENST00000486325 UBE2D1P51668 147 aa9.04□□□□□ -0.96
VTI1BP1-201ENST00000486325 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
VTI1BP1-201ENST00000486325 ZC2HC1BQ5TFG8 222 aa9.04□□□□□ -0.96
VTI1BP1-201ENST00000486325 FAM19A3Q7Z5A8 133 aa9.04□□□□□ -0.96
VTI1BP1-201ENST00000486325 TINCRA0A1B0GVN0 87 aa9.03□□□□□ -0.96
VTI1BP1-201ENST00000486325 S100A12P80511 92 aa9.03□□□□□ -0.96
VTI1BP1-201ENST00000486325 SS18Q15532 418 aa9.03□□□□□ -0.96
VTI1BP1-201ENST00000486325 NFE4Q86UQ8 179 aa9.03□□□□□ -0.96
VTI1BP1-201ENST00000486325 LINC00269Q8N2A0 174 aa9.03□□□□□ -0.96
VTI1BP1-201ENST00000486325 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
VTI1BP1-201ENST00000486325 Q9H8V8 135 aa9.03□□□□□ -0.96
VTI1BP1-201ENST00000486325 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 HSBP1L1C9JCN9 74 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 IGHV3-30P01768 117 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 IGHV3-33P01772 117 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 IGLC3P0DOY3 106 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 IGHV3-30-3P0DP02 117 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 IGHV3-30-5P0DP03 117 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 REG3AQ06141 175 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 C10orf126Q8N4M7 172 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 GEMIN7Q9H840 131 aaKnown RBP9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 KLK12Q9UKR0 248 aa9.02□□□□□ -0.97
VTI1BP1-201ENST00000486325 IGLV4-69A0A075B6H9 119 aa9.01□□□□□ -0.97
VTI1BP1-201ENST00000486325 TRAV8-4A0A0B4J246 113 aa9.01□□□□□ -0.97
VTI1BP1-201ENST00000486325 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
VTI1BP1-201ENST00000486325 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
VTI1BP1-201ENST00000486325 CRPP02741 224 aa9.01□□□□□ -0.97
VTI1BP1-201ENST00000486325 HERVK_113P63121 156 aa9.01□□□□□ -0.97
VTI1BP1-201ENST00000486325 PRR34Q9NV39 138 aa9.01□□□□□ -0.97
VTI1BP1-201ENST00000486325 TGP01266 2768 aa9□□□□□ -0.97
VTI1BP1-201ENST00000486325 LINC00242Q5T6M2 205 aa9□□□□□ -0.97
VTI1BP1-201ENST00000486325 IGKV3OR2-268A0A0C4DH90 116 aa8.99□□□□□ -0.97
VTI1BP1-201ENST00000486325 C11orf86A6NJI1 115 aa8.99□□□□□ -0.97
VTI1BP1-201ENST00000486325 H3BRM9 83 aa8.99□□□□□ -0.97
VTI1BP1-201ENST00000486325 MIAQ16674 131 aa8.99□□□□□ -0.97
VTI1BP1-201ENST00000486325 LINC00518Q8N0U6 118 aa8.99□□□□□ -0.97
VTI1BP1-201ENST00000486325 CHAC1Q9BUX1 264 aa8.99□□□□□ -0.97
VTI1BP1-201ENST00000486325 VAMP8Q9BV40 100 aa8.99□□□□□ -0.97
VTI1BP1-201ENST00000486325 TRAV8-3A0A0A6YYJ7 113 aa8.98□□□□□ -0.97
VTI1BP1-201ENST00000486325 HERVK_113P61574 105 aa8.98□□□□□ -0.97
VTI1BP1-201ENST00000486325 CASC10Q5T4H9 136 aa8.98□□□□□ -0.97
VTI1BP1-201ENST00000486325 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
VTI1BP1-201ENST00000486325 ATOH7Q8N100 152 aa8.98□□□□□ -0.97
VTI1BP1-201ENST00000486325 Q8N3U1 123 aa8.98□□□□□ -0.97
VTI1BP1-201ENST00000486325 UBE2WQ96B02 151 aa8.98□□□□□ -0.97
VTI1BP1-201ENST00000486325 C12orf57Q99622 126 aa8.98□□□□□ -0.97
VTI1BP1-201ENST00000486325 IGLV5-45A0A087WSX0 123 aa8.97□□□□□ -0.97
VTI1BP1-201ENST00000486325 IBA57-AS1B1ANH7 110 aa8.97□□□□□ -0.97
VTI1BP1-201ENST00000486325 ENHOQ6UWT2 76 aa8.97□□□□□ -0.97
VTI1BP1-201ENST00000486325 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
VTI1BP1-201ENST00000486325 ZNF22P17026 224 aaPredicted RBP8.96□□□□□ -0.98
VTI1BP1-201ENST00000486325 CLPSL2Q6UWE3 100 aa8.96□□□□□ -0.98
VTI1BP1-201ENST00000486325 CD164L2Q6UWJ8 174 aa8.96□□□□□ -0.98
VTI1BP1-201ENST00000486325 CHCHD10Q8WYQ3 142 aaPredicted RBP8.96□□□□□ -0.98
VTI1BP1-201ENST00000486325 COX6A2Q02221 97 aa8.95□□□□□ -0.98
VTI1BP1-201ENST00000486325 TTC32Q5I0X7 151 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms