RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.06
PKP4-213ENST00000486254 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
PKP4-213ENST00000486254 VWFP04275 2813 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 A0A1B0GWB2 263 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 GAGE12JA6NER3 117 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 EMP1P54849 157 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 GAGE4Q13068 117 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 GAGE5Q13069 117 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 KRTAP24-1Q3LI83 254 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 GAGE13Q4V321 117 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 DGAT2L7PQ6IED9 249 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 SHISA2Q6UWI4 295 aa8.45□□□□□ -1.06
PKP4-213ENST00000486254 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
PKP4-213ENST00000486254 GCSHP23434 173 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 FXYD2P54710 66 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 HERVK_113P63121 156 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 EGFEM1PQ0D2K5 195 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 HIST1H4GQ99525 98 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 A0A0J9YY99 117 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 TEX48A0A1B0GUV7 120 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 TMEM238LA0A1B0GVL6 79 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 A6NJY4 79 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 UBE2V1Q13404 147 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 CEMP1Q6PRD7 247 aaPredicted RBP8.44□□□□□ -1.06
PKP4-213ENST00000486254 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 PRO0255Q9UI72 69 aa8.44□□□□□ -1.06
PKP4-213ENST00000486254 SMIM13P0DJ93 91 aa8.43□□□□□ -1.06
PKP4-213ENST00000486254 Q8NAQ8 132 aa8.43□□□□□ -1.06
PKP4-213ENST00000486254 RNF183Q96D59 192 aa8.43□□□□□ -1.06
PKP4-213ENST00000486254 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
PKP4-213ENST00000486254 TRBV6-8A0A0A6YYG3 113 aa8.42□□□□□ -1.06
PKP4-213ENST00000486254 DEFB135Q30KP9 77 aa8.42□□□□□ -1.06
PKP4-213ENST00000486254 VSIG2Q96IQ7 327 aa8.42□□□□□ -1.06
PKP4-213ENST00000486254 GEMIN7Q9H840 131 aaKnown RBP8.42□□□□□ -1.06
PKP4-213ENST00000486254 UBE2L6O14933 153 aa8.41□□□□□ -1.06
PKP4-213ENST00000486254 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
PKP4-213ENST00000486254 IGHV4-30-4P0DP06 118 aa8.41□□□□□ -1.06
PKP4-213ENST00000486254 PTTG1IPP53801 180 aa8.41□□□□□ -1.06
PKP4-213ENST00000486254 FAM222AQ5U5X8 452 aa8.41□□□□□ -1.06
PKP4-213ENST00000486254 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
PKP4-213ENST00000486254 TRAV26-1A0A087WT03 109 aa8.4□□□□□ -1.06
PKP4-213ENST00000486254 IGHV4-28A0A0C4DH34 117 aa8.4□□□□□ -1.06
PKP4-213ENST00000486254 IGLV5-39A0A0G2JS06 123 aa8.4□□□□□ -1.06
PKP4-213ENST00000486254 DEFB130BP0DP73 79 aa8.4□□□□□ -1.06
PKP4-213ENST00000486254 DEFB130AP0DP74 79 aa8.4□□□□□ -1.06
PKP4-213ENST00000486254 AMMECR1LQ6DCA0 310 aa8.4□□□□□ -1.06
PKP4-213ENST00000486254 TMEM238C9JI98 176 aa8.39□□□□□ -1.07
PKP4-213ENST00000486254 VAMP3Q15836 100 aa8.39□□□□□ -1.07
PKP4-213ENST00000486254 LINC00242Q5T6M2 205 aa8.39□□□□□ -1.07
PKP4-213ENST00000486254 ZFAND6Q6FIF0 208 aa8.39□□□□□ -1.07
PKP4-213ENST00000486254 Q6ZVH6 145 aa8.39□□□□□ -1.07
PKP4-213ENST00000486254 LOC100131303A0A0U1RQF7 123 aa8.39□□□□□ -1.07
PKP4-213ENST00000486254 TIMM17BO60830 172 aa8.39□□□□□ -1.07
PKP4-213ENST00000486254 C3orf56Q8N813 242 aa8.39□□□□□ -1.07
PKP4-213ENST00000486254 A0A1B0GUV1 79 aa8.38□□□□□ -1.07
PKP4-213ENST00000486254 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
PKP4-213ENST00000486254 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
PKP4-213ENST00000486254 SRSF9Q13242 221 aaKnown RBP eCLIP8.38□□□□□ -1.07
PKP4-213ENST00000486254 C12orf74Q32Q52 190 aa8.38□□□□□ -1.07
PKP4-213ENST00000486254 RNASE13Q5GAN3 156 aaKnown RBP8.38□□□□□ -1.07
PKP4-213ENST00000486254 SH2D6Q7Z4S9 175 aa8.38□□□□□ -1.07
PKP4-213ENST00000486254 ATP6V0E2Q8NHE4 81 aa8.38□□□□□ -1.07
PKP4-213ENST00000486254 NHP2Q9NX24 153 aaKnown RBP8.38□□□□□ -1.07
PKP4-213ENST00000486254 LOC100996750A0A140TA64 210 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 ATP5G1P05496 136 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 SPART-AS1P0CW21 52 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 GYPEP15421 78 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 DAD1P61803 113 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 GTF2H5Q6ZYL4 71 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 C10orf126Q8N4M7 172 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 KRTAP4-6Q9BYQ5 205 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
PKP4-213ENST00000486254 K7EP13 123 aa8.36□□□□□ -1.07
PKP4-213ENST00000486254 CCL25O15444 150 aa8.36□□□□□ -1.07
PKP4-213ENST00000486254 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
PKP4-213ENST00000486254 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 H3BUT2 72 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 K7EP34 96 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 NDUFA1O15239 70 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 PAX4O43316 350 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 FABP2P12104 132 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 SPANXDQ9BXN6 97 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 PPDPFQ9H3Y8 114 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 SPANXCQ9NY87 97 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 BAHCC1Q9P281 2608 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 TRAV8-3A0A0A6YYJ7 113 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 SMIM1B2RUZ4 78 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 F5H768 121 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 LITAFQ99732 161 aa8.35□□□□□ -1.07
PKP4-213ENST00000486254 SPINK8P0C7L1 97 aa8.34□□□□□ -1.07
PKP4-213ENST00000486254 RPL24P83731 157 aaKnown RBP8.34□□□□□ -1.07
PKP4-213ENST00000486254 CHCHD5Q9BSY4 110 aa8.34□□□□□ -1.07
PKP4-213ENST00000486254 C11orf68Q9H3H3 251 aaKnown RBP8.34□□□□□ -1.07
PKP4-213ENST00000486254 GAGE10A6NGK3 116 aa8.33□□□□□ -1.08
PKP4-213ENST00000486254 IGLL5B9A064 214 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms